New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5345668 =	72 (1.010)	4 (0.060)	4/260	NT	5.1%	coding (1066/1935 nt)	acsA‑II	acetyl‑CoA synthetase
	?	NC_002947	5345743 =	80 (1.150)					coding (1141/1935 nt)	acsA‑II	acetyl‑CoA synthetase

ACAATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5345819‑5345668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAAACCGGCGGCATCATGCTCACCCCACTGCCCGG  >  NC_002947/5345743‑5345873                                                                                                                                                                                                                                                                                             ACAATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAG                                                                                                                                        >  4:223876/1‑149   AATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGG                                                                                                                                      >  1:410619/1‑149   AATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGG                                                                                                                                      >  4:266283/1‑149   AATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGG                                                                                                                                      <  4:415782/149‑1                                                                            CTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCC                                                              >  3:11031/1‑148                                                                                                    CGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACC                                     >  5:379422/1‑149                                                                                                        AGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAA                                  <  4:11031/148‑1                                                                                                                                       CATCAGTGCGCGCAGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAAACCGGCGGCATCATGCTCACCCCACTGCCCGG  <  6:379422/149‑1                                                                                                                                                                                                                                                                                             ACAATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATCAGTGCGCGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5345819‑5345668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAAACCGGCGGCATCATGCTCACCCCACTGCCCGG  >  NC_002947/5345743‑5345873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.