New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 75522962 (0.870)5 (0.080) 5/246 NT 7.9% intergenic (‑75/‑176) PP_0645/PP_0646 hypothetical protein/hypothetical protein
?NC_002947 = 755247 60 (0.910)intergenic (‑93/‑158) PP_0645/PP_0646 hypothetical protein/hypothetical protein

TTTGTTGTCCGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTC  >  NC_002947/755081‑755372
                                                                                                                                                     |                                                                                                                                                
tttGTTGTCCGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTT                                                                                                                                                  >  3:139196‑M1/1‑149 (MQ=255)
 ttgttgTCCGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTT                                                                                                                                                  <  3:47643‑M1/148‑1 (MQ=255)
   gttgtCCGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTa                                                                                                                                               >  8:231206/1‑149 (MQ=255)
    ttttCCGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCGCTGCCTCCGACACAAAAAAACGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTAt                                                                                                                                              <  3:426464/146‑1 (MQ=255)
                 aCGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGaa                                                                                                                                 <  7:196933/149‑1 (MQ=255)
                 aCGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGaa                                                                                                                                 <  7:321385/149‑1 (MQ=255)
                   ggTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGaa                                                                                                                                 >  6:310511/1‑147 (MQ=255)
                   ggTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGaa                                                                                                                                 <  5:310511/147‑1 (MQ=255)
                   ggTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAAc                                                                                                                                >  6:156823/1‑148 (MQ=255)
                         tgggctgggccatttcGGAGGTCAGGCCAGTGCGCCGGGCTTTGGGCATCGCTCGGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGCGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACaaaaa                                                                                                                           >  8:37404‑M2/8‑142 (MQ=255)
                            ggTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTgttcactcccgcaaataaaaaaagggg                                                                                                                       <  8:390062‑M1/148‑28 (MQ=255)
                            ggTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTgttcactcccgcaaataaaaaaagggg                                                                                                                       >  7:390062‑M1/1‑121 (MQ=255)
                              ttGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAg                                                                                                                   <  8:60726/149‑1 (MQ=255)
                                ggCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCCGGGTCTGTCCCCCTTTTTgttcactcccgcaaataaaaaaagggggac                                                                                                                    <  1:320045‑M1/148‑31 (MQ=255)
                                 gCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAGCAAAAAGGGGGAGGGc                                                                                                                >  6:426797/1‑149 (MQ=255)
                                 gCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAggg                                                                                                                 <  4:31341/148‑1 (MQ=255)
                                  ccATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCCCCGCAAGCACGTTAAGTTATTGCCATTCGGGGATGTCCCCCTTTTTTTATTTGCGGTGGGGAAAaaaagggggggggggt                                                                                                                <  2:384427‑M2/149‑17 (MQ=255)
                                  ccATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGct                                                                                                               >  1:190416/1‑149 (MQ=255)
                                   cATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGTACAAAAAGGGGGAGGGctc                                                                                                              <  7:231206/149‑1 (MQ=255)
                                     tttCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGTCACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGctc                                                                                                              >  4:191314/1‑147 (MQ=255)
                                          tAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTcc                                                                                                       <  6:191252/149‑1 (MQ=255)
                                          tAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTcc                                                                                                       <  2:302434/149‑1 (MQ=255)
                                          tAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTcc                                                                                                       <  2:190416/149‑1 (MQ=255)
                                           aGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTgttcactcccgcaaataaaaaaaggggg                                                                                                                      <  5:40556‑M1/134‑29 (MQ=255)
                                           aGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTgttcactcccgcaaataaaaaaaggggg                                                                                                                      >  6:40556‑M1/1‑106 (MQ=255)
                                             gTCATGCCAGTGCGCCGTGCTTTGCTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCaa                                                                                                    <  3:170769/149‑1 (MQ=255)
                                                 tGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCg                                                                                                >  7:366184/1‑149 (MQ=255)
                                                  gCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCGTTTTTTATTTGCGGGAGTGAGCTAAAAGGGGGAGGGCGCTGGTTCCCACACCGc                                                                                               >  8:383891/1‑149 (MQ=255)
                                                   ccAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGc                                                                                               >  6:323431/1‑148 (MQ=255)
                                                     aGTGCGCCGTGCTGTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAg                                                                                            <  6:345753/149‑1 (MQ=255)
                                                         cgcCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGTACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGttc                                                                                        >  1:16489/1‑148 (MQ=255)
                                                         cgcCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAGCAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTtg                                                                                        <  5:426797/149‑1 (MQ=255)
                                                          gcCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTtgt                                                                                       <  3:119949/149‑1 (MQ=255)
                                                            cGTTCTTTGGTCATCGCGCTGCCTCCGACACAAATAAAGGGCACCGGAAGCACGTTAAGTTAGTGGCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGc                                                                                     <  5:225031/149‑1 (MQ=255)
                                                             gTGCTTTGGTCATCGCTCTGCCTCCGTCACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCt                                                                                    <  3:191314/149‑1 (MQ=255)
                                                             gTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCt                                                                                    <  4:139196/149‑1 (MQ=255)
                                                                     gTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCt                                                                                    <  7:298823/141‑1 (MQ=255)
                                                                     gTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCt                                                                                    >  8:298823/1‑141 (MQ=255)
                                                                     gTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTACCAAACCGCTAGGTTGTGCTTAGTCCt                                                                             >  5:236127/1‑148 (MQ=255)
                                                                        aTCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAAt                                                                         <  5:323431/149‑1 (MQ=255)
                                                                             tctGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCcgcg                                                                    >  2:211056/1‑149 (MQ=255)
                                                                              ctGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGt                                                                   >  2:230589/1‑149 (MQ=255)
                                                                                 ccTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTg                                                                 <  6:236127/148‑1 (MQ=255)
                                                                                   tCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTc                                                              >  3:366734/1‑149 (MQ=255)
                                                                                     cGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTc                                                              <  5:156823/147‑1 (MQ=255)
                                                                                      gACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCg                                                             >  2:400316/1‑147 (MQ=255)
                                                                                         acaAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAgg                                                         >  8:170154/1‑148 (MQ=255)
                                                                                         acaAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAgg                                                         >  2:242162/1‑148 (MQ=255)
                                                                                           aaaaaaaGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGGTTAGTCCTAAATCCGCGTTGCTCGTAGGAAt                                                      >  3:367414/1‑149 (MQ=255)
                                                                                           aaaaaaaGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAAt                                                      >  7:60774/1‑149 (MQ=255)
                                                                                           aaaaaaaGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAAt                                                      <  1:211056/149‑1 (MQ=255)
                                                                                           aaaaaaaGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAAt                                                      >  2:403935/1‑149 (MQ=255)
                                                                                                    gCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGt                                              >  6:412490/1‑148 (MQ=255)
                                                                                                     cACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTa                                            <  8:366184/149‑1 (MQ=255)
                                                                                                       cccGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAgc                                          <  1:390508/149‑1 (MQ=255)
                                                                                                          gAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAgctgc                                       >  2:303920/1‑149 (MQ=255)
                                                                                                                  ttAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAgg                                 >  8:319077/1‑147 (MQ=255)
                                                                                                                       ttAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCAtt                          >  6:293784/1‑149 (MQ=255)
                                                                                                                         aGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCAttt                         <  1:242162/148‑1 (MQ=255)
                                                                                                                          gTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                       <  5:293784/149‑1 (MQ=255)
                                                                                                                          gTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                       <  3:139537/149‑1 (MQ=255)
                                                                                                                          gTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                       <  1:400316/149‑1 (MQ=255)
                                                                                                                          gTGCCATTCGGGTCTGTCCCCCGTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGc                       >  7:271324/1‑149 (MQ=255)
                                                                                                                           tGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAATAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGATGTGCTTAGTCAAAAATCCGCGTTGGTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCAtttcc                       >  1:314384/1‑147 (MQ=255)
                                                                                                                             ccATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGcccc                    >  4:421710/1‑149 (MQ=255)
                                                                                                                               aTTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACTAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCtt                  <  2:314384/149‑1 (MQ=255)
                                                                                                                                   cGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTcc                <  1:230589/148‑1 (MQ=255)
                                                                                                                                      gTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGc            <  1:384427/149‑1 (MQ=255)
                                                                                                                                      accccccccccctttttttccccaccgcaaataaaaaaagggggacatccccgaatggcaataacttaacgtgcttgcggggccctttttttgtgtcggaggcagagcgatgaccaaagcacggcgcactggcatgacctacgaaatgg             <  2:384427‑M1/143‑134 (MQ=255)
                                                                                                                                          gTCCCCCTTTTTTTATTTGCGGGAGTGAACaaaaagggggacagacccggaatggcactaacttaacgtgcttcgggtgccctttttttgtgtcggaggcagagcgatgaccaaagcacggcgcactggcatgacctacgaaatggcc          <  1:320045‑M2/148‑119 (MQ=255)
                                                                                                                                          gTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGtt        >  4:216618/1‑149 (MQ=255)
                                                                                                                                            cccccTTTTTTTATTTGCGGGAGTGAACaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttgtgtcggaggcagagcgatgaccaaagcacggcgcactggcatgacct                      >  6:40556‑M2/1‑28 (MQ=255)
                                                                                                                                            cccccTTTTTTTATTTGCGGGAGTGAACaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttgtgtcggaggcagagcgatgaccaaagcacggcgcactggcatgacct                      <  5:40556‑M2/134‑107 (MQ=255)
                                                                                                                                             ccccTTTTTTTATTTGCGGGAGTGAACaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttgtgtcggaggcagagcgatgaccaaagcacggcgcactggcatgacctacgaaatggccaacc       <  8:390062‑M2/148‑122 (MQ=255)
                                                                                                                                             ccccTTTTTTTATTTGCGGGAGTGAACaaaaagggggacagacccgaatggcactaacttaacgtgcttcgggtgccctttttttgtgtcggaggcagagcgatgaccaaagcacggcgcactggcatgacctacgaaatggccaacc       >  7:390062‑M2/1‑27 (MQ=255)
                                                                                                                                             ccccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAg      <  8:60774/148‑1 (MQ=255)
                                                                                                                                              gccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGt    >  6:333289/2‑149 (MQ=255)
                                                                                                                                              cccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGt    <  3:421710/149‑1 (MQ=255)
                                                                                                                                              cccTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGt    >  6:108681/1‑149 (MQ=255)
                                                                                                                                                ttttttttATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTc  >  6:372761/2‑149 (MQ=255)
                                                                                                                                                 tttttgttcactcccgcaaataaaaaaagggggacagacgcgaatggcactaacttaacgtgcttcgggtgccctttttttgtgtcggaggccgagcgatgcccaaagcccggcgcactggcctgacctccgaaatggcccagccca    >  8:37404‑M1/1‑5 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
TTTGTTGTCCGGTTGTGACGGTCTATGTGGTTGGCCATTTCGTAGGTCATGCCAGTGCGCCGTGCTTTGGTCATCGCTCTGCCTCCGACACAAAAAAAGGGCACCCGAAGCACGTTAAGTTAGTGCCATTCGGGTCTGTCCCCCTTTTTTTATTTGCGGGAGTGAACAAAAAGGGGGAGGGCTCTAGTTCCCAAACCGCTAGGTTGTGCTTAGTCCTAAATCCGCGTTGCTCGTAGGAATCGTCTCGTTAGCTGCTCGAGGCCTCATTTGCCCCTTCCTAGCTGTTAGGTTC  >  NC_002947/755081‑755372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.