New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 103600174 (1.030)5 (0.070) 5/254 NT 6.4% coding (180/399 nt) PP_0894 hypothetical protein
?NC_002947 = 1036045 76 (1.120)coding (136/399 nt) PP_0894 hypothetical protein

CTGTCGGCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAACATTTC  >  NC_002947/1035898‑1036190
                                                                                                                                                   |                                                                                                                                                 
cTGTCGGCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAc                                                                                                                                                  <  6:241458‑M2/149‑2 (MQ=255)
cTGTCGGCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAc                                                                                                                                                  >  5:241458‑M2/1‑148 (MQ=255)
  gTCGGCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcct                                                                                                                                                <  7:68048‑M2/149‑4 (MQ=255)
     ggCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctggc                                                                                                                                             <  7:37311‑M2/149‑7 (MQ=255)
     ggCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctggc                                                                                                                                             >  4:257265‑M2/1‑143 (MQ=255)
     ggCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctgg                                                                                                                                              >  3:45586‑M2/1‑143 (MQ=255)
        aaCCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCtt                                                                                                                                          >  4:110678/1‑149 (MQ=255)
          cccTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGc                                                                                                                                        <  4:355127/149‑1 (MQ=255)
             ttCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCa                                                                                                                                     >  3:243046/1‑149 (MQ=255)
                gTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATc                                                                                                                                   <  2:343555/148‑1 (MQ=255)
                 tCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTg                                                                                                                                 >  6:110319/1‑149 (MQ=255)
                   aTCGGCCAGGTATTGGCCATGCTCGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGgc                                                                                                                               <  7:290810/149‑1 (MQ=255)
                   aTCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTgg                                                                                                                                <  7:5758/148‑1 (MQ=255)
                   aTCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGgc                                                                                                                               <  8:37311/149‑1 (MQ=255)
                       gCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTc                                                                                                                           >  1:283595/1‑149 (MQ=255)
                          aGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGcc                                                                                                                        >  1:297480/1‑149 (MQ=255)
                                tGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGtt                                                                                                                  >  5:117777/1‑149 (MQ=255)
                                tGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGt                                                                                                                   <  8:191709/148‑1 (MQ=255)
                                 ggCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACATGGCCTTGCCCATCTGGCGCTCGCCCTGGTTg                                                                                                                 >  5:71446/1‑149 (MQ=255)
                                  gCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGa                                                                                                                >  7:263309/1‑149 (MQ=255)
                                   ccATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGAt                                                                                                               <  6:153102/149‑1 (MQ=255)
                                   ccATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGAt                                                                                                               <  1:250179/149‑1 (MQ=255)
                                     aTGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCAGGCGCTCGCCCTGGTTGATGt                                                                                                             >  4:318577/1‑149 (MQ=255)
                                       gCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCg                                                                                                           >  5:280749/1‑149 (MQ=255)
                                        cACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGt                                                                                                          <  5:406157/149‑1 (MQ=255)
                                         aCGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTg                                                                                                         <  8:68048/149‑1 (MQ=255)
                                         aCGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTg                                                                                                         <  6:117777/149‑1 (MQ=255)
                                            gTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTACTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGATTCAACATTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGa                                                                                                       >  6:380030/1‑148 (MQ=255)
                                             tGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGAt                                                                                                      >  2:841/1‑148 (MQ=255)
                                             tGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATc                                                                                                     <  3:100261/149‑1 (MQ=255)
                                             tGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATc                                                                                                     <  2:283595/149‑1 (MQ=255)
                                               aaCTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCAc                                                                                                   <  6:194984/149‑1 (MQ=255)
                                                    cgccgccgcGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCtt                                                                                              >  7:199335/1‑149 (MQ=255)
                                                     gccgccgcGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTc                                                                                             >  3:280815/1‑149 (MQ=255)
                                                        gccgcGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCt                                                                                          <  1:163153/149‑1 (MQ=255)
                                                         ccgcGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCt                                                                                          >  5:14831/1‑148 (MQ=255)
                                                                    ccATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCa                                                                               <  4:243046/148‑1 (MQ=255)
                                                                    ccATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAg                                                                              <  7:189077/149‑1 (MQ=255)
                                                                     cATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGccttc                                                                             <  6:14831/149‑4 (MQ=255)
                                                                      aTCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGCACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGa                                                                             >  2:398400/1‑148 (MQ=255)
                                                                      aTCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGa                                                                             >  8:328747/1‑148 (MQ=255)
                                                                             ttCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCgg                                                                     <  3:110678/149‑1 (MQ=255)
                                                                                  cATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGgcgc                                                                                                                             >  4:281617/1‑88 (MQ=255)
                                                                                  cATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGgcgc                                                                                                                             <  3:281617/88‑1 (MQ=255)
                                                                                  cATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCAt                                                                  <  1:143609/147‑1 (MQ=255)
                                                                                  cATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATg                                                                 >  2:214143/1‑148 (MQ=255)
                                                                                    tCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCa                                                              >  5:4980/1‑149 (MQ=255)
                                                                                      accacGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCAc                                                             <  5:110319/148‑1 (MQ=255)
                                                                                       ccacGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCAccc                                                           <  2:297480/149‑1 (MQ=255)
                                                                                        cacGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCcg                                                          >  3:128706/1‑149 (MQ=255)
                                                                                          cGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCcgcg                                                        >  7:411070/1‑149 (MQ=255)
                                                                                          cGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCcgcg                                                        >  6:32003/1‑149 (MQ=255)
                                                                                           gATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGt                                                       <  7:82555/149‑1 (MQ=255)
                                                                                           gATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGAAGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGt                                                       <  6:19308/149‑1 (MQ=255)
                                                                                                cGGCCTGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctggccgacatcgtggtgatgcagaacgctgatggcagccgcgcggcggcggagttcaccgtgcatggccaatacctggccgatgacgaag                                                       >  5:199640‑M2/1‑52 (MQ=255)
                                                                                                cGGCCTGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctggccgacatcgtggtgatgcagaacgctgatggcagccgcgcggcggcggagttcaccgtgcatggccaatacctggccgatgacgaag                                                       <  6:199640‑M2/144‑93 (MQ=255)
                                                                                                 ggCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctggccgacatcgtggtgatgcagaacgccgatggcagccgcgcggcggcggagttcaccgtgcatggccaatacctggccgatgacgaagggttgc                                                 <  6:102234‑M2/149‑99 (MQ=255)
                                                                                                 ggCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAg                                                  <  3:258737/148‑1 (MQ=255)
                                                                                                  gCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAAcctggccgacatcgtggtgatgcagaacgccgatggcagccgcgcggcggccgagttcaccgtgcatggccaatacctggccgaggaggaagggttgcc                                                <  4:90910‑M2/149‑100 (MQ=255)
                                                                                                   ccAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCAt                                                                  <  2:292391/130‑1 (MQ=255)
                                                                                                   ccAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCAt                                                                  >  1:292391/1‑130 (MQ=255)
                                                                                                    cAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAggcgg                                              <  4:146894/149‑1 (MQ=255)
                                                                                                     aGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGc                                                                    <  6:218864/126‑1 (MQ=255)
                                                                                                     aGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGc                                                                    >  5:218864/1‑126 (MQ=255)
                                                                                                      ggCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGgcggcg                                            <  6:4980/149‑1 (MQ=255)
                                                                                                         gcTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCgtag                                         >  3:148252/1‑149 (MQ=255)
                                                                                                             gcgGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCAt                                                                  >  4:276489/1‑120 (MQ=255)
                                                                                                             gcgGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCAt                                                                  <  3:276489/120‑1 (MQ=255)
                                                                                                             gcgGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAg                                     >  1:74433/1‑149 (MQ=255)
                                                                                                              cgGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGc                                    <  6:430832/149‑1 (MQ=255)
                                                                                                                   gcagcGGTTCATCTTTTCCATGAACGCGGCGAAcctggccgacatcgtggtgatgcagaacgccgatggcagccgcgcggcggcggagttcaccgtgcatggccaatacctggccgatgacgaagggttgccgacagcaaacggccag                                >  5:102234‑M2/1‑33 (MQ=255)
                                                                                                                   gcagcGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTa                               <  8:263309/149‑1 (MQ=255)
                                                                                                                      gcGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCa                            <  4:128706/149‑1 (MQ=255)
                                                                                                                          ttCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTc                        <  4:148252/149‑1 (MQ=255)
                                                                                                                             aTCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGt                     >  5:101760/1‑149 (MQ=255)
                                                                                                                              tCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAggcggc                                             <  8:18200/124‑1 (MQ=255)
                                                                                                                              tCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAggcggc                                             >  7:18200/1‑124 (MQ=255)
                                                                                                                               cTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTg                   >  4:353349/1‑149 (MQ=255)
                                                                                                                                ttttCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGc                  >  4:253939/1‑149 (MQ=255)
                                                                                                                                  ttCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGtt                    <  7:328747/145‑1 (MQ=255)
                                                                                                                                  ttCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCg                 <  4:280815/148‑1 (MQ=255)
                                                                                                                                  ttCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCg                 <  5:32003/148‑1 (MQ=255)
                                                                                                                                      aTGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCAt            >  6:265610/1‑149 (MQ=255)
                                                                                                                                      aTGAACGCGGCGAACCTGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATg           <  5:143249/149‑1 (MQ=255)
                                                                                                                                       tGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATg           <  1:214143/149‑1 (MQ=255)
                                                                                                                                       tGAACGCGGCGAACCTGGACTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCTGTCATg           >  6:440735/1‑149 (MQ=255)
                                                                                                                                           cgcgGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAAc       <  5:62346/149‑1 (MQ=255)
                                                                                                                                              ggcgAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAACAtt    >  2:369300/1‑149 (MQ=255)
                                                                                                                                              ggcgAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCACCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAACAtt    >  2:79785/1‑149 (MQ=255)
                                                                                                                                                cgAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAACATTTc  <  6:101760/149‑1 (MQ=255)
                                                                                                                                                cgAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGAGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCTGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAACATTTc  <  6:25211/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CTGTCGGCAACCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCGCCGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTTTCCATGAACGCGGCGAACCTGGCCTTGCCCATCTGGCGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAACGCCGGCATGTCACCCGCGTTGAAGGCGGCGTAGTAAGCATTTACCAGTTCGGTTGCGGTCATGGAACATTTC  >  NC_002947/1035898‑1036190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.