New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5773382 =	67 (0.940)	4 (0.060)	4/258	NT	6.0%	intergenic (‑420/‑56)	betT‑I/betI	choline transporter/choline‑responsive transcriptional repressor BetI
	?	NC_002947	5773423 =	61 (0.880)					intergenic (‑461/‑15)	betT‑I/betI	choline transporter/choline‑responsive transcriptional repressor BetI

GTGTCAATCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGCCGGTGTGTCGAACGG  >  NC_002947/5773277‑5773568                                                                                                                                                   |                                                                                                                                                  gtgtCAATCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTga                                                                                                                                                 <  8:75381/149‑1 (MQ=255)  gcgtcccccagtccgacctgatcgaccgcctgcaatgtggcttcgatcaactgctggcgccggatgggttgcataccgaccttgggcatcttgctatctcctcaGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTga                                                                                                                                                 >  6:372206‑M1/105‑148 (MQ=255)    tCAATCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTgagg                                                                                                                                               <  8:199862/148‑1 (MQ=255)    tCAATCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTgag                                                                                                                                                >  6:406802/1‑147 (MQ=255)    gtcccccagtccgacctgatcgaccgcctgcaatgtggcttcgatcaactgctggcgccggatgggttgcataccgaccttgggcatcttgctatctcctcaGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTgagga                                                                                                                                              >  5:293588‑M1/103‑149 (MQ=255)     cAATCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTgag                                                                                                                                                >  1:425099/1‑146 (MQ=255)       aTCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGgaga                                                                                                                                            >  7:283987/1‑148 (MQ=255)          cGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGTCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAg                                                                                                                                         <  6:429025/148‑1 (MQ=255)          cGTGCCTTCTCGACCGCATGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGACGCCTGTCGTCTGCTCGCATGCCTGAGGAGATAGc                                                                                                                                        <  4:300983/149‑1 (MQ=255)           gTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGc                                                                                                                                        >  6:394334/1‑148 (MQ=255)            tGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTTTTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCaa                                                                                                                                      <  3:117160/149‑1 (MQ=255)                ttCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATg                                                                                                                                  >  4:67619/1‑149 (MQ=255)                 tctcGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGc                                                                                                                                 >  6:152445/1‑149 (MQ=255)                     gACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGccc                                                                                                                               <  1:69201/147‑1 (MQ=255)                           cTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCgg                                                                                                                       <  8:283987/149‑1 (MQ=255)                               aaaaCTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTAt                                                                                                                    <  3:325612/148‑1 (MQ=255)                                    tGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAAcc                                                                                                              <  3:67619/149‑1 (MQ=255)                                              acaAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGgcgc                                                                                                    >  2:407251/1‑149 (MQ=255)                                              acaAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGgcgc                                                                                                    >  3:77573/1‑149 (MQ=255)                                                aaaTTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCCGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGgcgc                                                                                                    >  3:322809/1‑147 (MQ=255)                                                  aTTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGAt                                                                                                                                           <  3:263818/106‑1 (MQ=255)                                                  aTTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGAt                                                                                                                                           >  4:263818/1‑106 (MQ=255)                                                        gCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTg                                                                                           <  5:406802/148‑1 (MQ=255)                                                             gCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTTTCGTCTGCTCGCAGTCCTGAGGAGATATCAAGATGCCCAAGGTCGTTATGCAACCCATCCGGCGCCAGCAGTTGATCGaa                                                                                     <  8:299482/149‑1 (MQ=255)                                                              cTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAg                                                                                    <  5:364640/149‑1 (MQ=255)                                                              cTTATTCTTTATTGATTGAACGTGCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGaa                                                                                     <  8:305266/148‑1 (MQ=255)                                                               ttATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGc                                                                                   >  1:199692/1‑149 (MQ=255)                                                                 aTTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCca                                                                                 >  5:227119/1‑149 (MQ=255)                                                                  ttCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCca                                                                                 <  1:213989/148‑1 (MQ=255)                                                                     tttATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACAtt                                                                             >  1:214708/1‑149 (MQ=255)                                                                     tttATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACAtt                                                                             >  1:330291/1‑149 (MQ=255)                                                                      ttATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTg                                                                            >  7:350305/1‑149 (MQ=255)                                                                      ttATTGATTGAACGATCAATCAAAACAAAATAGACTGGCCTTCGCAGAGTAAGCCGCATGTCGAATGCTAACAGCCCTGAGGACAAATCAAGATGCCCAAGGTCGGAATGCAAACCATCCGGCACCAGCAGTTGATCCAAGCaacaatt                                                                            >  5:342354/1‑146 (MQ=255)                                                                       tATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCGGGCCTGAGGAGATAGCAAGATGCACAAGCTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTg                                                                            >  5:158730/1‑148 (MQ=255)                                                                        attgattgAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGc                                                                           <  2:199692/148‑1 (MQ=255)                                                                             ttgaACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGCTGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCgg                                                                     >  8:202716/1‑149 (MQ=255)                                                                             ttgaACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCgg                                                                     >  6:371742/1‑149 (MQ=255)                                                                               gaACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGt                                                                    <  6:227119/148‑1 (MQ=255)                                                                                aaCGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTc                                                                   <  6:362916/148‑1 (MQ=255)                                                                                 aCGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGa                                                                 <  8:360044/149‑1 (MQ=255)                                                                                  cGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGAt                                                                >  7:334909/1‑149 (MQ=255)                                                                                  cGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGAt                                                                <  2:214708/149‑1 (MQ=255)                                                                                   gTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATc                                                               <  2:330291/149‑1 (MQ=255)                                                                                       aatcaaAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGt                                                           <  8:350305/149‑1 (MQ=255)                                                                                        atcaaAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTc                                                          >  3:383910/1‑149 (MQ=255)                                                                                         tcaaAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCg                                                         <  1:407251/149‑1 (MQ=255)                                                                                         tcaaAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCg                                                         >  1:50326/1‑149 (MQ=255)                                                                                            aaacaaaaTAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCcagc                                                                                                <  1:381885/107‑1 (MQ=255)                                                                                            aaacaaaaTAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCcagc                                                                                                >  2:381885/1‑107 (MQ=255)                                                                                             aacaaaaTAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAg                                                                         >  5:149416/1‑129 (MQ=255)                                                                                             aacaaaaTAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAg                                                                         <  6:149416/129‑1 (MQ=255)                                                                                              acaaaaTAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCGGGCGGTCGATCAGGTCGGACTg                                                    <  5:152445/149‑1 (MQ=255)                                                                                                    tcctcaggcctgcgagcagacgacaggcggctgactcggcgaaggccTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGAc                                              >  5:293588‑M2/48‑149 (MQ=255)                                                                                                    tAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGAc                                              <  4:383910/149‑1 (MQ=255)                                                                                                      gACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGc                                            <  4:298518/149‑1 (MQ=255)                                                                                                       tcaggcctgcgagcagacgacaggcggctgactcggcgaaggccTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGc                                            >  6:372206‑M2/45‑148 (MQ=255)                                                                                                         tGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAg                                         >  2:193293/1‑149 (MQ=255)                                                                                                           GCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCa                                       <  3:221267‑M1/149‑1 (MQ=255)                                                                                                               cctgcgagcagacgacaggcggctgactcgcaggccTGAGGAGATAGCAAGATGCCCAAGCTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTgc                                   >  1:43568‑M2/37‑149 (MQ=255)                                                                                                                cgagcagacgacaggcggctgactcggcgaaggccTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTg                                    <  6:293588‑M2/112‑1 (MQ=255)                                                                                                                  ccGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCt                                >  3:161557/1‑149 (MQ=255)                                                                                                                  ccGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTACGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCt                                <  5:394334/149‑1 (MQ=255)                                                                                                                   cGAGTCAGCCGCCCGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGATGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTg                               <  4:322809/149‑1 (MQ=255)                                                                                                                          gccgccTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGccc                        >  6:155040/1‑149 (MQ=255)                                                                                                                          gccgccTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGGCGGTATGCAACCCATCCGGCGCCAGCAGTTGATc                                                                                        <  1:379565/85‑1 (MQ=255)                                                                                                                          gccgccTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGACGGTATGCAACCCATCCGGCGCCAGCAGTTGATc                                                                                        >  2:379565/1‑85 (MQ=255)                                                                                                                              ccTGGCGTCTGCTCTCAGTCCTGTTGAGATAGCATCATGCCCAAGGTCGGTATGCAACCGATCCGGCGCCAGCAGTTGATCGAAGCCAGATTGCAGGCGGTCGATCAGGTCGTACTGGGGTACGCCAGCTTTGCGCTGATTGCCCtttt                    <  6:342354/149‑1 (MQ=255)                                                                                                                              ccTGGCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGttt                    <  3:357897/149‑1 (MQ=255)                                                                                                                                tGTCGTCTGCTCCCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTgg                  >  2:137077/1‑149 (MQ=255)                                                                                                                                  tcgtcTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGc                 <  8:334909/148‑1 (MQ=255)                                                                                                                                    gtcTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGCCgg              <  3:375153/149‑1 (MQ=255)                                                                                                                                     tcTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGCCGgt             <  5:155040/149‑1 (MQ=255)                                                                                                                                         cTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGCCGgtgt           <  2:425099/147‑1 (MQ=255)                                                                                                                                                gccTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGCCGGTGTGTCGAACgg  <  7:121154‑M2/146‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                  GTGTCAATCCGTGCCTTCTCGACCGCCTGAAAAACTGTCAATGGCACAAATTGTCGCAGAGCTTATTCTTTATTGATTGAACGTTCAATCAAAACAAAATAGACTGGCCTTCGCCGAGTCAGCCGCCTGTCGTCTGCTCGCAGGCCTGAGGAGATAGCAAGATGCCCAAGGTCGGTATGCAACCCATCCGGCGCCAGCAGTTGATCGAAGCCACATTGCAGGCGGTCGATCAGGTCGGACTGGGGGACGCCAGCATTGCGCTGATTGCCCGTTTGGCCGGTGTGTCGAACGG  >  NC_002947/5773277‑5773568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.