New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4800284	65 (0.910)	4 (0.060)	4/252	NT	6.3%	coding (154/471 nt)	PP_4227	hypothetical protein
	?	NC_002947	= 4800324	57 (0.850)					coding (114/471 nt)	PP_4227	hypothetical protein

ACCTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4800130‑4800284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatctgGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGGGCGGGGAGGC  <  NC_002947/4800324‑4800181                                                                                                                                                                                                                                                                                                             ACCTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACA                                                                                                                                                         >  4:183620/1‑148   CTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCA                                                                                                                                                      >  5:192909/1‑149   CTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCA                                                                                                                                                      >  6:38199/1‑149   CTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCA                                                                                                                                                      >  7:175943/1‑149   CTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGCTCGAGGGAGAACATC                                                                                                                                                       >  2:366950/1‑148     GACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATC                                                                                                                                                    >  7:298922/1‑149      ACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATC                                                                                                                                                    <  5:38199/148‑1       CAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTG                                                                                                                                                  <  1:371007/149‑1       CAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTG                                                                                                                                                  <  2:178000/149‑1             ATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTGGGCGCT                                                                                                                                            >  1:212276/1‑149                                                     CCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATG                                                                                                    <  2:212276/149‑1                                                         CCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATG                                                                                                 <  6:82799/148‑1                                                             CCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTC                                                                                            <  5:100714/149‑1                                                                                                                                                     TCATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGGGCGGGGAG    >  8:72944/1‑149                                                                                                                                                     TCATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGGGCGGGGAG    >  5:35708/1‑149                                                                                                                                                      CATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGCGCGGGGAGG   >  8:258377/1‑149                                                                                                                                                       ATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGGGCGGGGAGGC  >  8:53419/1‑149                                                                                                                                                       ATCTGGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGGGCGGGGAGG   <  2:309064/148‑1                                                                                                                                                                                                                                                                                                             ACCTGACAGGCCATGCCATCCGGTACGCTGAACTGGTCGGCGGAAAAATGCGCCTCCCCGCCCTTGGCGGTCAGCGGCTGCGGCAACTGGTCGATCAGCCCGGCGACCATACGCGCCGACGCCGCCAGGCGCTGGTCGAGGGAGAACATCATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4800130‑4800284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatctgGGCGCTGGCCGCGGCGTGGATGCTGCGTGACCTGCGCCAGCAGATGATGTTCTCCCTCGACCAGCGCCTGGCGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTGACCGCCAAGGGCGGGGAGGC  <  NC_002947/4800324‑4800181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.