| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,915,748 | C→T | 6.6% | G114S (GGC→AGC) | ccmC ← | protoheme IX reservoir complex subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,915,748 | 0 | C | T | 6.6% | 264.5 / 4.3 | 90 | G114S (GGC→AGC) | ccmC | protoheme IX reservoir complex subunit |
| Reads supporting (aligned to +/- strand): ref base C (40/44); new base T (3/3); total (43/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.14e-01 | |||||||||||
CACAGGCCTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATCGCCGCC > NC_002947/4915601‑4915893 | cacaGGCCTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCg < 3:34079/149‑1 (MQ=255)cacaGGCCTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCg < 6:136773/149‑1 (MQ=255) aGGCCTTGGCCGTACTATCACGATTACTGATCGCCTGGCCTAGCGCAAATATGCCGAAGTACAGGATCAGCAGGATGAGCTTGTACGTAAGGCGGGCATCGGACACCCACCAGCTGCCCCAGTTCGGCTTGCCCCAGATGGCG‑CCGGTa < 4:354706/149‑1 (MQ=255) aGGCCTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGt > 3:286804/1‑148 (MQ=255) ccTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACACGAACAGCAGGATGAGCATGTACGTAAGGAGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAAc > 7:304806/1‑148 (MQ=255) cTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCa < 2:12296/149‑1 (MQ=255) ttGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAg > 8:201779/1‑149 (MQ=255) ttGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAg > 7:149561/1‑149 (MQ=255) cGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCa > 2:360271/1‑149 (MQ=255) aCTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CTGGTTACCGGCGCCatct < 3:42245/149‑4 (MQ=255) cTATCACGATTCCTCATCGCCTGGCCCAGCGAAATAATGCCGAAGAACAGCAACAGCAGTATCAGAATGCCCGTACGGCGGCCACAGCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCAcggc < 1:347983/149‑1 (MQ=255) tATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCAcggc‑g > 1:293183/1‑149 (MQ=255) aCTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAg < 7:1182/148‑1 (MQ=255) tGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGgcg > 3:322695/1‑149 (MQ=255) tGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGgcg > 7:254873/1‑149 (MQ=255) tGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGgcg > 3:428530/1‑149 (MQ=255) gATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGgcgc > 3:136223/1‑149 (MQ=255) aTCGCTTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCCTCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGCTGGCG‑CCGGTAACCCGCGCCCCGGC‑GGTCATCCAGGCGcc > 2:399165/1‑149 (MQ=255) tCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCCGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCCCCACGGC‑GGACATCCAgccgcc > 5:402820/1‑148 (MQ=255) ccTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CTGGTTACCGGCGcc < 1:351683/125‑1 (MQ=255) ccTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CTGGTTACCGGCGcc > 2:351683/1‑125 (MQ=255) cTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATgg > 4:236085/1‑149 (MQ=255) gCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGgc < 1:360271/148‑1 (MQ=255) cccAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGgcgc < 4:136223/149‑1 (MQ=255) cccAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGgcgc > 8:300483/1‑149 (MQ=255) ccAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGcgcg > 5:260236/1‑149 (MQ=255) ataatGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTg < 2:176194/149‑1 (MQ=255) atGCCGCAGTACAGGAACAGCAGGATGAGCCTGGACGGACGGCGGGCATCCCACCCCCACCAGCTGCCCCAGGGCGGCTTGCCCCAGAGGGCG‑CCGGTAACCAGCGCCCCGGC‑GGGCATCCAGGCGCCAATGGGCGCGGCACACTGCAg < 1:399165/149‑1 (MQ=255) tGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAgg < 4:344635/149‑1 (MQ=255) ccGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCGCCCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAggg < 1:119927/149‑1 (MQ=255) ccGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGc > 4:141625/1‑149 (MQ=255) cGAAGTACAGGAACAGCACGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATTGGCGCGGCACACTGCGGGGc < 6:444553/148‑1 (MQ=255) gAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGa < 3:141625/149‑1 (MQ=255) ggAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGcc < 4:428530/149‑1 (MQ=255) gAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGc > 6:60827/1‑147 (MQ=255) gAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGc > 4:50656/1‑147 (MQ=255) gAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGc > 8:409390/1‑147 (MQ=255) cagcagGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGtt > 4:361139/1‑149 (MQ=255) agcagGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGttt > 1:388797/1‑149 (MQ=255) cagGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCa > 5:174696/1‑149 (MQ=255) aGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCca < 4:322695/149‑1 (MQ=255) ggACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCacac > 5:440915/1‑147 (MQ=255) gTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTc < 5:15362/138‑1 (MQ=255) gTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTc > 6:15362/1‑138 (MQ=255) aGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCccac < 2:388797/149‑1 (MQ=255) aGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCccac > 2:289733/1‑149 (MQ=255) gCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCccacca > 4:195567/1‑149 (MQ=255) cATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCg < 3:50656/149‑1 (MQ=255) cccACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGc > 5:344282/1‑148 (MQ=255) cacaACCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATGAAGTCGCCAATGGGCTCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCAAACCAGCCACACCACCCCGGCCAc > 7:62950/1‑149 (MQ=255) cacccaccAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCg < 6:174696/149‑1 (MQ=255) cccaccAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGc > 2:5182/1‑148 (MQ=255) ccaccaGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCca < 1:289733/149‑1 (MQ=255) ccaccaGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCca < 2:293183/149‑1 (MQ=255) caccaGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCCCCCCGGCCACCGCcag > 4:283333/1‑149 (MQ=255) accaGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCcagc < 1:145345/149‑1 (MQ=255) caGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGCGGGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACCCCAGCCCCACCACCCCGGCCACCGCcag > 1:332042/1‑147 (MQ=255) aGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATACAGGCGCCAATGGGCGCGGCACACTGCAGGGCGAAGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCCGCCACCGCCagcagc > 6:310004/1‑149 (MQ=255) gCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGTCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCGCGGCCACCGCCAgcagca < 8:304806/149‑1 (MQ=255) gCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGcaca > 3:264929/1‑148 (MQ=255) ccccAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCacac > 8:138526/1‑113 (MQ=255) ccccAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCacac < 7:138526/113‑1 (MQ=255) ccccAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGcaca < 8:149561/147‑1 (MQ=255) ccccAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACAt < 3:236085/148‑1 (MQ=255) cccAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAg < 1:40372/149‑1 (MQ=255) aGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAg < 4:286804/149‑1 (MQ=255) aGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAg > 8:346640/1‑149 (MQ=255) aGGGCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAg < 4:149372/149‑1 (MQ=255) gTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGa < 6:260236/149‑1 (MQ=255) gTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGa < 6:440915/149‑1 (MQ=255) ggCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACt < 3:195567/148‑1 (MQ=255) gCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTgc < 3:283333/149‑1 (MQ=255) ttGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACAt < 6:85414/136‑1 (MQ=255) ttGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACAt > 5:85414/1‑136 (MQ=255) gCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTgcgc > 5:188075/1‑147 (MQ=255) gCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTgcgc < 7:300483/147‑1 (MQ=255) gCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGcc < 7:409390/148‑1 (MQ=255) cccccATATGCGG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCACGCGCCAATGGGCGCGGCACACTGCACGGCGACGGCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGcc < 8:191235/147‑1 (MQ=255) cccAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAg > 2:314777/1‑148 (MQ=255) cccAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGc < 6:188075/149‑1 (MQ=255) cgccgtGGCG‑CTGGTTACCGGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCa > 1:124133/6‑149 (MQ=255) ccgtGGCG‑CTGGTTACCGGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATc > 8:377562/4‑149 (MQ=255) ccgtGGCG‑CTGGTTACCGGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATc < 2:124133/146‑1 (MQ=255) aGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATc < 6:344282/149‑1 (MQ=255) gcg‑cCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATcgccgc < 2:332042/149‑1 (MQ=255) cg‑cCTGTAACCAGCGCCACGTC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCACACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATCgccgcc < 8:62950/149‑1 (MQ=255) cg‑cCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAg < 4:40259/125‑1 (MQ=255) cg‑cCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAg > 3:40259/1‑125 (MQ=255) g‑cCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTgcg > 6:350591/1‑134 (MQ=255) g‑cCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTgcg < 5:350591/134‑1 (MQ=255) | CACAGGCCTTGGCCGCACTATCACGATTACTGATCGCCTGGCCCAGCGCAATAATGCCGAAGTACAGGAACAGCAGGATGAGCATGGACGTAAGGCGGGCATCCCACACCCACCAGCTGCCCCAGGTCGGCTTGCCCCAGATGGCG‑CCGGTAACCAGCGCCACGGC‑GGTCATCCAGGCGCCAATGGGCGCGGCACACTGCAGGGCGACGTCGGCCAGTTTCATCTTCCACACCAGCCCCACCACCCCGGCCACCGCCAGCAGCACATAGCAGGACTGCGCCAGCATCGCCGCC > NC_002947/4915601‑4915893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |