Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,880,867 | A→T | 6.2% | intergenic (+136/‑51) | PP_4289 → / → uacT | membrane protein/uric acid permease |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,880,867 | 0 | A | T | 6.2% | 239.5 / 5.0 | 81 | intergenic (+136/‑51) | PP_4289/uacT | membrane protein/uric acid permease |
Reads supporting (aligned to +/- strand): ref base A (35/41); new base T (2/3); total (37/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.89e-01 |
ACTGACAGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGCAACACGTTCTG > NC_002947/4880727‑4881013 | aCTGACAGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCt > 2:380876/1‑149 (MQ=255) cTGACAGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTg > 2:252631/1‑149 (MQ=255) tGACAGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGc > 8:192298/1‑149 (MQ=255) cAGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGc < 8:375419/149‑1 (MQ=255) aGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCG‑GCAGGCTTCATGCCTGcgcgct < 3:171136/149‑6 (MQ=255) aGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCG‑GCAGGCTTCATGCCTGcgcgct < 4:98185/149‑6 (MQ=255) gCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCtt < 4:228401/149‑1 (MQ=255) gCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCtt < 1:286300/149‑1 (MQ=255) gCACCTCGCCAGGCAACCCGCCACCCAAGGTAATCACCTTCCCCGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCtt < 2:341930/149‑1 (MQ=255) cACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCAt < 3:86758/134‑1 (MQ=255) cACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCAt > 4:86758/1‑134 (MQ=255) cACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTg > 7:44348/1‑149 (MQ=255) cTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGAt > 8:69891/1‑149 (MQ=255) aGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCgag > 1:274629/1‑148 (MQ=255) gCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTGCATGTGTTACGGAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGaa > 1:294877/1‑148 (MQ=255) gCAACCCGCCCCCCAAGGGAAGCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAAt < 6:288529/149‑1 (MQ=255) aCCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATaaa < 8:345571/149‑1 (MQ=255) aCCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATaaa < 7:397388/149‑1 (MQ=255) cccGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGATGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATaaaa < 5:390051/149‑1 (MQ=255) cccGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATaaaa < 4:21256/149‑1 (MQ=255) cccGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATaaa > 5:83254/1‑148 (MQ=255) ccGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATaaaaa > 6:162457/1‑149 (MQ=255) cccAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAaaaacaaaa > 2:139459/1‑148 (MQ=255) cccAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCACAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAaaaacaaaac > 1:270730/1‑149 (MQ=255) gggAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAg < 1:173842/149‑1 (MQ=255) gAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCGTGGCTCCGAGAATAACAACAAAACTCGAGGt > 8:161665/1‑149 (MQ=255) aaTCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGtg < 4:107962/149‑1 (MQ=255) aTCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAggcg < 4:263315/148‑3 (MQ=255) aTCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGtgc > 7:357999/1‑149 (MQ=255) aCCTTCCCCTGCAGGAGGGGGATTGCCCGCGAAGAGTCCTATAGCCCGAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGtgctgc < 5:296393/149‑1 (MQ=255) aCCTTCCCCTGCAGGAGCGGGCTTGACCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCCAGGtgctg > 8:367288/1‑148 (MQ=255) cTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGa < 7:192298/149‑1 (MQ=255) cTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGa < 1:139459/149‑1 (MQ=255) cAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCTCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGt < 1:407425/148‑1 (MQ=255) cAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCATGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATCTCCGact > 4:311217/1‑146 (MQ=255) gAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACg < 2:227014/149‑1 (MQ=255) gCTTGCCCGCGAAGAGGCCTATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGc < 1:252631/149‑1 (MQ=255) gCTTGCCCGCGAAGAGGCAGATAGCCCCAGCCTCAAGCTCCCTGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGc < 4:264752/149‑1 (MQ=255) cccGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGtata > 7:197236/1‑149 (MQ=255) cccGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCAGCATGTACCAGTCACGCAAGGCGtatc > 4:57533/1‑148 (MQ=255) ccGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAg > 8:50266/1‑141 (MQ=255) ccGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAg < 7:50266/141‑1 (MQ=255) cgcgAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATc < 6:83254/149‑1 (MQ=255) cgAAGAGGCAGATAGCCCCAGCCTCAATCTCCATGTGTTACGCAACAAGCAATCATCGAGCGCGCAGGCATGAAGACTTCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATccc < 3:57533/149‑1 (MQ=255) gAAGAGGCCTATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAAGAATACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATcc < 3:311217/147‑1 (MQ=255) ggCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTgc < 5:162457/149‑1 (MQ=255) gCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTgcg > 6:366776/1‑149 (MQ=255) gATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGcgccg < 8:44348/149‑1 (MQ=255) tAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGcgccgcc < 5:90181/149‑1 (MQ=255) ccAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCTGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCcgcgc > 3:149039/1‑148 (MQ=255) ccAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCcgcgc > 3:141004/1‑148 (MQ=255) aaGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCTGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCtt < 4:149039/148‑1 (MQ=255) aGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCcgcgcgtggtggc > 3:182220/1‑140 (MQ=255) gCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAATCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGcc < 2:270730/149‑1 (MQ=255) cTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGccc > 3:206926/1‑149 (MQ=255) cATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAg > 2:103465/1‑107 (MQ=255) cATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAg < 1:103465/107‑1 (MQ=255) cATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTg < 5:366776/149‑1 (MQ=255) aTGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGtat > 6:287553/1‑112 (MQ=255) aTGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGtat < 5:287553/112‑1 (MQ=255) ttACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCaa < 2:60260/149‑1 (MQ=255) aCGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAAc < 4:206926/148‑1 (MQ=255) gCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGa > 5:287149/1‑149 (MQ=255) aacaaGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCAc < 3:239677/90‑1 (MQ=255) aacaaGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCAc > 4:239677/1‑90 (MQ=255) aacaaGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATc > 4:16877/1‑149 (MQ=255) caagcaagCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCt > 3:425405/1‑149 (MQ=255) agcaagcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTgg < 7:367288/149‑1 (MQ=255) aagcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTg > 5:441369/1‑149 (MQ=255) aagcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTg > 7:328869/1‑149 (MQ=255) aagcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTg > 4:25036/1‑149 (MQ=255) aagcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTg > 7:135456/1‑149 (MQ=255) aagcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTg < 5:422740/149‑1 (MQ=255) gcaTCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGc > 4:60278/1‑149 (MQ=255) gAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGc < 2:274629/148‑1 (MQ=255) agcggcAGGCTTCATGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGt < 5:2207/134‑1 (MQ=255) agcggcAGGCTTCATGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGt > 6:2207/5‑138 (MQ=255) gcggcAGGCTTCATGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGCAaca > 5:264627/4‑149 (MQ=255) cgcAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGCAACACg < 2:294877/149‑1 (MQ=255) aGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGCAACACGTTc < 3:25036/149‑1 (MQ=255) gCATGAAGCCTGCCGGTTGGATCCGAGAATAAAAACAAAAGTGGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGCAACACGTTctg < 1:380876/149‑1 (MQ=255) | ACTGACAGCACCTCGCCAGGCAACCCGCCCCCCAAGGGAATCACCTTCCCCTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGATAGCCCCAGCCTCAAGCTCCATGTGTTACGCAACAAGCAAGCATCGAGCGCGCAGGCATGAAGCCTGCCGCTTGGATCCGAGAATAAAAACAAAACTCGAGGTGCTGCATGTCCGAGTCACGCAAGGCGTATATCCCCATTGCGCCGCCGCGCGAACCCTTGCCCCTGTTCCAACTGATCCTGGTTGGCCTGCAACACGTTCTG > NC_002947/4880727‑4881013 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |