New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 547679074 (1.030)4 (0.060) 4/260 NT 5.0% coding (1020/1317 nt) PP_4813 PAP2 family protein/DedA family protein
?NC_002947 = 5476814 79 (1.140)coding (1044/1317 nt) PP_4813 PAP2 family protein/DedA family protein

ATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5476641‑5476790
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  NC_002947/5476814‑5476667
                                                                                                                                                                                                                                                                                                          
ATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGC                                                                                                                                                       >  8:371218/1‑149
 TGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCG                                                                                                                                                      <  8:309634/149‑1
                          ACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCC                                                                                                                             <  1:253345/149‑1
                                 TGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGTTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTA                                                                                                                      <  1:103497/149‑1
                                                                                CAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCC                                                                                                                 >  7:292940/1‑107
                                                                                CAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCC                                                                                                                 <  8:292940/107‑1
                                                                                                                                                   GCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCA    <  7:408428/149‑1
                                                                                                                                                   GCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGGAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTT      >  2:235959/1‑147
                                                                                                                                                     GCATGCGTGGTGGCTGCCCACGCCGCGCCAGTACGGCCATGACCATGAATAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCGATTTCAGT  <  2:181049/149‑1
                                                                                                                                                                                                                                                                                                          
ATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5476641‑5476790
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  NC_002947/5476814‑5476667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.