| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,028,931 | T→C | 5.1% | intergenic (+8/‑431) | PP_4432 → / → PP_4433 | Xaa‑Pro aminopeptidase/amino acid MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,028,931 | 0 | T | C | 5.1% | 350.3 / 5.3 | 117 | intergenic (+8/‑431) | PP_4432/PP_4433 | Xaa‑Pro aminopeptidase/amino acid MFS transporter |
| Reads supporting (aligned to +/- strand): ref base T (58/52); new base C (3/3); total (62/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
AAACCTGGTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCCAGGGAG > NC_002947/5028783‑5029078 | aaaCCTGGTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGt > 3:339150/1‑149 (MQ=255) aCCTGGTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGttt > 8:14768/1‑149 (MQ=255) aCCTGGTATGACCTTCCACTTCATGCCTGGCCGATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACTAAAAGttt > 1:54711/1‑149 (MQ=255) cTGGTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGc < 4:339150/149‑1 (MQ=255) gTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTTGC‑AA‑ACTTTTCGTCAG‑TCCTTGACGAAAAGCTTGCGAg < 6:271063/149‑1 (MQ=38) gTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAg < 2:277467/149‑1 (MQ=255) tGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑ACTTTTCGTCAG‑TCCTTGACGAAAAGCTTGCGAgga < 1:97408/148‑3 (MQ=38) gACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGc > 8:210724/1‑149 (MQ=255) aCCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGc < 3:49153/148‑1 (MQ=255) ccTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGGGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTg > 4:228735/1‑149 (MQ=255) cTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACATTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTg > 4:281505/1‑148 (MQ=255) tCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAg > 2:329050/1‑149 (MQ=255) tCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAg > 1:51461/1‑149 (MQ=255) tCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGAATCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGGTTGCAAGTCGCTGGAg > 3:319614/1‑149 (MQ=255) ccACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAg < 6:186246/148‑1 (MQ=255) ccTTCATGCCTGGCCTATCGATCGATCATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTCACGAAAAGTTTGCAAGTAGCTGGAGTta > 6:201170/2‑149 (MQ=255) aCTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTta > 6:355258/1‑149 (MQ=255) tCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGCGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAg > 7:335278/1‑149 (MQ=255) ccTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGGGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCa < 3:228735/149‑1 (MQ=255) tGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGt > 1:410351/1‑143 (MQ=255) tGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGt < 2:410351/143‑1 (MQ=255) tATGGATGGATGATTGGGGGCTCGAGATTACCAGAGAGCATCATGATCAATGATAATGGGGTCGAGACGTTCTGCTCGACTCATCGC‑AA‑GCTTTTCGTAAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTa > 1:53999/1‑149 (MQ=255) tggatggaTGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGCAAA‑ACTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATc < 1:126016/149‑1 (MQ=255) tggatggaTGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATc < 5:253943/148‑1 (MQ=255) tggatggaTGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCt > 2:18423/1‑149 (MQ=255) atggatgATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCa < 3:237973/149‑1 (MQ=255) tggatgATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACATTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCa < 3:281505/148‑1 (MQ=255) gatgatTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGc > 5:406396/1‑148 (MQ=255) atgatTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGa < 2:51461/149‑1 (MQ=255) ttGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAAt < 7:210724/149‑1 (MQ=255) ggggCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAAtgt > 8:267401/1‑148 (MQ=255) ggCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGAt < 8:156554/149‑1 (MQ=255) tCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCg > 2:402463/1‑104 (MQ=255) tCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCg < 1:402463/104‑1 (MQ=255) tCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATg > 5:226741/1‑147 (MQ=255) tCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGt > 7:299321/1‑149 (MQ=255) gagaTTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGt < 5:355258/147‑1 (MQ=255) gagaTTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTg < 7:267401/148‑1 (MQ=255) gagaTTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTg < 8:288015/148‑1 (MQ=255) aTTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCt > 2:73510/1‑148 (MQ=255) c‑GAGATCATCCTTATCATTGATACTGGGTGAGAGACGTTCTGATCGAGTCCTCGC‑AA‑GCTTTTCGTCAA‑TGACTGACGAAAAGTTTGCAAGTCGATGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGc < 4:319614/149‑1 (MQ=255) agagCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCAc > 5:424898/1‑149 (MQ=255) agagCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGACTATCTTCAGCGACAATGTGa > 4:391888/1‑133 (MQ=255) cATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AAGGCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCAACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑At > 1:326795/1‑149 (MQ=255) tCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCAc > 1:380090/1‑149 (MQ=255) tCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCAc > 2:121743/1‑149 (MQ=255) tCCTGATCACTGATACTGGCGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCAc < 8:335278/149‑1 (MQ=255) ccTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGTTGCCTTAAAGCACC‑ATCACt > 2:360876/1‑149 (MQ=255) cTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCTTTAAGGCACC‑ATCAca < 1:192947/148‑2 (MQ=255) tGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTc > 4:363278/1‑148 (MQ=255) tCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGc < 2:380090/149‑1 (MQ=255) aCTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑a < 8:288941/137‑1 (MQ=255) aCTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑a > 3:160974/1‑137 (MQ=255) aCTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑a < 4:160974/137‑1 (MQ=255) aCTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑a > 7:288941/1‑137 (MQ=255) cTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTACAGCCAc > 1:152387/1‑149 (MQ=255) tGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACt > 4:44250/1‑149 (MQ=255) tACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAAGGGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTcc > 1:320678/1‑149 (MQ=255) tGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTg > 5:150888/1‑149 (MQ=255) gggTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGtt > 2:426607/1‑149 (MQ=255) gagaCGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTAc > 8:273442/1‑148 (MQ=255) ttCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACaaaaaaa < 1:426607/149‑1 (MQ=255) cTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAg > 8:113126/1‑148 (MQ=255) cTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCa < 7:14768/147‑1 (MQ=255) gACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCTTTAAGGCACC‑ATCAc > 8:181895/1‑112 (MQ=255) gACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCTTTAAGGCACC‑ATCAc < 7:181895/112‑1 (MQ=255) gcgacttgC‑AA‑ACTTTTCGTCAG‑TCCTTGACGAAAAGCTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGc > 5:396523/8‑149 (MQ=37) aCTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGc > 4:205680/1‑149 (MQ=255) tcctcGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCt > 6:149109/1‑149 (MQ=255) tcctcGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCt > 7:237548/1‑149 (MQ=255) cGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTg > 2:395674/1‑147 (MQ=255) gC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGa < 2:30223/147‑1 (MQ=255) gC‑AA‑GCTTTTAGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTTGAGTTATAGTGCCACGGCTATCTTCAGCTACAATGTGATGGTGACTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGACTTGaa < 1:360876/148‑1 (MQ=255) gC‑AA‑GATTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATTGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGaa < 5:201170/148‑1 (MQ=255) gC‑AA‑ACTTTTCGTCAG‑TCCTTGACGAAAAGCTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACCTAAAAGTACAGCCCCTCCTTTGTTTTACAAAAAAAGCACGAGGCCTTg > 1:146397/1‑147 (MQ=25) aa‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAagag < 7:273442/149‑1 (MQ=255) aa‑GCTTTTCGTAAA‑GGACTGACGAAAAGTTTGCAAGTCGCTTGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTTATGGAGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCATCCTTGaa < 2:54711/146‑1 (MQ=255) a‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAgg < 2:152387/149‑1 (MQ=255) ttCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTg < 2:53999/147‑1 (MQ=255) cGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGaaa < 3:363278/148‑1 (MQ=255) cGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGaaa < 1:73510/148‑1 (MQ=255) tCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTGTAGTGCCACGGATATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACA‑ATCACTCCAGCAACTCATTTGTTTTACAAAAAAATCACGAAGCCTTGAAGAGGTTGAAAGta > 3:242867/1‑148 (MQ=255) tCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGtt > 1:178973/1‑149 (MQ=255) acAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACCAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGtt > 2:392722/2‑149 (MQ=255) aa‑GGACTGACTAAAAGTTTGAAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGa < 8:163670/149‑1 (MQ=255) aa‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGa < 2:178973/149‑1 (MQ=255) tccttGACGAAAAGCTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGAtt < 6:396523/145‑1 (MQ=255) gACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGtt > 2:312806/1‑105 (MQ=255) gACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGtt < 1:312806/105‑1 (MQ=255) gACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTg > 2:94688/1‑149 (MQ=255) tGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGaaa > 5:368536/1‑138 (MQ=255) tGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGaaa < 6:368536/138‑1 (MQ=255) aCGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTccc > 5:15237/1‑149 (MQ=255) gAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTccc > 1:30880/1‑147 (MQ=255) aaaaGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCCAg > 3:377467/1‑149 (MQ=255) aaaaGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGAACA‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTTAAGAGCTTGAAAGTTGATTGTTCCCCAg > 5:339748/1‑149 (MQ=255) aaaGTTTGCAAGTCGTTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCAAgg > 8:225313/1‑149 (MQ=255) aaaGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCCAgg < 1:307486/149‑1 (MQ=255) aaGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCCAggg < 5:91045/149‑1 (MQ=255) gTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCCAGGGAg > 1:405795/1‑149 (MQ=255) | AAACCTGGTATGACCTTCCACTTCATGCCTGGCCTATGGATGGATGATTGGGGGCTCGAGATTACC‑GAGAGCATCCTGATCACTGATACTGGGGTCGAGACGTTCTGCTCGACTCCTCGC‑AA‑GCTTTTCGTCAA‑GGACTGACGAAAAGTTTGCAAGTCGCTGGAGTTATAGTGCCACGGCTATCTTCAGCGACAATGTGATGGTGCCTTAAAGCACC‑ATCACTCCAGCCACTCCTTTGTTTTACAAAAAAAGCACGCAGCCTTGAAGAGGTTGAAAGTTGATTGTTCCCCAGGGAG > NC_002947/5028783‑5029078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |