New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4773304 = | 75 (1.050) | 5 (0.070) | 4/258 | NT | 7.0% | coding (5963/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
? | NC_002947 | 4773349 = | 60 (0.870) | coding (5918/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
TGGCGACCTGGCGCGCTATCGCCCGGACGGTGTGATCGATTACGCCGGGCGTATCGACCACCAGGTAAAAATTCGCGGCCTGCGTATCGAGCTGGGTGAGATCGAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4773453‑4773304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGGCA > NC_002947/4773349‑4773496 TGGCGACCTGGCGCGCTATCGCCCGGACGGTGTGATCGATTACGCCGGGCGTATCGACCACCAGGTAAAAATTCGCGGCCTGCGTATCGAGCTGGGTGAGATCGAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGC > 2:288158/1‑149 AAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATAAGCCCGGCGTAATCGAGCACACCGTCCGGGCGATAGCGCGCCAGGTCGC > 8:103094/1‑149 AAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATAAGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGC > 8:252231/1‑149 GCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCA < 7:252231/149‑1 GACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACC < 5:391119/117‑1 GACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACC > 6:391119/1‑117 TGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGG > 3:222992/1‑149 CTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTTCCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGGC < 5:370953/149‑1 CTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGG > 2:268672/1‑148 CTTCGATCCCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGGC < 4:110082/149‑1 TTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGGCA > 7:75289/1‑149 TGGCGACCTGGCGCGCTATCGCCCGGACGGTGTGATCGATTACGCCGGGCGTATCGACCACCAGGTAAAAATTCGCGGCCTGCGTATCGAGCTGGGTGAGATCGAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4773453‑4773304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGGCA > NC_002947/4773349‑4773496 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |