New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5896614 = | 78 (1.090) | 6 (0.090) | 4/256 | NT | 7.6% | coding (775/1029 nt) | sbp‑II | sulfate ABC transporter substrate‑binding protein |
? | NC_002947 | 5896653 = | 71 (1.040) | coding (736/1029 nt) | sbp‑II | sulfate ABC transporter substrate‑binding protein |
ATCACCTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5896767‑5896614 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacaGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACC > NC_002947/5896653‑5896798 ATCACCTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT > 3:330934/1‑149 ACCTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCG < 6:7508/148‑1 CCTTCGTCAACAATGGCCAGGCCCACGTTTTGCTGGCCTGGTAAAACGAAGCCTTCCGGGCCCTGACGCAAGACGGTGGTGCCAACAAGTTCGTGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCCGTGGCCGGGGTCGAC < 4:377115/149‑1 TTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGAC > 7:250128/1‑147 CAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT > 7:304006/1‑128 CAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT < 8:304006/128‑1 CGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGATGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT < 2:241800/120‑1 CGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT > 1:241800/1‑120 GTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGA > 5:244345/1‑149 CTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACG > 7:16795/1‑147 CTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACG > 7:23239/1‑147 TGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAG > 2:432482/1‑149 gcgtTCCTGGCCGTGCGGCCTGTGCCCGTTGCCCACTGCTACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAG < 6:244345/143‑1 TCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATG < 1:432482/149‑1 ACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACC > 4:253604/1‑149 ATCACCTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5896767‑5896614 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacaGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACC > NC_002947/5896653‑5896798 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |