| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6070727 = | 73 (1.020) | 4 (0.060) | 4/258 | NT | 5.4% | intergenic (‑83/+80) | PP_5324/phoU | two‑component system response regulator/phosphate transport‑associated protein |
| ? | NC_002947 | 6070765 = | 71 (1.030) | intergenic (‑121/+42) | PP_5324/phoU | two‑component system response regulator/phosphate transport‑associated protein | |||||
CAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6070877‑6070727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgaAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTC > NC_002947/6070765‑6070911 CAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAAC < 1:50415/149‑1CAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAAC < 8:198259/149‑1 GAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGA > 3:263029/1‑149 GCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCCCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGA < 5:131714/136‑1 GCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCCCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGA > 6:131714/1‑136 GTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCA > 1:187700/1‑149 CGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCT > 4:303760/1‑149 CGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCTGGAGCAACCTTACATATCGTCAGAATCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGT > 1:299625/1‑149 GAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTC > 4:256242/1‑149 CAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGAGCCGGCAGGCACCCGCGAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6070877‑6070727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgaAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTC > NC_002947/6070765‑6070911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |