Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,711,821 T→A 6.2% L18H (CTC→CAC) ‡ PP_4171 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,711,8210TA 6.2% 239.4 / 5.1 81L18H (CTC→CAC) ‡PP_4171hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (44/32);  new base A (3/2);  total (47/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01

TACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCGCGCCAGCGGTGCC  >  NC_002947/4711679‑4711969
                                                                                                                                              |                                                                                                                                                     
tACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTcggc                                                                                                                                                   >  6:202520/1‑147 (MQ=255)
tACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTcggc                                                                                                                                                   <  5:202520/147‑1 (MQ=255)
   ttttCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCa                                                                                                                                              <  8:22998/149‑1 (MQ=255)
         aGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCGAGCAGGGCGGTc                                                                                                                                               >  6:292882/1‑142 (MQ=255)
         aGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCGAGCAGGGCGGTc                                                                                                                                               <  5:292882/142‑1 (MQ=255)
          gACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTg                                                                                                                                       >  1:346933/1‑149 (MQ=255)
                   ccGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCgacg‑ac                                                                                                                             >  4:196792/1‑149 (MQ=255)
                      acacCCACTAGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTg                                                                                                                          >  6:298386/1‑149 (MQ=255)
                        acCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGTCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTcggcgg                                                                                                                                                 <  5:139708/125‑1 (MQ=255)
                        acCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGTCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTcggcgg                                                                                                                                                 >  6:139708/1‑125 (MQ=255)
                        acCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGt                                                                                                                         >  4:369245/1‑148 (MQ=255)
                          ccACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCa                                                                                                                      <  6:59192/149‑1 (MQ=255)
                           cACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAg                                                                                                                                             >  2:298371/1‑126 (MQ=255)
                           cACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCAt                                                                                                                     <  2:207954/149‑1 (MQ=255)
                              tGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCGAGCAGGGCGGTCa                                                                                                                                              <  3:247331/122‑1 (MQ=255)
                              tGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCGAGCAGGGCGGTCa                                                                                                                                              >  4:247331/1‑122 (MQ=255)
                                  aaaaCCCCCACGGTGAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGacaac                                                                                                              <  2:7969/149‑1 (MQ=255)
                                  aaaaCCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGacaa                                                                                                               >  5:203107/1‑148 (MQ=255)
                                  aaaaCCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGacaa                                                                                                               >  4:58028/1‑148 (MQ=255)
                                  aaaaCCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGacaa                                                                                                               >  8:99689/1‑148 (MQ=255)
                                     acacccACGGTCATTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCTGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACAcc                                                                                                           <  6:241190/146‑1 (MQ=255)
                                      cccccACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACAcc                                                                                                           >  1:123133/1‑148 (MQ=255)
                                        cccACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGAc                                                                                                        <  5:196908/149‑1 (MQ=255)
                                              gTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCca                                                                                                  <  3:195609/149‑1 (MQ=255)
                                                   ttACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGt                                                                                             >  5:166227/1‑149 (MQ=255)
                                                     aCCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGtt                                                                                            <  3:196792/148‑1 (MQ=255)
                                                      ccATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTc                                                                                           <  2:289500/148‑1 (MQ=255)
                                                        aTGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGa                                                                                        <  6:393854/149‑1 (MQ=255)
                                                        aTGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGa                                                                                        >  8:69802/1‑149 (MQ=255)
                                                        aTGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCGGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGa                                                                                        >  2:254599/1‑149 (MQ=255)
                                                           ccTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCg                                                                                     <  5:298386/149‑1 (MQ=255)
                                                             tGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGc                                                                                    >  6:436523/1‑148 (MQ=255)
                                                                ttCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑CCCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCcaca                                                                                >  2:278563/1‑149 (MQ=255)
                                                                ttCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCcaca                                                                                >  1:427570/1‑149 (MQ=255)
                                                                  cAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGc                                                                                    <  8:361292/143‑1 (MQ=255)
                                                                  cAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGc                                                                                    >  7:361292/1‑143 (MQ=255)
                                                                  cAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCAACGACAACACCGACCTGCCACAGGTTCTGACCGCCACACg                                                                              >  1:200013/1‑149 (MQ=255)
                                                                   aaTCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCacaccc                                                                             <  7:99689/149‑3 (MQ=255)
                                                                     tCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGGGGTCAGGCCGTGGCCGACGAAGAAGTTAATCCACAACACCGACAGGCCACAGGTTATGCCCCCCCCACGcc                                                                            >  1:142466/1‑149 (MQ=255)
                                                                     tCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCt                                                                           >  4:214831/1‑149 (MQ=255)
                                                                     tCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCt                                                                           >  8:75864/1‑149 (MQ=255)
                                                                       cTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTg                                                                          <  5:169055/148‑1 (MQ=255)
                                                                       cTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTg                                                                          >  6:169055/1‑148 (MQ=255)
                                                                            aCAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGCCAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACaa                                                                    <  1:315308/149‑1 (MQ=255)
                                                                            aCAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACaa                                                                    <  1:204820/149‑1 (MQ=255)
                                                                              aaaGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATc                                                                  <  1:118318/149‑1 (MQ=255)
                                                                                aGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATccc                                                                >  8:49680/1‑149 (MQ=255)
                                                                                 ggCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATcccc                                                               >  2:370203/1‑149 (MQ=255)
                                                                                    cGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCccgc                                                            >  1:9444/1‑149 (MQ=255)
                                                                                         cGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTg                                                       <  3:403702/149‑1 (MQ=255)
                                                                                           tgtTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTc                                                     <  2:346933/149‑1 (MQ=255)
                                                                                            gtTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTcc                                                    >  5:75938/1‑149 (MQ=255)
                                                                                                ccTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGCCCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCggg                                                >  4:408926/1‑149 (MQ=255)
                                                                                                 cTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCggg                                                >  8:51779/1‑148 (MQ=255)
                                                                                                  tGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCggg                                                >  1:351824/1‑147 (MQ=255)
                                                                                                    gCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGgcag                                             <  5:436523/148‑1 (MQ=255)
                                                                                                    gCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGgca                                              <  6:203107/147‑1 (MQ=255)
                                                                                                          ccccGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGAcc                                      >  6:386799/1‑149 (MQ=255)
                                                                                                            ccGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGt                                    <  7:51779/149‑1 (MQ=255)
                                                                                                              gTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGCCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTAc                                  <  7:319260/149‑1 (MQ=255)
                                                                                                               tACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACt                                 <  2:9444/149‑1 (MQ=255)
                                                                                                                aCCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTc                                >  6:65547/1‑149 (MQ=255)
                                                                                                                   cgcgCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGa                              >  6:409390/1‑148 (MQ=255)
                                                                                                                    gcgcCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACa                            <  1:370203/149‑1 (MQ=255)
                                                                                                                       ccTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGc                          >  4:169903/1‑148 (MQ=255)
                                                                                                                        ctgctgTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCg                         >  7:247494/1‑148 (MQ=255)
                                                                                                                        ctgctgTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCg                         >  8:351107/1‑148 (MQ=255)
                                                                                                                         tgctgTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGaa                       >  4:79714/1‑149 (MQ=255)
                                                                                                                           cacggcctGACCGCCGAGCAGGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACt                     >  4:217317/8‑149 (MQ=255)
                                                                                                                             gTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGa                   >  8:406577/1‑149 (MQ=255)
                                                                                                                              ttATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTg                    <  3:214831/147‑1 (MQ=255)
                                                                                                                                aTTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGAtt                 <  3:369245/148‑1 (MQ=255)
                                                                                                                                 ttGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACACGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTc                <  8:247494/148‑1 (MQ=255)
                                                                                                                                 ttGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACAGACCTCCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCTCTGTCCAGCGCAGCATGACCGTACTCGACAGCGAACTGATTcg               >  2:54720/1‑149 (MQ=255)
                                                                                                                                   gACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGCCCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGACCTGATTcgcg             >  7:167554/1‑149 (MQ=255)
                                                                                                                                   gACCGCCCTGCTCGGAGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTcgcg             >  4:337984/1‑149 (MQ=255)
                                                                                                                                    aCCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCTGCATGACCGTACTCGACAGCGAACTGATTCgcgc            <  7:406577/149‑1 (MQ=255)
                                                                                                                                    aCCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCgcgc            >  7:158164/1‑149 (MQ=255)
                                                                                                                                         ccTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCGCGCCAGCg       <  1:254599/149‑1 (MQ=255)
                                                                                                                                            gCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCGCGCCAGCGGTg    >  6:101960/1‑149 (MQ=255)
                                                                                                                                             cTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCACGCCAGCGGTGc   >  1:318463/1‑149 (MQ=255)
                                                                                                                                              tCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCGCGCCAGCGGTGcc  >  6:396040/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                     
TACTTTTCAAGACGTACGCCCGACACCCACTGGCAAAACCCCCACGGTCAGTTACCATGCCTGTTTCAATCCTGAAACAAAGGCCGCTCCGTGTTCCCTGGCACGCCCCCGTACCCGCGCCTGCTGTTATTGACCGCCCTGCTCGGCGGTCAGGCCGTGGCCGACG‑ACCTGTTCATCGACAACACCGACCTGCCACAGGTTCTGACCGCCACACGCCTGAAACAATCCCCCGCCGCTGTCCCGGGCAGCATGACCGTACTCGACAGCGAACTGATTCGCGCCAGCGGTGCC  >  NC_002947/4711679‑4711969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑