| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,783,691 | C→T | 8.4% | R1208Q (CGG→CAG) | pvdJ ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,783,691 | 0 | C | T | 8.4% | 274.0 / 10.0 | 95 | R1208Q (CGG→CAG) | pvdJ | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base C (47/40); new base T (4/4); total (51/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCTGCACCGGTGT > NC_002947/4783543‑4783839 | tCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGcc > 4:227867/1‑149 (MQ=255) cgcgCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGGCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCg < 8:79922/149‑1 (MQ=255) cgcCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGCATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGtt > 7:351500/1‑149 (MQ=255) aTTGGCGCATGGGTGGCGACGTGTAGGGCAGGCTCACCGCCTTCGCTAGGCTAGCCTGCTGGTTGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACGGCTGTTGCTgg < 6:328705/149‑2 (MQ=255) aTTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACGGCTGTTGCTgg < 6:139184/149‑2 (MQ=255) aTTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGa > 8:257843/1‑149 (MQ=255) ttGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGAc < 4:90831/149‑1 (MQ=255) ggCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCa > 8:92438/1‑149 (MQ=255) gcgcAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCAt > 4:395676/1‑149 (MQ=255) aGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGc < 6:86518/149‑1 (MQ=255) gggTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGa < 3:106071/149‑1 (MQ=255) cGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATTCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGa < 6:96620/149‑1 (MQ=255) aCCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGaa > 4:23051/1‑148 (MQ=255) ccTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACa < 7:92438/149‑1 (MQ=255) cTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACaa < 3:375608/149‑1 (MQ=255) cTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACaa > 6:228913/1‑149 (MQ=255) aCGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTc < 7:145529/149‑1 (MQ=255) aCGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCACGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTc > 8:352892/1‑149 (MQ=255) aGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGTCAGCAACGGCTGTTGCTggcgg < 3:350855/123‑5 (MQ=255) aGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGTCAGCAACGGCTGTTGCTggcgg > 4:350855/1‑119 (MQ=255) cTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGaa < 7:257843/149‑1 (MQ=255) cTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGaa > 5:238814/1‑149 (MQ=255) tCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTc > 7:196371/1‑130 (MQ=255) tCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTc < 8:196371/130‑1 (MQ=255) tCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGaa > 4:366466/1‑148 (MQ=255) cGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCt > 2:189414/1‑149 (MQ=255) gCCTGCCCTAGGCTACCCTGCTGGTAGGCCGTCTGCAGTTCTTCGAACAGGATGCGCCAGGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTc > 6:95077/1‑149 (MQ=255) cTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGc > 3:201675/1‑149 (MQ=255) ccTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACg > 4:7676/1‑149 (MQ=255) ccTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACg > 8:27540/1‑149 (MQ=255) ccTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACg > 8:288068/1‑149 (MQ=255) cTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTTTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACgg < 2:105604/149‑1 (MQ=255) cTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACTGACGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACgg < 7:85052/149‑1 (MQ=255) tAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACggg > 7:35417/1‑149 (MQ=255) tAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACggg > 7:28963/1‑149 (MQ=255) tAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACggg > 7:180890/1‑149 (MQ=255) cTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAg > 4:78362/1‑149 (MQ=255) gCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAgg < 1:189414/147‑1 (MQ=255) ctgGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGc > 4:41108/1‑149 (MQ=255) tgGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCACCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCt > 3:288660/1‑149 (MQ=255) tAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGc > 4:135784/1‑149 (MQ=255) gTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCAc > 1:171590/1‑149 (MQ=255) aGGTCTTCGTACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGtt > 3:75452/1‑149 (MQ=255) aGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGtt < 3:41108/149‑1 (MQ=255) gTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTgg > 5:269134/1‑149 (MQ=255) tCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTggc < 3:7676/149‑1 (MQ=255) ttCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTggcgg > 1:220374/1‑149 (MQ=255) cGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTggcgg < 6:238814/147‑1 (MQ=255) gAACAGGATGCGCCAGGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGcggcgg < 5:95077/149‑1 (MQ=255) gAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGgcggcg < 3:78362/148‑1 (MQ=255) gAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGgcggcg < 6:332066/148‑1 (MQ=255) gAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGcggcgg < 7:352892/149‑1 (MQ=255) aaCAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGt > 1:75816/1‑149 (MQ=255) aaCAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGt < 5:228913/149‑1 (MQ=255) aGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTc < 8:180890/149‑1 (MQ=255) aGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTc < 7:28417/149‑1 (MQ=255) ggATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCt < 7:288068/149‑1 (MQ=255) gcgcCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAgcg > 8:108183/1‑149 (MQ=255) gcgcCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAgcg > 6:402577/1‑149 (MQ=255) gcCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCt < 2:425998/149‑1 (MQ=255) gcCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACAATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCt > 6:417186/1‑149 (MQ=255) acacCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAgg < 6:269134/149‑1 (MQ=255) acacCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAgg < 3:227867/149‑1 (MQ=255) acCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCt > 7:37957/1‑149 (MQ=255) ccccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTg > 6:398593/1‑149 (MQ=255) cccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGt > 3:115696/1‑149 (MQ=255) cccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGt > 2:420993/1‑149 (MQ=255) cccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGt > 3:32593/1‑149 (MQ=255) cccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGt > 5:434972/1‑149 (MQ=255) cccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCAAGGGCCAGGTCGAGGCGGGCCTGCACCTCGTTGTCGGCGGGTTCTAGAGCTGCAAGGCAGt > 8:307500/1‑149 (MQ=255) ccATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTc < 3:23051/149‑1 (MQ=255) aTCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCa < 3:135784/149‑1 (MQ=255) ccaccaccaGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCa > 7:213870/1‑147 (MQ=255) caccaccaGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCagag > 2:299747/1‑149 (MQ=255) accaccaGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTggcggc > 1:213324/1‑119 (MQ=255) accaccaGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTggcggc < 2:213324/119‑1 (MQ=255) caccaGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGa < 8:255313/149‑1 (MQ=255) aGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTAc < 4:107255/149‑1 (MQ=255) gTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCt > 8:78747/1‑149 (MQ=255) tGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCag < 7:78747/149‑1 (MQ=255) gCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCag > 4:47617/1‑148 (MQ=255) cACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCag > 6:347176/1‑147 (MQ=255) aCCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAgcg > 2:257086/1‑115 (MQ=255) aCCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAgcg < 1:257086/115‑1 (MQ=255) aCCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCaggag < 5:417186/149‑1 (MQ=255) tgctcAGCAACGGCTCTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCACGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCaggagg > 6:426200/5‑149 (MQ=255) ccaccAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCaggagg < 4:288660/146‑1 (MQ=255) cGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAggg > 7:85634/1‑149 (MQ=255) gCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGc < 8:28963/149‑1 (MQ=255) gCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGc < 8:35417/149‑1 (MQ=255) gCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGc < 2:75816/149‑1 (MQ=255) tcAGCAACGGCTGTTGCTGGCCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGcc > 3:258764/2‑149 (MQ=255) tcAGCAACGGCTGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGcc < 5:426200/148‑1 (MQ=255) cAGCAACGGCTGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCAGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCt > 8:58025/1‑149 (MQ=255) cAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCt < 8:37957/149‑1 (MQ=255) aGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACTGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCTGCACCgg > 1:305098/1‑149 (MQ=255) ccGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCTGCACCGgtg > 3:360630/1‑149 (MQ=255) cGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCTGCACCGgtgt > 3:382228/1‑149 (MQ=255) | TCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGACCATCGGCGAGTTCGAACAATGTCGCCCTGAACAGCTCGCCACGGGCCAGGTCGAGGCTGGCCTGCACCTCGTTGGCGGCGGTTTCTAGCGCTGCAAGGCTGTCCAGAGTGACTACCTGCAGGAGGGCCTGCACCGGTGT > NC_002947/4783543‑4783839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |