| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,015,794 | C→T | 5.3% | intergenic (‑57/+177) | PP_5679 ← / ← PP_4421 | hypothetical protein/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,015,794 | 0 | C | T | 5.3% | 275.9 / 2.5 | 93 | intergenic (‑57/+177) | PP_5679/PP_4421 | hypothetical protein/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (44/43); new base T (2/3); total (46/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAAGAGGGTA > NC_002947/5015651‑5015938 | gCAGAGTGACTTCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑gg < 8:114797/148‑1 (MQ=255)gCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCGCCGGAGACCGGTGC‑gg < 5:418837/148‑1 (MQ=255)gCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑gg < 2:365515/148‑1 (MQ=255) cAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGc > 3:177715/1‑149 (MQ=255) tGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTa < 3:176933/149‑1 (MQ=255) tGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTa < 6:420786/149‑1 (MQ=255) tGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTa < 3:412749/149‑1 (MQ=255) tGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTa < 2:114172/149‑1 (MQ=255) ctgGGCACGAAGCTTCTCGGCAGCCCTGGACGTATACGTAGCCACTGCTTCTTTGATCGGAGCCAGCGCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATACAGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTc < 1:290188/149‑1 (MQ=255) tgGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCg > 4:30538/1‑149 (MQ=255) tgGGCACGAAGCTTCTCGGCAGCACTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATACTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCg > 2:15634/1‑149 (MQ=255) gCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑gg < 1:185615/132‑1 (MQ=255) gCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑gg > 2:185615/1‑132 (MQ=255) gAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTg > 4:395801/1‑149 (MQ=255) gAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTg > 4:367583/1‑149 (MQ=255) gAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTg < 5:124193/149‑1 (MQ=255) aaGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTg > 1:126745/1‑148 (MQ=255) gCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGAc < 5:128997/149‑1 (MQ=255) cTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGGTTTTACTTTCCGGGCC‑TTGGACa < 8:228021/149‑1 (MQ=255) tctcGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAg > 3:412903/1‑148 (MQ=255) tcGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTAt > 1:305634/1‑149 (MQ=255) ggCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTAt < 3:30538/147‑1 (MQ=255) gCAGCCCTGGACGTATAGGTAGCCACTGCATCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCAGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCt > 7:291091/1‑148 (MQ=255) cAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGa < 6:419242/149‑1 (MQ=255) cAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGa > 6:198027/1‑149 (MQ=255) aGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGAc > 4:213657/1‑149 (MQ=255) tcccTGGACGTATAGGTAGCCACTTCTTCTTTTATCGGAGCCAGCTCGTTCATCCTAGCGCTCTCGTTTGAGTCCACTATTATATTAATA‑AGCCCGCACCGTTCTCCTTTGC‑TGTTTTTTATTTTCCGGGCC‑TTGGACAGTATCTGAcc < 7:65684/148‑1 (MQ=255) cccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGATCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGAccc > 3:269528/1‑149 (MQ=255) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCGCCGGAGACCGGTGC‑ggg < 5:227855/113‑1 (MQ=255) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCGCCGGAGACCGGTGC‑ggg > 6:227855/1‑113 (MQ=255) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGAccc > 6:202586/1‑148 (MQ=255) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGa > 6:383008/1‑148 (MQ=255) ggACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑gg < 8:42665/109‑1 (MQ=255) ggACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑gg > 7:42665/1‑109 (MQ=255) gACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGaaa < 3:367583/148‑1 (MQ=255) gTATAGGTAGCCACTGCTTCTTTGATCTGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTAc > 5:62026/1‑149 (MQ=255) gTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTAc < 2:308658/149‑1 (MQ=255) ataGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCAGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGt > 6:313092/1‑149 (MQ=255) taGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTc > 1:321283/1‑149 (MQ=255) gTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCAGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGAAAGTATCTGACCCGAAAGTACGTCCtt > 7:375634/1‑149 (MQ=255) gCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTtgt < 5:202586/148‑1 (MQ=255) gCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGACTCCGGCGCAGAGCTTTTAATTTCCGGGCA‑TTGGAAAGTATCTGACCCGAAAGTACGTCATtgt > 1:358502/1‑149 (MQ=255) cACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGaaa < 6:20256/134‑1 (MQ=255) cACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGaaa > 5:20256/1‑134 (MQ=255) cttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTAc < 2:378655/130‑1 (MQ=255) cttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTAc > 1:378655/1‑130 (MQ=255) tGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGc > 5:122669/1‑149 (MQ=255) aGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTgg < 2:126745/149‑1 (MQ=255) ccAGCTCGGACATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCt > 5:218683/1‑149 (MQ=255) cAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCtt < 5:198027/149‑1 (MQ=255) cAGATCGGTCATCCTAGCTCTCTCGTTTGATTCCACGATGAGATGAATA‑ATCCCTCAACGGTCTCCTGCGC‑GGGCTTTTAGTTTCCTTGCG‑TTTGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCtt < 4:177715/149‑1 (MQ=255) aGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTg > 8:164887/1‑144 (MQ=255) aGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTg < 7:164887/144‑1 (MQ=255) cTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGa > 6:191383/1‑149 (MQ=255) cTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGa < 2:417518/149‑1 (MQ=255) cTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCATTGTGAACTGATGACAGCGTCTTGGCTTTGa < 3:144039/149‑1 (MQ=255) cTCGGTCATCCTAGCGCGCTCGTTTGAGTCCACGATGAGAGGAATA‑AGCCCGCACCGCGCTCGGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACACCGTCTTGGCTTTGa < 8:306157/149‑1 (MQ=255) cTCGGTCATCCTAGCGATCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGa < 3:293094/149‑1 (MQ=255) tCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGAt > 2:30497/1‑149 (MQ=255) gTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGAtt > 5:147030/1‑147 (MQ=255) gTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGAtt < 6:147030/147‑1 (MQ=255) gTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATtgt < 6:122669/149‑1 (MQ=255) cTAGCGCTCTCTTTTGAGTCCACGATGATATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAg < 5:340370/148‑1 (MQ=255) cTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTTGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAg < 1:15634/148‑1 (MQ=255) tAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCGGCACAGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTTCGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCa < 8:291091/149‑1 (MQ=255) tAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCa > 1:54203/1‑149 (MQ=255) gcgcTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GAtgg > 6:340370/1‑143 (MQ=255) gcTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTa > 7:332400/1‑148 (MQ=255) tctcGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑a > 5:206409/1‑148 (MQ=255) tttGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑aaaaaaa < 6:218683/149‑1 (MQ=255) ttGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑aaaaaaa > 8:77572/1‑148 (MQ=255) gTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑aaaaaaaaaaa < 1:30497/148‑1 (MQ=255) tCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGc > 4:370312/1‑149 (MQ=255) tCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGc > 3:107225/1‑149 (MQ=255) gatgagatgaATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑‑AAAAAAAAAAGCCCGcc > 3:15891/1‑148 (MQ=255) agatgaATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTaa < 7:77572/148‑1 (MQ=255) tA‑AGCCCGCACGGGTCTCGGGCGG‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTTACCCGAATGTACGTTGTTGTTTACTGATGACAGCGTCTTGGCTTTGATTGT‑GATTGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGc < 2:321283/149‑1 (MQ=255) gCCCGCGCCGGAGCCCGGTGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGGGGGAtt > 1:182733/1‑148 (MQ=255) gCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCTGGCCGTTGGACAGAATATGACCCGAAAGTACGACCTTGTGAACTCATGACACCGTCTTGGCTTTAATTGT‑GATAGCACTAA‑AAAAAAAAAAAGCCCGCCTAAAgggggggt > 1:72546/1‑146 (MQ=255) gCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCtt > 6:128203/1‑148 (MQ=255) gCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCtt > 1:123763/1‑148 (MQ=255) cccGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGACCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCCCCTAAAGGCGGGCTTa > 1:398822/1‑148 (MQ=255) ccGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTACAAAAAAAAAAAACCCCGCCGAAAGGGGGGGttt > 5:350764/1‑147 (MQ=255) ccGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaa > 4:100712/1‑148 (MQ=255) ccGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaa > 2:260242/1‑148 (MQ=255) ccGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑‑AAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaaaa < 4:15891/149‑1 (MQ=255) ccGCAACGGTCTCCGGCGC‑GGGCTTTTAATTTCCGGGCC‑TTGGACAGTATCTTACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTaaa < 7:355443/137‑1 (MQ=255) cGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaaaa < 7:9682/149‑1 (MQ=255) ccGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGaa < 8:332400/149‑1 (MQ=255) cGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAag < 5:128203/149‑1 (MQ=255) gTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAagag < 2:305634/149‑1 (MQ=255) tctcCGGGGG‑GGGTTTTTACTTTCCGGGCC‑TTGGACATTATGTGACCCGAAATTTCGTTCTTTTTAACTTATGACAGCGTCTTGGCTTTTTTTGT‑TATATCAATAA‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAAGAgg < 2:54203/149‑1 (MQ=255) ctcCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTCTATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAAGAgg < 1:114536/149‑1 (MQ=255) cgtcgc‑gGGGTTTTACTTTCCGGGTG‑TTGTACTGTATGTGACCCTATAGTATGTAGTTGTTAAGTGATTTCTGCTTGTTTGCTTTTATTTT‑TAAATCACTAA‑AAAAAAAAAAAGCCCTCGTAAAGGCGGGCTTAAAACGATGAGGGTa < 6:166544/145‑1 (MQ=255) | GCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATA‑AGCCCGCACCGGTCTCCGGCGC‑GGGCTTTTACTTTCCGGGCC‑TTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGT‑GATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACGAAGAGGGTA > NC_002947/5015651‑5015938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |