New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 44995575 (1.050)4 (0.060) 4/252 NT 5.2% coding (1126/1779 nt) PP_0370 acyl‑CoA dehydrogenase family protein
?NC_002947 = 450000 74 (1.100)coding (1171/1779 nt) PP_0370 acyl‑CoA dehydrogenase family protein

CCGGCCGGCCCACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATGGTTACATTCGTGA  >  NC_002947/449811‑450103
                                                                                                                                                 |                                                                                                                                                    
ccggccggCCCTCAATCCAAGGACTAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTa                                                                                                                                                  <  8:344207/149‑1 (MQ=255)
   gccggccCACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAg                                                                                                                                               <  8:181675/149‑1 (MQ=255)
     cggccCACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGc                                                                                                                                              >  4:245038/1‑148 (MQ=255)
       gccCACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCg                                                                                                                                             >  3:39165/1‑147 (MQ=255)
       gccCACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGaa                                                                                                                                           <  4:419719/149‑1 (MQ=255)
       gccCACAAGCCAAGCACAAGGCGGCCGACCCGATCAGCGCCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGaa                                                                                                                                           <  8:310382/149‑1 (MQ=255)
         ccACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAgg                                                                                                                                         >  8:302014/1‑148 (MQ=255)
         ccACAAGCCAAGGACAAGGCTGCCGACCCGAACATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGa                                                                                                                                         >  1:47787/1‑149 (MQ=255)
                ccAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTACACTTATGTGGCCATGCAACTGGACAGTGCAAAGTACAGCGAAGACGCCAGc                                                                                                                                  >  2:115891/1‑149 (MQ=255)
                ccAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTATCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGc                                                                                                                                  >  4:138816/1‑149 (MQ=255)
                    ggACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTgc                                                                                                                              <  2:47787/149‑1 (MQ=255)
                          ggCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAAc                                                                                                                        >  7:390827/1‑149 (MQ=255)
                               ccGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTgcg                                                                                                                             >  4:236068/1‑139 (MQ=255)
                               ccGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTgcg                                                                                                                             <  3:236068/139‑1 (MQ=255)
                               ccGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGc                                                                                                                   <  7:4515/149‑1 (MQ=255)
                               ccGACCCGATCACCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGc                                                                                                                   >  4:237398/1‑149 (MQ=255)
                                cGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGc                                                                                                                   >  6:408594/1‑148 (MQ=255)
                                cGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGc                                                                                                                   >  3:131294/1‑148 (MQ=255)
                                    ccGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCACGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGaa                                                                                                                >  3:312980/1‑147 (MQ=255)
                                    ccGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGaa                                                                                                                >  2:190300/1‑147 (MQ=255)
                                    ccGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGaa                                                                                                                >  4:141059/1‑147 (MQ=255)
                                      gATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGc                                                                                                            <  7:86463/149‑1 (MQ=255)
                                      gATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGc                                                                                                            >  7:259401/1‑149 (MQ=255)
                                       atcatcGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCt                                                                                                           <  1:190300/149‑1 (MQ=255)
                                         catcGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAccagctcttcgctgcgtttgcgcacgctggcgtcttcgctgtact                                                                                                         >  6:192543‑M1/1‑104 (MQ=255)
                                           tcGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCaa                                                                                                                                                     <  2:310135/103‑1 (MQ=255)
                                           tcGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGATGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCaa                                                                                                                                                     >  1:310135/1‑103 (MQ=255)
                                             gTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGtgg                                                                                                      >  7:38394‑M2/1‑145 (MQ=255)
                                               ccACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCt                                                                                                           <  5:375025/141‑1 (MQ=255)
                                               ccACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCt                                                                                                           >  6:375025/1‑141 (MQ=255)
                                                cACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAccagctcttcgctgcgtttgcgcacgctggcgtcttcgctgtacttggcac                                                                                                   <  5:192543‑M1/148‑52 (MQ=255)
                                                    cGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCActgctg                                                                                              <  3:388566/149‑1 (MQ=255)
                                                              tCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTgg                                                                                    >  6:384834/1‑149 (MQ=255)
                                                              tCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTgg                                                                                    <  4:39165/149‑1 (MQ=255)
                                                              tCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTgg                                                                                    >  8:29142/1‑149 (MQ=255)
                                                                   tGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGTCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAccagctcttcgctgcgtttgcgcacgctggcgtcttcgctgtacttggca                                                                                                    >  1:297849‑M1/1‑79 (MQ=255)
                                                                   tGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAccagctcttcgctgcgtttgcgcacgctggcgtcttcgctgtacttggca                                                                                                    <  2:297849‑M1/128‑51 (MQ=255)
                                                                   tGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAg                                                                               <  4:131294/149‑1 (MQ=255)
                                                                      tGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGcc                                                                            >  8:104838/1‑149 (MQ=255)
                                                                      tGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGcc                                                                            >  6:285984/1‑149 (MQ=255)
                                                                      tGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGcc                                                                            >  2:319883/1‑149 (MQ=255)
                                                                        ttGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTAc                                                                                                                                                 <  8:233186/78‑1 (MQ=255)
                                                                        ttGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTAc                                                                                                                                                 >  7:233186/1‑78 (MQ=255)
                                                                        ttGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGcc                                                                            <  5:408594/147‑1 (MQ=255)
                                                                        ttGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCtt                                                                          <  1:263713/149‑1 (MQ=255)
                                                                          gACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTc                                                                         <  4:262977/148‑1 (MQ=255)
                                                                          gACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTc                                                                         <  2:122561/148‑1 (MQ=255)
                                                                          gACCATGAAGGCGCTGATCGAAGCTGGCCGCGGATTCTCCACTTTTGTGGCCATGCATCTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGTTGGCACTGCTGACGCCGGTGGCCAAGGCCTTcc                                                                        >  4:423785/1‑149 (MQ=255)
                                                                            ccATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTc                                                                      <  3:395745/149‑1 (MQ=255)
                                                                             cATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCa                                                                     >  8:262269/1‑149 (MQ=255)
                                                                             cATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCa                                                                     >  1:116867/1‑149 (MQ=255)
                                                                              aTGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCAc                                                                    >  1:31614/1‑149 (MQ=255)
                                                                              aTGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCAc                                                                    <  3:254691/149‑1 (MQ=255)
                                                                                      gcTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCAcc                                                                   >  4:35044/1‑142 (MQ=255)
                                                                                      gcTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCAcc                                                                   <  3:35044/142‑1 (MQ=255)
                                                                                      gcTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTgg                                                            <  2:31614/149‑1 (MQ=255)
                                                                                        tGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGc                                                          >  1:22965/1‑149 (MQ=255)
                                                                                          aTCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGc                                                          <  3:278849/147‑1 (MQ=255)
                                                                                              aaGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTg                                                       <  1:253309/146‑1 (MQ=255)
                                                                                              aaGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTg                                                       >  2:253309/1‑146 (MQ=255)
                                                                                                       gcgcATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTg                                           >  2:369547/1‑149 (MQ=255)
                                                                                                           cATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCAt                                        >  7:92107/1‑149 (MQ=255)
                                                                                                           cATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCAt                                        <  2:116867/149‑1 (MQ=255)
                                                                                                                tcCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGc                                     >  7:183540/1‑147 (MQ=255)
                                                                                                                tcCACTTATGCGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGc                                     >  6:16657/1‑147 (MQ=255)
                                                                                                                  cACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCcagc                                 <  3:141059/149‑1 (MQ=255)
                                                                                                                  cACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCcagc                                 <  1:369547/149‑1 (MQ=255)
                                                                                                                   aCTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCATCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCATTCCTCACAGACCTGGGCCTGGAGTGAGCAGTGCATGGCcag                                  >  4:305228/1‑147 (MQ=255)
                                                                                                                   aCTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCcag                                  >  5:317979/1‑147 (MQ=255)
                                                                                                                   aCTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCcag                                  >  4:145636/1‑147 (MQ=255)
                                                                                                                     ttATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAgg                              >  1:259780/1‑149 (MQ=255)
                                                                                                                     ttATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAgg                              >  8:261107/1‑149 (MQ=255)
                                                                                                                        tgtgGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAATGCGCAGTGCATGGCCAGCAGGTAt                           >  8:271347/1‑149 (MQ=255)
                                                                                                                          tgGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTc                         >  5:79004/1‑149 (MQ=255)
                                                                                                                             ccATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTcggc                      >  5:350986/1‑149 (MQ=255)
                                                                                                                             ccATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTcggc                      >  5:94778/1‑149 (MQ=255)
                                                                                                                                  cAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCa                 <  6:94778/149‑1 (MQ=255)
                                                                                                                                    aCTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATg               >  8:200104/1‑149 (MQ=255)
                                                                                                                                    aCTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATg               >  1:86061/1‑149 (MQ=255)
                                                                                                                                     cTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATgg              <  1:115891/149‑1 (MQ=255)
                                                                                                                                     cTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATgg              >  7:19284/1‑149 (MQ=255)
                                                                                                                                        gACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAg                                             <  3:404097/115‑1 (MQ=255)
                                                                                                                                        gACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAg                                             >  4:404097/1‑115 (MQ=255)
                                                                                                                                          cAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATGGTTACa         <  5:384834/149‑1 (MQ=255)
                                                                                                                                          cAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATGGTTACa         <  7:29142/149‑1 (MQ=255)
                                                                                                                                            gTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGtggcactgtccagttgcatggccacataagtggagaatgcgcggccaccttcgatcagcgccttcatggtcaacagcatgcgacgcacgtccgggtg        <  5:192543‑M2/148‑98 (MQ=255)
                                                                                                                                             tGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGtggcactgtccagttgcatggccacataagtggagaatgcgcggccaccttcgatcagcgccttcatggtcaacagca                           <  2:297849‑M2/128‑79 (MQ=255)
                                                                                                                                             tGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGtggcactgtccagttgcatggccacataagtggagaatgcgacggccaccttcgatcagcgccttcatggtcaacagca                          >  1:297849‑M2/1‑50 (MQ=255)
                                                                                                                                               ccaccagctcttcgctgcgtttgcgcacgctggcgtcttcgctgtacttggcactgtccagttgcatggccacataagtggagaatgcgcggccaccttcgatcagcgccttcatggtcaacagcatgcgacgcacgtccgggtggac     >  7:38394‑M1/1‑3 (MQ=255)
                                                                                                                                               ccAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATGGTTACATTCGt    <  3:245038/149‑1 (MQ=255)
                                                                                                                                               ccAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATGGTTACATTCGt    <  7:104838/149‑1 (MQ=255)
                                                                                                                                                 aaGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGATTGCGCAGTGCATGGCCAGCAGGTATTCTGCGGGCATGGTTACATTCGTGa  <  7:271347/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CCGGCCGGCCCACAAGCCAAGGACAAGGCTGCCGACCCGATCATCGTCCACCCGGACGTGCGTCGCATGCTGTTGACCATGAAGGCGCTGATCGAAGGTGGCCGCGCATTCTCCACTTATGTGGCCATGCAACTGGACAGTGCCAAGTACAGCGAAGACGCCAGCGTGCGCAAACGCAGCGAAGAGCTGGTGGCACTGCTGACGCCGGTGGCCAAGGCCTTCCTCACCGACCTGGGCCTGGAGTGCGCAGTGCATGGCCAGCAGGTATTCGGCGGGCATGGTTACATTCGTGA  >  NC_002947/449811‑450103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.