New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6096455 | 101 (1.410) | 6 (0.090) | 5/252 | NT | 6.0% | coding (243/1416 nt) | pycA | pyruvate carboxylase subunit A |
? | NC_002947 | = 6096480 | 93 (1.380) | coding (218/1416 nt) | pycA | pyruvate carboxylase subunit A |
GCCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6096302‑6096455 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaaaccgGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGCAC < NC_002947/6096480‑6096336 GCCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGG > 2:10399/1‑148 CCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAA > 6:126456/1‑149 CGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAAC > 5:438371/1‑149 GATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGG > 6:246643/1‑149 CGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTC < 3:268135/149‑1 CGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTC < 5:246643/149‑1 CGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTT < 4:181246/149‑1 CCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTC < 5:163022/133‑1 CCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTC > 6:163022/1‑133 AAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGC > 5:126456/1‑149 ACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGCAC > 1:10399/1‑149 GCCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6096302‑6096455 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaaaccgGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGCAC < NC_002947/6096480‑6096336 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |