New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5868146	66 (0.920)	4 (0.060)	4/254	NT	6.1%	coding (418/807 nt)	lgt	prolipoprotein diacylglyceryl transferase
	?	NC_002947	= 5868165	61 (0.900)					coding (399/807 nt)	lgt	prolipoprotein diacylglyceryl transferase

AGGATGACGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5867992‑5868146 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgatTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCGCAGCTCTACCAGTTCGCCCTT  <  NC_002947/5868165‑5868018                                                                                                                                                                                                                                                                                                                  AGGATGACGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTT                                                                                                                                                            <  3:106158/149‑1   GATGACGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGC                                                                                                                                                          <  2:251940/149‑1     ctACGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGTAGGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGC                                                                                                                                                          <  1:66345/146‑1       ACGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGA                                                                                                                                                       <  2:423305/148‑1        CGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGC                                                                                                                                                          >  2:66345/1‑144                                      GGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTT                                                                                                                        <  4:53436/148‑1                                      GGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTT                                                                                                                        >  3:53436/1‑148                                       GTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCA                                                                                                                      <  2:128947/149‑1                                          GAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATC                                                                                                                    <  3:384713/148‑1                                                                                                                                                      TGCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCTACCCATCGCAGCTCTACCAGTTC        <  4:201632/149‑1                                                                                                                                                       GCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCGCAGCTCTACCAGTTCG       <  3:241614/149‑1                                                                                                                                                       GCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCG                       >  3:2858/1‑133                                                                                                                                                       GCCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCG                       <  4:2858/133‑1                                                                                                                                                        CCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCGC                      <  2:321592/133‑1                                                                                                                                                        CCGATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACAGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCGC                      >  1:321592/1‑133                                                                                                                                                           ATTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACAGTGGGGCAAACCCACCGCCGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCCCCCATCGCAGCTCTACCAGTTCGCCCg   >  1:313984/1‑148                                                                                                                                                            TTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCGCAGCTCTACCAGTTCGCCCTT  >  7:223649/1‑149                                                                                                                                                                                                                                                                                                                  AGGATGACGAACAGCGCCACGCCCTCAAGGGCGAACTGGTAGAGCTGCGATGGGTGGCGCGGCAACTGGGCCGGGTCGCTGAACGGCGGGAAGATCATCGCCCATGGGACGTCGGT‑GGGTTTGCCCCACAGTTCGGCGTTGATGAAGTTGCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5867992‑5868146 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgatTGGCCTGGGGGCCGGGCGTATCGGCAACTTCATCAACGCCGAACTGTGGGGCAAACCCACCGACGTCCCATGGGCGATGATCTTCCCGCCGTTCAGCGACCCGGCCCAGTTGCCGCGCCACCCATCGCAGCTCTACCAGTTCGCCCTT  <  NC_002947/5868165‑5868018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.