| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,074,828 | C→T | 9.2% | A28A (GCC→GCT) | PP_4468 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,074,828 | 0 | C | T | 9.2% | 210.9 / 9.0 | 77 | A28A (GCC→GCT) | PP_4468 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (35/34); new base T (5/2); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.48e-01 | |||||||||||
ATACCTCATTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCACCCCCTACCCAT > NC_002947/5074680‑5074976 | ataCCTCATTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGcc < 1:391397/149‑1 (MQ=255) taCCTCATTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCa < 8:293469/149‑1 (MQ=255) aCCTCATTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAg > 8:186477/1‑149 (MQ=255) ccTCATTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTATTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGc > 1:109018/1‑149 (MQ=255) aTTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTc < 6:316155/148‑1 (MQ=255) aTTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTc < 1:357871/148‑1 (MQ=255) gAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAAt < 7:367108/148‑1 (MQ=255) tgtTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTaa < 5:200257/149‑1 (MQ=255) tgtTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTaa < 7:195388/149‑1 (MQ=255) tttATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAg < 5:258623/148‑1 (MQ=255) aTCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCTGGCGTCagaaag < 4:255668/142‑6 (MQ=255) aTCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCTGGCGTCagaaag > 3:255668/1‑137 (MQ=255) ccGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAAt < 1:256937/138‑1 (MQ=255) ccGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAAt > 2:256937/1‑138 (MQ=255) gAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCTGGCGTCaga < 6:361788/135‑3 (MQ=255) gAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCTGGCGTCaga > 5:361788/1‑133 (MQ=255) ggCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGGCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCtt < 8:13057/149‑1 (MQ=255) ttCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAAt < 6:238998/129‑1 (MQ=255) ttCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAAt > 5:238998/1‑129 (MQ=255) tgtgGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCgg < 5:394088/149‑1 (MQ=255) atatCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCt < 3:95474/119‑1 (MQ=255) atatCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCt > 4:95474/1‑119 (MQ=255) tatCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTCGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCg < 4:54557/149‑1 (MQ=255) tatCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGcc < 5:272440/148‑1 (MQ=255) tCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCgg > 2:270555/1‑148 (MQ=255) ccTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGt < 6:229816/108‑1 (MQ=255) ccTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGt > 5:229816/1‑108 (MQ=255) cTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTGCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGCACGCGGGGAGGCCGGCa < 7:186477/148‑1 (MQ=255) tGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCAt > 2:242345/1‑148 (MQ=255) ttttGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGc > 5:37653/1‑149 (MQ=255) ttttGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGc > 7:86861/1‑149 (MQ=255) cAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGaaa > 5:51140/1‑148 (MQ=255) aaaCCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGaaaaa > 8:405353/1‑149 (MQ=255) aaCCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAAt > 8:257647/1‑149 (MQ=255) cTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGGCGGCATTACGCTGGAAAAATTCGAGAGCCt > 1:262991/1‑149 (MQ=255) tGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTg > 4:394709/1‑149 (MQ=255) tGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTg > 8:139507/1‑149 (MQ=255) agaATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGc > 3:228836/1‑149 (MQ=255) aTTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCt > 8:130034/1‑147 (MQ=255) ttGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAg < 4:228836/149‑1 (MQ=255) cccTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCa > 5:407902/1‑149 (MQ=255) ccTAGCGGGCACAGTTCGAGCCCTAAGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTATGATCAGCGCCCGTGAACGCGGGGAGGCCGGCAGTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGcgg > 8:409349/1‑147 (MQ=255) tAGCGGGAACACTTAGAGCCCTACGGCTAACACGGCGCTTTCTGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACtt < 8:390350/149‑1 (MQ=255) gCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACtt < 1:242345/147‑1 (MQ=255) gggCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCg < 4:291148/104‑1 (MQ=255) gggCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCg > 3:291148/1‑104 (MQ=255) gggCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGaaa > 4:365104/1‑149 (MQ=255) gggCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGaaa > 7:31869/1‑149 (MQ=255) cacaCTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAg < 7:257647/149‑1 (MQ=255) cacTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCTGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGAc < 2:109018/149‑1 (MQ=255) cacTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGAc < 8:86861/149‑1 (MQ=255) acTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGAcc < 2:210937/149‑1 (MQ=255) acTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGAcc < 2:217562/149‑1 (MQ=255) acTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGAcc > 3:392492/1‑149 (MQ=255) ttCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCg > 6:229419/1‑149 (MQ=255) tACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTg > 1:404582/1‑149 (MQ=255) cGGCTAAACCGTCGCTTTCGGTACGATCAGCTTGCTGACGCGAGCGTCAAATCAAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGt < 3:103938/148‑1 (MQ=255) cGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGt < 7:139507/148‑1 (MQ=255) ggCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGttt < 7:130034/149‑1 (MQ=255) ggCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGttt < 7:405353/149‑1 (MQ=255) tAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAg > 1:157469/1‑58 (MQ=255) tAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAg < 2:157469/58‑1 (MQ=255) aaCCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACt < 2:27547/149‑1 (MQ=255) cGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCAt < 1:270555/149‑1 (MQ=255) tttCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTc > 6:334920/1‑149 (MQ=255) cGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCg < 8:31869/148‑1 (MQ=255) gTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCAc > 3:403692/1‑149 (MQ=255) gTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCAc < 7:264507/149‑1 (MQ=255) tACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACg > 6:126779/1‑149 (MQ=255) agcagcTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGt > 3:173056/1‑149 (MQ=255) gcagcTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTg > 3:429006/1‑149 (MQ=255) gcagcTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCCGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTg < 4:391101/149‑1 (MQ=255) ttagatttGACGCTGGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGc > 8:106958/8‑149 (MQ=255) tagatttGACGCTGGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCa > 6:349133/7‑149 (MQ=255) tttCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCAcc > 6:293699/1‑149 (MQ=255) tttCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCAcc > 7:148773/1‑149 (MQ=255) gatttGACGCTGGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCAcc > 8:172550/5‑149 (MQ=255) tGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCAccccc > 2:390671/1‑148 (MQ=255) cAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCACCCCCTACCCAt > 5:99656/1‑149 (MQ=255) | ATACCTCATTTGAGTGTTTATCCGAAAGGCTTCTGTGTGGCTATATCCTGACTTTTGGCCAAACCATGCAGCTGAGAATTGCCCTAGCGGGCACACTTCGAGCCCTACGGCTAAACCGTCGCTTTCGGTACGAGCAGCTTTCTGACGCCAGCGTCAAATCTAAGATCAGCGCCCTTGAACGCGGGGAGGCCGGCATTACGCTGGAAAAATTCGAGAGCCTGGCTGAGGCACTTGAAATAGACCCGTTGGCCTTGTTTGCACTGTGCATGTCCGCACGGCGTGGCACCCCCTACCCAT > NC_002947/5074680‑5074976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |