| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1419549 = | 29 (0.400) | 5 (0.090) | 3/210 | NT | 26.5% | intergenic (‑38/+98) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1419637 = | 5 (0.090) | intergenic (‑126/+10) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein | |||||
GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTT > NC_002947/1419557‑1419784 | GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACg < 4:299914‑M1/149‑1 (MQ=255) GCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGcc < 8:303241‑M1/149‑1 (MQ=255) cccgctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTc > 7:17271‑M2/74‑149 (MQ=255) CCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGTCCTGACCTGCTACTGCAATGTTTGAGGCTCTGTGGTTAAATGCTACCGCATCTTCAACTGCATCAACGCCGA‑‑‑‑CTc < 2:327695‑M1/148‑1 (MQ=255) CCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTc < 7:119066‑M1/148‑1 (MQ=255) CGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCA‑GGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGAc < 4:42174‑M1/149‑1 (MQ=255) gctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGTATCAACGCCGA‑‑‑‑CTCGAc > 3:375650‑M2/71‑149 (MQ=255) gctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGAc > 7:67570‑M2/71‑149 (MQ=255) gctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGAAACTGCATCAACGCCGC‑‑‑‑CTCGAc > 6:324271‑M2/71‑149 (MQ=255) ccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAATGTGTGAGGCTCTGTGGGTAAATGCGAACGAATCTGCAAATGCTTCAACGCCGA‑‑‑‑CTAGACCAGc > 8:201226‑M2/67‑149 (MQ=255) CCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGc < 6:351148‑M1/149‑1 (MQ=255) GTACTGTGCAGTGCGTGACGGCTGTGGAGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTg < 1:12545‑M1/148‑1 (MQ=255) cGTGACGGCTGTGGTGCCCCTGTGGGAGCGGGCGTGCCAGCGAAGAGGCCTGACCTGCTAATCCAAGGTGTGCGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCCGCCCCTGTACCGCTTCCAttt > 7:12668/1‑149 (MQ=255) gTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCAttt > 8:91783/1‑148 (MQ=255) gACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCAt > 8:366619/1‑149 (MQ=255) aCGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCAt < 3:299914/148‑1 (MQ=255) gCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTAc < 4:347505/131‑1 (MQ=255) cccTGTGGGAGCGGTCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCTACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGc < 8:12668/149‑1 (MQ=255) cctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGc > 3:45722‑M2/30‑148 (MQ=255) ctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCAt < 7:91783‑M2/121‑1 (MQ=255) tgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCAc < 3:58771‑M2/124‑1 (MQ=255) ggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGa > 6:154562‑M2/24‑149 (MQ=255) tagcgggcttgcaagagaagagTCCTGACCTGATAATTCAAGGTGGGAGGCTCTGTGGGTAAATGCGACCGAATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGAt < 1:327695‑M2/127‑1 (MQ=255) gagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGAt > 4:388788‑M2/23‑149 (MQ=255) gagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGGGAGGCTCTGGGGGTACATGCGCCCGCATCTGCAACTGCAGCAACGCCGA‑‑‑‑CGCGACCAGCCCCTGTACCGCTTCCAGTGCCTGGATCACGGCCTGCATCacgct > 5:220355‑M2/23‑147 (MQ=255) gagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGC‑AGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATc < 3:42174‑M2/127‑1 (MQ=255) aGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCTGTAACGCCGAAATGCTCGAGCAGCACATGTACATCTTCGAATTCATGGATCACGGCCTGCaac > 1:359253/1‑145 (MQ=255) gcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGa > 1:226393‑M2/13‑142 (MQ=255) gcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGa < 2:226393‑M2/130‑1 (MQ=255) gcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTgg > 7:316469‑M2/13‑149 (MQ=255) aagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTgg < 8:119066‑M2/144‑1 (MQ=255) gGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGttt < 8:316469‑M2/148‑1 (MQ=255) gGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGttt < 8:67570‑M2/148‑1 (MQ=255) gCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGttt > 6:307944/1‑148 (MQ=255) | GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGA‑‑‑‑CTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTT > NC_002947/1419557‑1419784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |