New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 143305457 (0.800)4 (0.070) 4/228 NT 7.1% intergenic (+42/+82) xenA/PP_1255 protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
?NC_002947 = 1433106 57 (0.940)intergenic (+94/+30) xenA/PP_1255 protein XenA/cis‑4‑hydroxy‑D‑proline oxidase

TGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCAC  >  NC_002947/1432906‑1433201
                                                                                                                                                     |                                                                                                                                                   
tGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCC                                                                                                                                                     >  7:372325‑M1/1‑149 (MQ=255)
  gCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCC                                                                                                                                                     <  2:226540‑M1/147‑1 (MQ=255)
    cGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCactt                                                                                                                                                 >  2:84524‑M1/1‑145 (MQ=255)
       cccGCACGTGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCTTGCCCGcgaatg                                                                                                                                              <  6:416058/149‑6 (MQ=255)
        ccGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACAGTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCca                                                                                                                                              >  1:138913/1‑148 (MQ=255)
        ccGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCca                                                                                                                                              >  5:410627/1‑148 (MQ=255)
                 gCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCAGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACGcc                                                                                                                                    >  5:118504/1‑149 (MQ=255)
                  cTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCg                                                                                                                                   >  8:182671/1‑149 (MQ=255)
                     aCTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCcac                                                                                                                                             >  8:268208/1‑136 (MQ=255)
                     aCTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCcac                                                                                                                                             <  7:268208/136‑1 (MQ=255)
                          gctgcCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGttt                                                                                                                            <  8:136416/148‑1 (MQ=255)
                           ctgcCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCTCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCa                                                                                                                          <  4:136662/149‑1 (MQ=255)
                           ctgcCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACGCCGCAGGTTTCa                                                                                                                          <  8:372325/149‑1 (MQ=255)
                              ccAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGa                                                                                                                        >  2:97093/1‑148 (MQ=255)
                               cAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCAc                                                                                                                                                 <  5:262419/122‑1 (MQ=255)
                               cAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCAc                                                                                                                                                 >  6:262419/1‑122 (MQ=255)
                               cAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGAt                                                                                                                       >  6:137708/1‑148 (MQ=255)
                                aaGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATAc                                                                                                                     <  3:154120/149‑1 (MQ=255)
                                aaGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATAc                                                                                                                     <  1:132083/149‑1 (MQ=255)
                                    aGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCa                                                                                                                 >  6:405956/1‑149 (MQ=255)
                                    aGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCa                                                                                                                 <  2:211079/149‑1 (MQ=255)
                                       tGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCAcc                                                                                                               >  4:205164/1‑148 (MQ=255)
                                         ggggTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCct                                                                                                             <  2:416398/148‑1 (MQ=255)
                                             tGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctg                                                                                                        >  2:333961‑M1/1‑104 (MQ=255)
                                             tGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCtg                                                                                                        <  5:137708/149‑1 (MQ=255)
                                               gAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCtgt                                                                                                       <  7:182671/148‑1 (MQ=255)
                                                aaaaaGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCtgtg                                                                                                      >  7:80573/1‑148 (MQ=255)
                                                  aaaGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTgg                                                                                                     >  5:404586/1‑147 (MQ=255)
                                                   aaGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAg                                                                                                  >  1:115373/1‑149 (MQ=255)
                                                    aGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGt                                                                                                 <  8:252369/149‑1 (MQ=255)
                                                          ctGGACCTTGCAGGCGACTTTTGGACACTGGCTCGAGCGTAATCGGTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggct                                                                                            >  3:336064‑M2/1‑143 (MQ=255)
                                                             gACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgc                                                                                         <  1:333961‑M1/148‑61 (MQ=255)
                                                              aCCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgccc                                                                                       >  6:153577‑M2/1‑139 (MQ=255)
                                                                 ttGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgc                                                                                     <  6:260498‑M2/148‑13 (MQ=255)
                                                                   gCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcg                                                                                    <  1:84524‑M1/147‑66 (MQ=255)
                                                                    ccGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaa                                                                                  >  5:405956‑M2/1‑133 (MQ=255)
                                                                     cGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatg                                                                                <  3:381898‑M1/149‑70 (MQ=255)
                                                                     cGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatg                                                                                <  7:331645‑M2/149‑18 (MQ=255)
                                                                      ggCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatgg                                                                               >  4:192533‑M2/1‑131 (MQ=255)
                                                                       gcgcCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatggg                                                                              <  7:342249‑M2/149‑20 (MQ=255)
                                                                       gcgcCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatggg                                                                              >  3:205164‑M2/1‑130 (MQ=255)
                                                                          ccTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCg                                                                           >  1:372852/1‑149 (MQ=255)
                                                                           cTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCgg                                                                          <  5:260498/149‑1 (MQ=255)
                                                                                gCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGACCGCGAATGGGCCGGTAggg                                                                     >  3:221247/1‑149 (MQ=255)
                                                                                 cacaCTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAggg                                                                     <  4:182560/148‑1 (MQ=255)
                                                                                         cTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAAcc                                                            >  2:299641/1‑149 (MQ=255)
                                                                                            gAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGTCCGCGAATGGGCCGGTAGGGGCTAAAACCgg                                                          <  8:280072/148‑1 (MQ=255)
                                                                                            gAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCgg                                                          <  6:410627/148‑1 (MQ=255)
                                                                                            gAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCgg                                                          <  8:331645/148‑1 (MQ=255)
                                                                                            gAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTCCAGCCCATTCGAGGGCAAGCCCGCACACACAGAGAAACCGCAGGTTTCAGATACTGCACCCTCTCTGAGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGCCTAAAACCgg                                                          >  4:93714/1‑148 (MQ=255)
                                                                                            gAGCGTTATCGCTGAGGCTTGGAGCGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGTTACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCTCGAATGGGCCGGTAGGGGCTATAACCgg                                                          <  3:93714/148‑1 (MQ=255)
                                                                                               cGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCa                                                      <  1:299641/149‑1 (MQ=255)
                                                                                                 ttATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGt                                                    >  1:400428/1‑149 (MQ=255)
                                                                                                    tCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCg                                                  <  5:67456/148‑1 (MQ=255)
                                                                                                    tCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCg                                                  <  6:153611/148‑1 (MQ=255)
                                                                                                      gCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCTGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCgg                                                 >  1:78763/1‑148 (MQ=255)
                                                                                                      gCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTa                                               >  3:328876/1‑149 (MQ=255)
                                                                                                       cTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTAt                                              >  2:357495/1‑149 (MQ=255)
                                                                                                       cTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCAGCACCCACAGAGACACCGCAGGTTTCAGATACTGAACACTCTCTGTGGAAGTGGGCTTGCCCGCGAATCGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTAt                                              >  4:117956/1‑149 (MQ=255)
                                                                                                        tGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATg                                             >  5:426642/1‑149 (MQ=255)
                                                                                                            gCTTGGAGGGGCTGGTTTGCAGCCCATTCGCGGGCAAGCGGGCACCCAGAGAGACAGCGCAGGTTTCTGATACTGCAGCCTCTGTGTGGATGTGGGGTTGGCCGCGTATGGGCCGGTAGGGGGTTTAACCGGTTCAGTCGGTATgcggc                                         >  5:244548/1‑147 (MQ=255)
                                                                                                                  aGGGGCTGCTTTCCACCCCATTGGCGCGCAAGCCCGCACCCACAGACACACCGCAGGTTTCAGAAACTCCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCAtctc                                   <  6:244548/149‑1 (MQ=255)
                                                                                                                     ggCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAgg                                <  2:372852/149‑1 (MQ=255)
                                                                                                                      gctgctTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACCCCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGc                               >  3:57287/1‑149 (MQ=255)
                                                                                                                      gctgctTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGc                               >  4:124035/1‑149 (MQ=255)
                                                                                                                       ctgctTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCCCCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAGACCGGGTCAGTCGGTATGCGCCCATCTCAGGcc                              >  3:256778/1‑149 (MQ=255)
                                                                                                                           tttGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCTGTCGGTATGCGCCCAGCTCAGGcccccc                          >  5:59789/1‑149 (MQ=255)
                                                                                                                                aGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCt                     >  6:18916/1‑149 (MQ=255)
                                                                                                                                  cccATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgc                   >  3:205164‑M1/1‑19 (MQ=255)
                                                                                                                                  cccATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgc                   <  7:342249‑M1/149‑131 (MQ=255)
                                                                                                                                  cccATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGc                   >  7:86996/1‑149 (MQ=255)
                                                                                                                                   ccATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgcc                  >  4:192533‑M1/1‑18 (MQ=255)
                                                                                                                                    cATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccg                 <  7:331645‑M1/149‑133 (MQ=255)
                                                                                                                                    cATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccg                 <  3:381898‑M2/149‑81 (MQ=255)
                                                                                                                                     aTTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCt                  >  5:69272/1‑147 (MQ=255)
                                                                                                                                      ttCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccgg                >  5:405956‑M1/1‑15 (MQ=255)
                                                                                                                                        cgcgGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggc               <  1:84524‑M2/147‑83 (MQ=255)
                                                                                                                                         gcgGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaa             <  6:260498‑M1/148‑137 (MQ=255)
                                                                                                                                          cgGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCaa           <  8:80573/149‑1 (MQ=255)
                                                                                                                                            gggCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaaggt          >  6:153577‑M1/1‑10 (MQ=255)
                                                                                                                                              gCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaaggtc         <  1:333961‑M2/148‑89 (MQ=255)
                                                                                                                                              gCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCg        >  8:218388/1‑149 (MQ=255)
                                                                                                                                              gCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCg        <  6:118504/149‑1 (MQ=255)
                                                                                                                                               cAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGc       >  4:233893/1‑149 (MQ=255)
                                                                                                                                               cAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGc       <  2:78763/149‑1 (MQ=255)
                                                                                                                                                 aGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcaccgattacgctcgagccagtgtccaaaagtcgcctgcaaggtccag      >  3:336064‑M1/1‑5 (MQ=255)
                                                                                                                                                   cccGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCccca   >  8:112646/1‑149 (MQ=255)
                                                                                                                                                   cccGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCccca   <  2:69672/149‑1 (MQ=255)
                                                                                                                                                    ccGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCcccac  <  4:328876/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
TGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCAC  >  NC_002947/1432906‑1433201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.