| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,735,320 | C→T | 100% | M105I (ATG→ATA) | sucA ← | 2‑oxoglutarate dehydrogenase subunit E1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,735,320 | 0 | C | T | 100.0% | 266.6 / ‑6.8 | 85 | M105I (ATG→ATA) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (39/42); minor base A (2/0); total (42/43) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
CCTCTTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGCAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACA > NC_002947/4735175‑4735464 | cctcTTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGtat‑a > 8:264230/1‑149 (MQ=255) ctctTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGtat‑a < 6:260400/148‑1 (MQ=255) tctTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑Ac > 3:127756/1‑148 (MQ=255) tctTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑Ac > 1:415287/1‑148 (MQ=255) ctTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGa > 6:379912/1‑149 (MQ=255) tGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATa < 3:409178/148‑1 (MQ=255) gCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAg < 1:222408/148‑1 (MQ=255) gCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAg < 2:140014/148‑1 (MQ=255) ccGCTGAACAGGGCGCCGGCACGGAAGGTCGTATCACGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGc < 4:75124/149‑1 (MQ=255) cGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGcc > 2:287268/1‑149 (MQ=255) cGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGcc > 1:294480/1‑149 (MQ=255) cGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGcc > 4:283843/1‑149 (MQ=255) gAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGa > 1:266348/1‑149 (MQ=255) aaCAGGTCGCCGGCTCGGATGGTCGTAACAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCTACAGGTCTACGTGCGCATGGATCTGCCACAA‑CCCCAACGGGTCTAGCTTGGCAGCCTGATGTCCGCGTAT‑ACGATAGGCCTGGa < 7:356089/148‑1 (MQ=255) aCAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACATGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATc < 6:56917/149‑1 (MQ=255) aCAGGTCGCCGGCACGCAAGGTCGTATCAAGATCGGCATTGGACAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGTCCGCGAAT‑ACGAAAGGCCTGGAt > 8:171812/1‑148 (MQ=255) cAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑TCGATAGGCCTGGAt > 2:316130/1‑147 (MQ=255) cAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAg > 8:350899/1‑139 (MQ=255) cAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAg < 7:350899/139‑1 (MQ=255) aGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAg > 7:144991/1‑149 (MQ=255) aGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAg < 7:264230/149‑1 (MQ=255) ggTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCC‑GGATCAGTc > 5:67817/1‑149 (MQ=255) gacGCCGGCACGGAAGGACTTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCTACAGGGCAACGGGCGCAGGCCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCC‑GGATCAGTc < 6:67817/146‑1 (MQ=255) gTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTc < 1:287268/149‑1 (MQ=255) gCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCg > 6:355110/1‑147 (MQ=255) gCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCg < 5:355110/147‑1 (MQ=255) cGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAg > 6:184896/1‑148 (MQ=255) gCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACTGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAAc < 7:227701/149‑1 (MQ=255) gCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAAc < 2:294480/149‑1 (MQ=255) gAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGGAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCaa > 4:37724/1‑149 (MQ=255) aGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGGAGCCTGATGGCCGCGTATCACGATAGGCCTGGATCAGTCGCAGAACTTCAAc < 1:272489/149‑1 (MQ=255) gTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTg < 3:283843/149‑1 (MQ=255) tCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCGGAACTTCAACCTGc < 3:257650/149‑1 (MQ=255) tATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGcttc < 2:266348/149‑1 (MQ=255) tCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGcttctt < 4:127756/149‑1 (MQ=255) aaGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTtcttct > 1:203474/1‑149 (MQ=255) aGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTtctc > 2:283028/1‑149 (MQ=255) ctccgCACTGGTCCCGCCGTCGCGACTCATCGACAGGGCTACCGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGTCGCGTAT‑ACGATAGGCCTGGAGCAGTCGCAGAACTTCAACCTGCTTCTTCTCgt < 8:384637/145‑1 (MQ=255) ggCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGtt < 6:73545/149‑1 (MQ=255) gCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGtt > 1:376798/1‑148 (MQ=255) gCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGtt > 7:355699/1‑148 (MQ=255) cATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCa > 4:345271/1‑149 (MQ=255) cATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCa < 3:335951/149‑1 (MQ=255) ggTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTg < 2:203474/148‑1 (MQ=255) tCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGt < 2:325000/110‑1 (MQ=255) tCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAg > 2:226654/1‑115 (MQ=255) tCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCa > 6:271878/1‑143 (MQ=255) tCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCa < 5:271878/143‑1 (MQ=255) tCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTc < 3:371706/149‑1 (MQ=255) tCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGCAT‑ACGATAGGCCTGGATCAGTCGCAg < 1:226654/115‑1 (MQ=255) tAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTccc < 8:144991/149‑1 (MQ=255) aGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCgt < 8:387695/129‑1 (MQ=255) aGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCgt > 7:387695/1‑129 (MQ=255) attgatCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCAc > 3:49825/1‑138 (MQ=255) attgatCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCAc < 4:49825/138‑1 (MQ=255) ttgatCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCcggcgg < 2:376798/148‑1 (MQ=255) gatCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGaaa > 8:213311/1‑149 (MQ=255) gACAGGTCTACGGGCGCAGGGCGCTGCCACAACCCCCAACGGGTCGAGATTGGCAGCCTGATGGCCCCGAAA‑ACGATAGGCGTGGATCAGTCGCAGAACTTCAACCTGCTACTTCTCGTGTTAACTGCTAACCCTCCCGGCGGAAACCg > 1:64992/1‑149 (MQ=255) cAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGtt < 8:355699/149‑1 (MQ=255) cAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGtt < 3:345271/149‑1 (MQ=255) tACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGggcgc > 4:106261/1‑149 (MQ=255) gcgcAGGGCGCTGCCACAA‑CCCCTACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGTACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGggcgcggcgc < 7:171812/149‑1 (MQ=255) aGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGt > 4:362380/1‑149 (MQ=255) aGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGt > 1:336573/1‑149 (MQ=255) cTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTg < 7:213311/149‑1 (MQ=255) tGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGc > 1:20749/1‑149 (MQ=255) ccACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGc < 5:184896/147‑1 (MQ=255) ccACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGc > 5:158175/1‑147 (MQ=255) cacaA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCcag < 1:283028/149‑1 (MQ=255) acaA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCcag > 6:319541/1‑148 (MQ=255) acaA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCcag > 6:325465/1‑148 (MQ=255) caA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCcag > 6:277322/1‑147 (MQ=255) ccccAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTa > 2:235112/1‑149 (MQ=255) cccAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTAc > 1:299482/1‑149 (MQ=255) cccAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTAc > 8:214347/1‑149 (MQ=255) cAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACg > 7:282260/1‑148 (MQ=255) gggTCGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATg < 3:106261/149‑1 (MQ=255) cGAGCTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTcg > 7:3380/1‑149 (MQ=255) cTTGGCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGa > 8:323085/1‑149 (MQ=255) ggCAGCCTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGAtt < 8:3380/148‑1 (MQ=255) ccTGATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAg > 8:285180/1‑149 (MQ=255) gATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTcgc > 2:248847/1‑135 (MQ=255) gATGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTcgc < 1:248847/135‑1 (MQ=255) aTGGCCGCGTAT‑ACGATAGGCCTGGATCACTCGCAGACCTTCAACCTGCTCCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGGTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAGTg < 2:144480/147‑1 (MQ=255) tGGCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGa < 2:20749/149‑1 (MQ=255) ggCCGCGTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGa < 2:415287/148‑1 (MQ=255) cgcgTAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACa < 8:282260/149‑1 (MQ=255) | CCTCTTTGCCGATGAACAGGTCGCCGGCACGGAAGGTCGTATCAAGATCGGCATTGGTCAAGCCGTAGTGATTGATCGACAGGTCTACGGGCGCAGGGCGCTGCCACAA‑CCCCAACGGGTCGAGCTTGGCAGCCTGATGGCCGCGCAT‑ACGATAGGCCTGGATCAGTCGCAGAACTTCAACCTGCTTCTTCTCGTGTTCACTGCTCACGCTCCCGGCGGAAACCGGTTGGGCGCGGCGCTGGTTCTTTGCCAGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACA > NC_002947/4735175‑4735464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |