| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,851,711 | A→T | 5.6% | intergenic (+103/+16) | apt → / ← recR | adenine phosphoribosyltransferase/recombination protein RecR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,851,711 | 0 | A | T | 5.6% | 269.8 / 4.6 | 90 | intergenic (+103/+16) | apt/recR | adenine phosphoribosyltransferase/recombination protein RecR |
| Reads supporting (aligned to +/- strand): ref base A (42/43); new base T (2/3); total (44/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.42e-01 | |||||||||||
CTACCTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTCAGCAACTGG > NC_002947/4851568‑4851859 | cTACCTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAGAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCgg > 4:241771/1‑149 (MQ=255) tACCTTCTGCCTGACCGAGTTTTCCCTTAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGc > 4:417680/1‑149 (MQ=255) tACCTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGc > 8:308767/1‑149 (MQ=255) aCCTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGcc > 2:125278/1‑149 (MQ=255) ccTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGc < 8:234049/147‑1 (MQ=255) ccTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGGGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTTCGCAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGGCGCTTGGCGGcc < 7:29476/148‑1 (MQ=38) gCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATg > 5:281180/1‑148 (MQ=255) ccTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAAt < 6:104245/146‑1 (MQ=255) ccTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGa < 6:233136/148‑1 (MQ=255) ccTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAAGGGGCCGCTTGGCGGcccattc < 2:155300/146‑5 (MQ=38) tGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAAGGGGCCGCTTGGCGGccc > 1:29182/1‑140 (MQ=255) tGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAAGGGGCCGCTTGGCGGccc < 2:29182/140‑1 (MQ=255) gACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGa < 6:319098/145‑1 (MQ=255) gACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGa > 5:319098/1‑145 (MQ=255) cGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCagag > 3:128611/1‑149 (MQ=255) cGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCaga < 4:47620/148‑1 (MQ=255) cGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCa > 3:47620/1‑146 (MQ=255) tttCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTATGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGaaa > 7:164688/1‑149 (MQ=255) ttCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAAt > 8:27079/1‑149 (MQ=255) tCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATg > 2:36908/1‑149 (MQ=255) ccTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATgg < 4:128611/148‑1 (MQ=255) ccTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATgg < 7:199392/148‑1 (MQ=255) aGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGcc < 6:29712/149‑1 (MQ=255) gTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGccc < 2:248408/149‑1 (MQ=255) aTTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTg > 8:399434/1‑149 (MQ=255) ttGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGCTGAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTg < 1:114561/149‑1 (MQ=255) ttGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGc < 2:310670/149‑1 (MQ=255) aGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCaaa < 3:417680/149‑1 (MQ=255) aGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCGACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAAGCAGAGCGAAATGGGCCGGCGCCCTGccac > 8:62951/1‑146 (MQ=255) aGTGGGCTTTTGGGGCGGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCaa < 4:410255/148‑1 (MQ=255) tGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAg < 2:341899/148‑1 (MQ=255) gggCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAg < 7:318835/149‑1 (MQ=255) ggCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAg‑g < 7:308767/149‑1 (MQ=255) tgctTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTa > 7:388089/1‑149 (MQ=255) gctTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCag < 2:97879/106‑1 (MQ=255) gctTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCag > 1:97879/1‑106 (MQ=255) ttttCAGCCGATTCGCTGATAAACCCTCTCCTACTAAAGCCGTGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTAccg < 1:361571/149‑1 (MQ=38) tGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTAccgcc > 4:71449/1‑149 (MQ=255) aGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTc > 5:402891/1‑149 (MQ=255) gCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTcc > 2:79992/1‑149 (MQ=255) cccATTCGCGGGTACACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTcca < 7:62951/149‑1 (MQ=255) cccATTCGCGGGTAAACCCGCTCCTACGAGAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTcca < 3:241771/149‑1 (MQ=255) cccATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGcc > 6:161537/1‑116 (MQ=255) cccATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGcc < 5:161537/116‑1 (MQ=255) cccATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTcca > 8:176401/1‑149 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTccacc < 2:45470/149‑1 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTccac > 4:144271/1‑148 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTccacca < 7:176401/149‑1 (MQ=255) tCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCAtc > 7:229087/1‑149 (MQ=255) gcgGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCAtctc > 2:405989/1‑149 (MQ=255) gcgGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGCCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCAtctc < 1:36908/149‑1 (MQ=255) gagggTAAACCCGCTCCTACGAATGCCGCGTATGTTTTGTAGGCGCGTGTTTACCCTC‑GAATGTGCCGCCAAGCGGCCCCAATGAATCAGAGAGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCAtctc < 8:7348/147‑1 (MQ=255) cgGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCAtctc > 1:421682/1‑148 (MQ=255) cgGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTcc < 7:27079/149‑1 (MQ=255) gggTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCa < 3:287470/149‑1 (MQ=255) ggTAAACCCGCTCCTACGAACGCCGCGTTTGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAg < 6:402891/149‑1 (MQ=255) aCCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTcgc > 1:205820/1‑149 (MQ=255) cTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGccc < 2:284798/149‑1 (MQ=255) tCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCgccgcc > 2:322527/1‑147 (MQ=255) cTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGt < 8:388089/149‑1 (MQ=255) cGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTgg < 2:421682/148‑1 (MQ=255) cGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTg < 2:375614/147‑1 (MQ=255) cGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGc < 8:164688/149‑1 (MQ=255) aaGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGcaca > 2:388263/1‑149 (MQ=255) cgcgTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCAt > 3:368230/1‑149 (MQ=255) gTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAAt > 3:223259/1‑149 (MQ=255) ttGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGc < 1:322527/148‑1 (MQ=255) tAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCgaga > 3:229244/1‑149 (MQ=255) tAGGCGCGGGTTAACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGCATCAGCGCGAAATGTGCCCGCGCCCTGCAAAGGCATGGGCCAC‑GGAACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGCCACCCCATGGGCAAAGCgaga > 3:316767/1‑149 (MQ=255) attcgcgGGTAAACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGt > 4:350778/4‑125 (MQ=255) attcgcgGGTAAACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGt < 3:350778/122‑1 (MQ=255) ttcgcgGGTAAACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACg > 8:263583/3‑149 (MQ=255) ggCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAGCAGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCgaga < 1:125278/148‑1 (MQ=255) cgGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGccac < 1:79992/149‑1 (MQ=255) gTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGccacc > 7:168183/1‑147 (MQ=255) tACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGcc > 3:155258/1‑149 (MQ=255) ccGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAAt > 2:6841/1‑128 (MQ=255) ccGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAAt < 1:6841/128‑1 (MQ=255) ccGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCtt > 5:60456/1‑149 (MQ=255) ccGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCt > 8:103008/1‑148 (MQ=255) cgc‑gAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTtc > 6:29823/1‑149 (MQ=255) gc‑gAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTtct > 1:396109/1‑149 (MQ=255) c‑gAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTtctc < 7:399434/149‑1 (MQ=255) ttggggCCGCTTGGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGc > 7:221919/4‑149 (MQ=255) aTGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCt < 8:168183/149‑1 (MQ=255) tGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTc < 1:405989/149‑1 (MQ=255) ggCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTCa < 7:103008/148‑1 (MQ=255) ggCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTCAg > 5:43603/1‑149 (MQ=255) gccAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTCAGCAAc < 2:396109/149‑1 (MQ=255) cAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGAAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATATCCAGCTCGCCGCCCAGTGGCAAACCATGGGCAATGCGAGACGCCACCAAGCCATTCTCGCTCAGCAACTg > 4:57856/1‑149 (MQ=255) aaGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTCAGCAACTgg < 3:71449/149‑1 (MQ=255) | CTACCTTCTGCCTGACCGAGTTTTCCCTCAGCGAGTATTGAGTGGGCTTTTGGGGCTGCTTTGCAGCCCATTCGCGGGTAAACCCGCTCCTACGAAAGCCGCGTATGTTTTGTAGGCGCGGGTTTACCCGC‑GAATGGGCCGCCAAGCGGCCCCAATGAATCAGAGCGAAATGGGCCGGCGCCCTGCAAAGGCATGGGCCAG‑GGTACCGCCGTCCACCATCTCCAGCTCGCCGCCCAGTGGCACACCATGGGCAATGCGAGACGCCACCAAGCCCTTCTCGCTCAGCAACTGG > NC_002947/4851568‑4851859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |