New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1319708 =71 (0.990)4 (0.060) 4/262 NT 5.5% intergenic (+62/‑84) PP_1152/PP_1153 membrane fusion efflux protein/putative lipoprotein
?NC_002947 1319753 = 69 (0.990)intergenic (+107/‑39) PP_1152/PP_1153 membrane fusion efflux protein/putative lipoprotein

CGCCTGGATCAGGTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCGGCTT  >  NC_002947/1319560‑1319853
                                                                                                                                                    |                                                                                                                                                 
acgcgtcctcggagaaacgcacgatatgaacaccgcgcttgccgtgaaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctg                                                                                                                                                   <  6:265378‑M1/1‑1 (MQ=255)
 gCCTGGATCAGGTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAg                                                                                                                                                   <  6:141808/148‑1 (MQ=255)
  gcgtcctcggagaaacgcacgatatgaacaccgcgcttgccgtgaaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGc                                                                                                                                                 >  7:81928‑M1/147‑149 (MQ=255)
  ccaggATCAGGTGACGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGc                                                                                                                                                 >  4:33938/4‑149 (MQ=255)
       ctcggagaaacgcacgatatgaacaccgcgcttgccgtgaaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGc                                                                                                                                                 <  8:241015‑M1/3‑1 (MQ=255)
       ctcggagaaacgcacgatatgaacaccgcgcttgccgtgaaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGc                                                                                                                                                 >  7:241015‑M1/142‑144 (MQ=255)
          aGGTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCt                                                                                                                                          <  7:112226/148‑1 (MQ=255)
          aGGTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCt                                                                                                                                          <  6:140406/148‑1 (MQ=255)
           ggTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCtgt                                                                                                                                        <  3:189341/149‑1 (MQ=255)
            gTGCCGGAAGGGCTGACCTTGAGTTCGGGGATGACGGCGAGTGTGCTAGTGCACGAGGACCGCGATCCGCAGTGATGGTGCTGTCTTAACAGTCAGAAATGTAACGTTGGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCtgt                                                                                                                                        <  1:373452/148‑1 (MQ=255)
            gTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCtgt                                                                                                                                        >  1:328417/1‑148 (MQ=255)
               ccGGTAGGGCTGACCTTGAGTGCGGTGATGACGTCGAGTGTGCAAGTGAACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTTGCGAACGGTACGCCAGTTGCGTTAGGGTGTCGCTGTGAg                                                                                                                                     <  4:130904/148‑1 (MQ=255)
                cGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGtt                                                                                                                                   <  6:436890/149‑1 (MQ=255)
                    aGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGccc                                                                                                                               <  2:328417/149‑1 (MQ=255)
                      ggCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGa                                                                                                                             <  2:35388/149‑1 (MQ=255)
                       gCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGa                                                                                                                             >  5:34209/1‑148 (MQ=255)
                        cTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACa                                                                                                                           <  5:236514/149‑1 (MQ=255)
                         tGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGa                                                                                                                             >  6:8511/1‑146 (MQ=255)
                           aCCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACagag                                                                                                                        <  6:34209/149‑1 (MQ=255)
                           aCCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACagag                                                                                                                        >  1:300102/1‑149 (MQ=255)
                            ccTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAgg                                                                                                                       >  3:180904/1‑149 (MQ=255)
                             cTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAgg                                                                                                                       >  2:61195/1‑148 (MQ=255)
                             cTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAgg                                                                                                                       >  6:338312/1‑148 (MQ=255)
                             acaccgcgcttgccgtgaaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGCTGTCGCTGTGAGTTGCCCGACAGAgg                                                                                                                       <  1:33469‑M1/29‑1 (MQ=255)
                                gAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAAc                                                                                                                   >  2:205373/1‑149 (MQ=255)
                                  gTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAAccc                                                                                                                 <  3:217551/149‑1 (MQ=255)
                                  gTGCGGGGATGACGGCGAGTGTGCAAGAGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAAccc                                                                                                                 <  3:348811/149‑1 (MQ=255)
                                   tGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCaa                                                                                                                    <  8:132365/145‑1 (MQ=255)
                                   tGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCaa                                                                                                                    >  7:132365/1‑145 (MQ=255)
                                     cGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTtc                                                                                                              <  3:33938/149‑1 (MQ=255)
                                      ggggATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTtct                                                                                                             <  8:2920/149‑1 (MQ=255)
                                      ggggATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTtct                                                                                                             >  8:182402/1‑149 (MQ=255)
                                      ggggATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTtct                                                                                                             >  4:352207/1‑149 (MQ=255)
                                        ggATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTcc                                                                                                           >  4:12797/1‑149 (MQ=255)
                                         gATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTccc                                                                                                          <  5:8511/149‑1 (MQ=255)
                                           gtgaaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGc                                                                                                        <  3:176798‑M1/44‑1 (MQ=255)
                                              aaagccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAg                                                                                                     >  4:176798‑M1/103‑149 (MQ=255)
                                                gCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGgc                                                                                                   <  3:334526/149‑1 (MQ=255)
                                                agccgacaaagccctttagctgatcggcggcgttgcagatatcctgggaagtgatggccatgacgtaacctcgcaatgaaatcggaagatacgcacgcctGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGgc                                                                                                   >  2:33469‑M1/101‑149 (MQ=255)
                                                  gAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGgcgt                                                                                                 >  4:151084/1‑149 (MQ=255)
                                                        gCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTa                                                                                            >  5:263784/1‑148 (MQ=255)
                                                         cAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATc                                                                                          >  1:79295/1‑149 (MQ=255)
                                                          aaGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGAGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCt                                                                                         >  8:283426/1‑149 (MQ=255)
                                                               cACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGTGTTGCCCGATAGAGGCAACCCTTCTCGCTCCAGGCGTGTGTttcttcgg                                                                                     <  4:42142/148‑3 (MQ=255)
                                                               cACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGa                                                                                    <  2:79295/149‑1 (MQ=255)
                                                                aCGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGAt                                                                                   <  3:352207/149‑1 (MQ=255)
                                                                     gACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCACCCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCAt                                                                              >  3:70827/1‑149 (MQ=255)
                                                                        cgcgAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGc                                                                           >  6:57639/1‑149 (MQ=255)
                                                                           gAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAg                                                                        <  1:123609/149‑1 (MQ=255)
                                                                           gAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAg                                                                        <  2:300102/149‑1 (MQ=255)
                                                                                gCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTAc                                                                   >  8:262857/1‑149 (MQ=255)
                                                                                gCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTAc                                                                   >  7:251433/1‑149 (MQ=255)
                                                                                 cAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACg                                                                  <  7:403216/149‑1 (MQ=255)
                                                                                   gTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTc                                                                <  4:180904/149‑1 (MQ=255)
                                                                                   gTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTc                                                                <  3:73606/149‑1 (MQ=255)
                                                                                   gTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTc                                                                <  3:12797/149‑1 (MQ=255)
                                                                                           gCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCAt                                                        >  2:6577/1‑149 (MQ=255)
                                                                                           gCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCAt                                                        <  7:283426/149‑1 (MQ=255)
                                                                                            cTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCAt                                                        <  5:57639/148‑1 (MQ=255)
                                                                                               gCTTCACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTACGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCa                                                      <  4:301870/147‑1 (MQ=255)
                                                                                               gCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATc                                                       <  5:318015/146‑1 (MQ=255)
                                                                                               gCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATc                                                       >  6:318015/1‑146 (MQ=255)
                                                                                                cTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACtt                                                   >  7:112173/1‑149 (MQ=255)
                                                                                                   aaCAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTcc                                                 <  1:205373/148‑1 (MQ=255)
                                                                                                    aCAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTcc                                                 >  6:384157/1‑147 (MQ=255)
                                                                                                     cAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAg                                              >  8:268429/1‑149 (MQ=255)
                                                                                                     cAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAg                                              >  8:395478/1‑149 (MQ=255)
                                                                                                     cAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAg                                              <  1:61195/149‑1 (MQ=255)
                                                                                                        gCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGat                                           <  6:263784/149‑1 (MQ=255)
                                                                                                            aaaTGTAACGTTCGTGGCGAACGGTCCGGCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACCTCATGGCCATCACTTCCCAGGATATCt                                       >  1:247917/1‑149 (MQ=255)
                                                                                                            aaaTGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCt                                       <  7:395478/149‑1 (MQ=255)
                                                                                                                gTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCAtt                                                                             <  8:409153/107‑1 (MQ=255)
                                                                                                                gTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCAtt                                                                             >  7:409153/1‑107 (MQ=255)
                                                                                                                     gTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAAcgccg                              <  1:6577/149‑1 (MQ=255)
                                                                                                                      ttCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAAcgccgc                             <  8:112173/149‑1 (MQ=255)
                                                                                                                      ttCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAAcgccgc                             >  2:184813/1‑149 (MQ=255)
                                                                                                                         gTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGa                          >  8:292544/1‑149 (MQ=255)
                                                                                                                                  ggTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTaaa                 <  3:286867/149‑1 (MQ=255)
                                                                                                                                      cGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAggg              <  1:243270/148‑1 (MQ=255)
                                                                                                                                      cGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGc             >  3:79889/1‑149 (MQ=255)
                                                                                                                                       gCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCt            <  5:338312/149‑1 (MQ=255)
                                                                                                                                               cGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCgg     >  6:170236/1‑148 (MQ=255)
                                                                                                                                               cGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCgg     <  5:170236/148‑1 (MQ=255)
                                                                                                                                                gTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCGGCt   <  7:262857/149‑1 (MQ=255)
                                                                                                                                                gTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCGGCt   >  2:319360/1‑149 (MQ=255)
                                                                                                                                                 ttAGGCTGTCGCTGTGAGGTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCGGCtt  <  8:123180/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
CGCCTGGATCAGGTGCCGGAAGGGCTGACCTTGAGTGCGGGGATGACGGCGAGTGTGCAAGTGCACGAGGACCGCGAGCCGCAGTGATGGTGCTGGCTTAACAGGCAGAAATGTAACGTTCGTGGCGAACGGTCCGCCAGTTGCGTTAGGCTGTCGCTGTGAGTTGCCCGACAGAGGCAACCCTTCTCCCGCCAGGCGTGCGTATCTTCCGATTTCATTGCGAGGTTACGTCATGGCCATCACTTCCCAGGATATCTGCAACGCCGCCGATCAGCTAAAGGGCTTTGTCGGCTT  >  NC_002947/1319560‑1319853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.