New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2891691 =	54 (0.750)	3 (0.040)	3/258	NT	6.0%	coding (150/372 nt)	PP_2546	membrane protein
	?	NC_002947	2891731 =	42 (0.610)					coding (110/372 nt)	PP_2546	membrane protein

TCAGTTGCCAGACGTAGTGCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCGGGGATTGGGGTTATCCCAG  >  NC_002947/2891585‑2891873                                                                                                                                                    |                                                                                                                                               tCAGTTGCCAGACGTAGTGCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGATCGGGCAGCCCAGGTGCAGGCACTCCACCGCCAAGGCCCCAGGCCAGGACCGGCAAGTgca                                                                                                                                                <  1:247960/148‑1 (MQ=255)   taccgccttgccgccgacaccctggtgctgctgcacctggccttcatcctgctggtgctgttcggcgggctgctggtgttgcgctggcgccctgccctgttgctGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTgcagc                                                                                                                                              >  6:261322‑M1/105‑147 (MQ=255)    gTTGCCAGACGTAGTGCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCaa                                                                                                                                            >  6:383589/1‑148 (MQ=255)          aGACGTAGTGCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAAcaggg                                                                                                                                       >  3:26870/1‑147 (MQ=255)                 gTGCTCGACGAAGCTGCCCTAGTAACCTGCGGCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGcc                                                                                                                              <  6:275057/149‑1 (MQ=255)                  tGCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCa                                                                                                                             <  5:73673/149‑1 (MQ=255)                   gCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAg                                                                                                                            >  4:20788/1‑149 (MQ=255)                    cTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAgc                                                                                                                           >  4:39364/1‑149 (MQ=255)                    cTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAgc                                                                                                                           >  6:129088/1‑149 (MQ=255)                       gacgaAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAgcg                                                                                                                          <  3:168475/147‑1 (MQ=255)                       gacgaAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCgca                                                                                                                        <  3:26462/149‑1 (MQ=255)                           aaGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCAc                                                                                                                    <  3:166871/149‑1 (MQ=255)                                     ggTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCccg                                                                                                          >  7:164375/1‑149 (MQ=255)                                          ccTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCccgcc                                                                                                        >  3:300697/1‑146 (MQ=255)                                          ccTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCccgcc                                                                                                        <  4:300697/146‑1 (MQ=255)                                           cTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGaa                                                                                                     >  5:180245/1‑148 (MQ=255)                                              cGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAg                                                                                                  <  3:20788/148‑1 (MQ=255)                                                tCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAAcag                                                                                                                                         >  3:339803/1‑107 (MQ=255)                                                tCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAAcag                                                                                                                                         <  4:339803/107‑1 (MQ=255)                                                 cACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGACCAGCag                                                                                               >  7:188424/1‑147 (MQ=255)                                                  aCCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCAc                                                                                               >  3:164586/1‑147 (MQ=255)                                                    cggcggCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACcagc                                                                                           <  6:319461/149‑1 (MQ=255)                                                     ggcggcATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACcag                                                                                            >  4:119896/1‑147 (MQ=255)                                                          cATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATg                                                                                     <  3:119896/149‑1 (MQ=255)                                                            ttGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATg                                                                                     >  8:251870/1‑147 (MQ=255)                                                            ttGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGaa                                                                                   <  4:164586/149‑1 (MQ=255)                                                                  aTGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGTCCAg                                                                             <  5:383589/149‑1 (MQ=255)                                                                  aTGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAg                                                                             >  4:69213/1‑149 (MQ=255)                                                                      ggTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTg                                                                          >  7:212321/1‑148 (MQ=255)                                                                          ttCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTgcagc                                                                      <  5:129088/148‑1 (MQ=255)                                                                            cccAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTgcagcag                                                                    >  3:387831/1‑148 (MQ=255)                                                                                  tggtgAGCGGGCAGCCCAGTAGCAGGCACTCCACCGAC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCAACAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAgg                                                             <  5:130388/149‑1 (MQ=255)                                                                                  tggtgAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAgg                                                             <  3:69213/149‑1 (MQ=255)                                                                                    gtgAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGgt                                                           <  8:153698/149‑1 (MQ=255)                                                                                     tgAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGgtg                                                          >  2:51751/1‑149 (MQ=255)                                                                                        gCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTcg                                                       >  7:251223/1‑149 (MQ=255)                                                                                         cGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGgt                                                           <  5:21967/144‑1 (MQ=255)                                                                                         cGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGgt                                                           >  6:21967/1‑144 (MQ=255)                                                                                           ggCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTcggcg                                                    >  1:113514/1‑149 (MQ=255)                                                                                            gCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTcggcgg                                                   <  2:113514/149‑1 (MQ=255)                                                                                                    ggTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCgg                                           <  7:249410/149‑1 (MQ=255)                                                                                                      tGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTa                                         <  8:212321/149‑1 (MQ=255)                                                                                                         gctgcacttgccggtcctggcctggggcctggcggtggagtgcAGCAACAGGGCAGGGCGCCAGCGCAACACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTa                                         >  6:261322‑M2/44‑147 (MQ=255)                                                                                                         aGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTagag                                      <  8:251223/149‑1 (MQ=255)                                                                                                            gcacttgccggtcctggcctggggcctggcggtggagtgcAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCa                                    >  2:306694‑M2/41‑149 (MQ=255)                                                                                                             cacttgccggtcctggcctggggcctggcggtggagtgcAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGGCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCAt                                   <  1:306694‑M2/110‑1 (MQ=255)                                                                                                               TCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTa                                         >  3:253873‑M1/1‑140 (MQ=255)                                                                                                               TCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTa                                         <  4:253873‑M1/140‑1 (MQ=255)                                                                                                               TCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATggg                                <  7:374546‑M1/149‑1 (MQ=255)                                                                                                               TCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATggg                                <  4:256267‑M1/149‑1 (MQ=255)                                                                                                                              ccaggccaggACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCgggg                  <  4:26870/149‑1 (MQ=255)                                                                                                                                    caggACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCGGGGATTggg            <  6:180245/149‑1 (MQ=255)                                                                                                                                            gCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCGGGGATTGGGGTTATccc    <  7:251870/149‑1 (MQ=255)                                                                                                                                            gCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCGGGGATTGGGGTTATcc     >  8:189260/1‑148 (MQ=255)                                                                                                                                              aaGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCGGGGATTGGGGTTATCCCAg  >  3:749/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                               TCAGTTGCCAGACGTAGTGCTCGACGAAGCTGCCCTGGTAACCTGCGTCACCGGCGGCATTGCGCATGCGGTTTTCCCAGGTGGTGAGCGGGCAGCCCAGGTGCAGGCACTCCACCGCC‑AGGCCCCAGGCCAGGACCGGCAAGTGCAGCAACAGGGCAGGGCGCCAGCGCAGCACCAGCAGCCCGCCGAACAGCACCAGCAGGATGAAGGCCAGGTGCAGCAGCACCAGGGTGTCGGCGGCAAGGCGGTAGAGCATGGGTTGGGTGCCCGGGGATTGGGGTTATCCCAG  >  NC_002947/2891585‑2891873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.