| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,768,058 | G→C | 5.6% | P252A (CCT→GCT) ‡ | PP_4218 ← | lipase/esterase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,768,058 | 0 | G | C | 5.6% | 288.5 / 6.4 | 89 | P252A (CCT→GCT) ‡ | PP_4218 | lipase/esterase family protein |
| Reads supporting (aligned to +/- strand): ref base G (46/38); new base C (3/2); total (49/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.40e-01 | |||||||||||
ATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAAGGCCGC > NC_002947/4767913‑4768206 | atgatCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGc < 3:306091/149‑1 (MQ=255)atgatCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGc < 2:54339/149‑1 (MQ=255) aaCCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGTCAATCAGCATCAGTGCAGG‑‑TGCACTGTTg < 1:32258/149‑1 (MQ=255) cATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTgg > 6:142718/1‑149 (MQ=255) aTACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTggg > 3:201558/1‑148 (MQ=255) aTACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCAACAGTGCACC‑‑TGCACTGATGCTgat < 2:257738/149‑3 (MQ=255) aCGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGa > 2:425902/1‑149 (MQ=255) tGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTg < 2:76471/149‑1 (MQ=255) aaGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGcc > 8:315487/1‑149 (MQ=255) gTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCa < 7:315487/149‑1 (MQ=255) aTGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGc > 5:18376/1‑148 (MQ=255) tGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCaa > 7:394134/1‑149 (MQ=255) gggTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAAc > 7:338451/1‑149 (MQ=255) ggTCACTCCCGGGATCACCGCAAGCTGCCCCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACg < 5:254000/149‑1 (MQ=255) gTCACTCCCGGGATCACCGCAAGCTGGAGCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACgg < 7:17450/149‑1 (MQ=255) gTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACgg > 1:9691/1‑149 (MQ=255) cTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGa > 2:301431/1‑148 (MQ=255) tCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGaa > 2:238414/1‑148 (MQ=255) cGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCCCTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAc > 5:298871/1‑149 (MQ=255) ggATCACCGCAAGCTGCACCGCCACCCCTGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAcgc < 8:259033/149‑1 (MQ=255) tCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGa < 6:120518/149‑1 (MQ=255) aCCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATc > 7:357644/1‑149 (MQ=255) ccGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCg > 8:158404/1‑149 (MQ=255) cGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGt > 5:206260/1‑149 (MQ=255) cAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCaa < 7:371867/127‑1 (MQ=255) cAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCaa > 8:371867/1‑127 (MQ=255) gCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACgg > 8:115904/1‑149 (MQ=255) tGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTc > 8:325240/1‑149 (MQ=255) cACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACg < 5:429814/122‑1 (MQ=255) cACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACg > 6:429814/1‑122 (MQ=255) cGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCg < 8:357644/149‑1 (MQ=255) aCCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCAc > 4:55002/1‑149 (MQ=255) cccGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGc < 6:268644/96‑1 (MQ=255) cccGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGc > 5:268644/1‑96 (MQ=255) gCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGc < 6:123726/149‑1 (MQ=255) ttGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGtt > 6:11039/1‑84 (MQ=255) ttGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGtt < 5:11039/84‑1 (MQ=255) cTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTAtt < 1:425902/149‑1 (MQ=255) cAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCt > 3:245360/1‑149 (MQ=255) cAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCt < 8:394134/149‑1 (MQ=255) aGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTgg < 3:55002/149‑1 (MQ=255) aGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTgg < 2:9691/149‑1 (MQ=255) gTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGt < 6:206260/149‑1 (MQ=255) ccGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGGATGCAATGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAACCGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGt > 1:130753/1‑148 (MQ=255) gCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCa > 1:181280/1‑149 (MQ=255) ccTGGTCATGCAGCGGGTCGGACTCGGCAATCAGCATCTGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCAGTCCAg < 6:442569/142‑1 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGTCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTgc > 2:98884/1‑149 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCt < 8:30671/126‑1 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCt > 7:30671/1‑126 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAAc < 3:46723/134‑1 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAAc > 4:46723/1‑134 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTgc > 5:442571/1‑149 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTgc > 3:265607/1‑149 (MQ=255) ccTGGTCATGCAGCGGGTCGCACTCGCCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGATGGCGCCGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCCTGGCGTATTGCTGGTAGAACCACTGCAg > 5:442569/1‑142 (MQ=255) tCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTc < 7:372442/149‑1 (MQ=255) aTGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTc > 3:190280/1‑147 (MQ=255) tGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGATGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAg > 5:279071/1‑149 (MQ=255) aGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAg < 8:338451/149‑1 (MQ=255) cACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCt > 2:167800/1‑149 (MQ=255) cACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCt > 4:52067/1‑149 (MQ=255) aCTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTg > 1:293838/1‑149 (MQ=255) aCTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTg > 7:2346/1‑149 (MQ=255) cTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGc < 7:325240/149‑1 (MQ=255) ggCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCGCCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTACCa > 5:140776/1‑148 (MQ=255) ggCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGcc < 1:167800/147‑1 (MQ=255) aaTCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCa > 3:162886/1‑131 (MQ=255) aaTCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCa < 4:162886/131‑1 (MQ=255) aaTCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAgc < 6:18376/149‑1 (MQ=255) aaTCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAgc > 8:296079/1‑149 (MQ=255) aTCAGCATCAGTGCAGG‑‑TGCACTGTGGCTGGCGACGCTGCCCAGCAACGGTTAAAAACGCGGATCGTGACTGTCTGCCGGCACCGTGTCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAgcg < 1:365484/149‑1 (MQ=255) cAGCAACAGTGCACC‑‑TGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCt > 1:403088/1‑149 (MQ=255) aGCATTAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAgg > 6:226149/1‑111 (MQ=255) aGCATTAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAgg < 5:226149/111‑1 (MQ=255) gCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTg > 7:61887/1‑148 (MQ=255) gCAACAGTGCACC‑‑TGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTg > 3:219290/1‑148 (MQ=255) cATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGGCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCa < 1:301431/149‑1 (MQ=255) aacAGTGCACC‑‑TGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCAc > 5:289467/3‑149 (MQ=255) aTCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGATGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCAc < 6:279071/149‑1 (MQ=255) aTCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCAc > 4:405061/1‑149 (MQ=255) tCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCAcc > 1:352400/1‑149 (MQ=255) aGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCg > 8:52779/1‑148 (MQ=255) aGTGCAGG‑‑TGAACTGTTGCTGGCTACGCTGCCCAGCAACGCTGAAAAACGACGATCGTGAACTTCTGCCGGCACCGTGGCGTATTCCTGTTAGAACCACTCCAGCGTCTGCGCTTCAAGCACGTAACCGCTGCCATACCGCTGCAcac > 4:345317/1‑146 (MQ=255) gTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCATCAACGGTGAAAAACGCGGATGGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa < 8:166948/149‑1 (MQ=255) gTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa < 7:241749/149‑1 (MQ=255) gTGCACC‑‑TGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa < 6:289467/149‑1 (MQ=255) tGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAgc < 3:66077/137‑1 (MQ=255) tGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAgc > 4:66077/1‑137 (MQ=255) tGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAAg < 7:115904/149‑1 (MQ=255) cAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAAgg < 3:345317/148‑1 (MQ=255) g‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAAGgccgc < 4:245360/149‑1 (MQ=255) | ATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGG‑‑TGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAAGGCCGC > NC_002947/4767913‑4768206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |