| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,208,055 | G→T | 5.5% | A218A (GCC→GCA) | PP_4589 ← | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,208,055 | 0 | G | T | 5.5% | 325.8 / 5.7 | 100 | A218A (GCC→GCA) | PP_4589 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base G (48/46); new base T (2/4); total (50/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
AGCCCCAGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCT > NC_002947/5207907‑5208203 | aGCCCCAGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAg > 4:316121/1‑149 (MQ=255) gCCCCAGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAgg < 4:419405/149‑1 (MQ=255) ccccAGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGc < 5:285683/149‑1 (MQ=255) cAGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCCTT‑GTTCATCAATGCCgg < 1:83578/149‑2 (MQ=255) aGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCAGAGCACCGGAC‑AGATGACCCTCTTTGAACGCCTCGACCATGTCGGCATCGTCCAGCGCCACTCCACGCCCGGGATT‑GATGAACAAGGCCGAg < 1:39372/149‑1 (MQ=255) aGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCCTT‑GTTCATCAATGCCggg < 5:441419/149‑3 (MQ=255) aGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAg < 7:30268/149‑1 (MQ=255) ggTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCt > 1:179536/1‑149 (MQ=255) ggTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCt < 5:140024/149‑1 (MQ=255) ggTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTg < 2:418832/149‑1 (MQ=255) gtgtTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGc > 5:26536/1‑143 (MQ=255) gtgtTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGc < 6:26536/143‑1 (MQ=255) gtgtTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGa < 8:389473/149‑1 (MQ=255) gCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAgc > 5:213417/1‑149 (MQ=255) gggCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCAttt > 4:55201/1‑138 (MQ=255) gggCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCAttt < 3:55201/138‑1 (MQ=255) ggCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCgcgg < 3:362509/148‑1 (MQ=255) aaCGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGt > 1:344945/1‑148 (MQ=255) tCCTGGCGGCACACATCGATCACAGCACCGGCCTAGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATa > 1:279106/1‑147 (MQ=255) tCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATa < 8:47751/146‑1 (MQ=255) tCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATa > 7:47751/1‑146 (MQ=255) tCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAg > 5:390176/1‑149 (MQ=255) tCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAg > 6:296540/1‑149 (MQ=255) cTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAgg > 3:295965/1‑148 (MQ=255) tGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGt > 8:116413/1‑148 (MQ=255) ggcACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGa < 4:89824/149‑1 (MQ=255) ggcACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGa < 3:317042/149‑1 (MQ=255) cacacaTCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGt > 1:399914/1‑149 (MQ=255) acacaTCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAATGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTc > 3:427155/1‑149 (MQ=255) acacaTCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCAttt < 6:210670/118‑1 (MQ=255) acacaTCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCAttt > 5:210670/1‑118 (MQ=255) tCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCgg < 5:296540/149‑1 (MQ=255) gcGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGTCCAGGTCGGCATCGACCAGCGCCACCCCACGCCCGGCATT‑GTTGAACAAGGCGGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCgg < 7:102878/148‑1 (MQ=255) gATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCgggg > 1:210107/1‑149 (MQ=255) aTCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCgggg > 2:365146/1‑148 (MQ=255) gCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCgg < 2:179536/149‑1 (MQ=255) aCCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgca < 6:199956/149‑1 (MQ=255) aCCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGGCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgca < 6:344223/149‑1 (MQ=255) ccGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgcag < 7:21235/149‑1 (MQ=255) cGGCC‑AGATGACCCTCTTTCAACTCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑TATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgcagc < 6:369120/149‑1 (MQ=255) cGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgcagc < 2:279106/149‑1 (MQ=255) c‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGa < 7:236775/124‑1 (MQ=255) c‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGa > 8:236775/1‑124 (MQ=255) aGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGtt > 1:166642/1‑149 (MQ=255) gATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTc < 6:143007/149‑1 (MQ=255) aCCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGc < 1:365146/148‑1 (MQ=255) aCCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGc < 2:166642/148‑1 (MQ=255) cccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGACCAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCAc < 8:348888/149‑1 (MQ=255) cccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGcagcag > 4:87228/1‑140 (MQ=255) cccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGcagcag < 3:87228/140‑1 (MQ=255) cccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCAc > 6:232299/1‑149 (MQ=255) cccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCAc > 2:114185/1‑149 (MQ=255) ccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAg < 4:167741/117‑1 (MQ=255) ccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAg > 3:167741/1‑117 (MQ=255) ccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAgg > 7:103628/1‑140 (MQ=255) ccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAgg < 8:103628/140‑1 (MQ=255) ccTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGAAAT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACg > 1:294854/1‑149 (MQ=255) ctctTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgcagca < 6:51195/137‑1 (MQ=255) ctctTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGgcagca > 5:51195/1‑137 (MQ=255) aaCGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGAc > 6:377468/1‑149 (MQ=255) aaCGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGAc < 1:114185/149‑1 (MQ=255) aaCGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGAc < 5:377468/149‑1 (MQ=255) aaCGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGAc > 6:108589/1‑149 (MQ=255) cGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCt < 3:316121/149‑1 (MQ=255) ccAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAgg > 5:368921/1‑122 (MQ=255) ccAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAgg < 6:368921/122‑1 (MQ=255) gTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGccaa > 8:317670/1‑143 (MQ=255) gTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGccaa < 7:317670/143‑1 (MQ=255) gTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAgc > 8:36324/1‑149 (MQ=255) tCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCTGCACGTAGTCGACCTGGCCAACCAAgcg > 7:200690/1‑149 (MQ=255) cGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAgcgc > 2:211099/1‑149 (MQ=255) gCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCgg < 7:116413/149‑1 (MQ=255) cATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCgg > 4:12976/1‑148 (MQ=255) cATCGAACACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCACGCGCgg > 3:268483/1‑148 (MQ=255) aTCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCa < 4:208518/149‑1 (MQ=255) accaccGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTc > 5:266140/1‑149 (MQ=255) accaccGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAACCGCGGCAGTTc > 7:148177/1‑149 (MQ=255) accaccGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCACGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTc > 7:89633/1‑149 (MQ=255) ccaccGGCACACCACGCCCGGCATT‑TATTAACAATGCCGAGGGCTGGAATCATTTGAACAGCGCTGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGGCGTCCTGGCCAACCAAGCGCGGCAGGTCg < 4:268483/149‑1 (MQ=255) ccaccGCCACACCACGCCCGGCATTGGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAgcg > 1:225802/1‑140 (MQ=255) ccaccGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAgcg < 2:225802/139‑1 (MQ=255) caccGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCgg > 1:36601/1‑149 (MQ=255) ccGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGcc < 1:211099/149‑1 (MQ=255) tccacGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGcgccg > 2:129255/2‑149 (MQ=255) accacGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGcgccg < 7:230785/149‑1 (MQ=255) accacGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGcgccg < 2:344945/149‑1 (MQ=255) ccacGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGcgccgc > 3:175212/1‑149 (MQ=255) acGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCa > 8:388959/1‑149 (MQ=255) cGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCAc < 6:213417/149‑1 (MQ=255) ctcGGCCTT‑GTTCATCAATGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCt > 7:336995/3‑149 (MQ=255) cccGGCATT‑GATGAACAATGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCt < 4:427155/149‑1 (MQ=255) ccGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTc < 2:18587/149‑1 (MQ=255) ccGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGACGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTc > 1:102403/1‑149 (MQ=255) atgaACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTcga < 5:186705/142‑1 (MQ=255) atgaACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTcga > 6:186705/1‑142 (MQ=255) tgaACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACgg < 4:295965/148‑1 (MQ=255) gaACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGgcg > 7:12551/1‑149 (MQ=255) gaACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGgcg > 8:127900/1‑149 (MQ=255) ggCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGc > 3:322660/1‑148 (MQ=255) ggCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCt > 6:154788/1‑149 (MQ=255) | AGCCCCAGGCGGTCCAGAACGGGTGTTGCTTGGGCAACGGCTCCTGGCGGCACACATCGATCACAGCACCGGCC‑AGATGACCCTCTTTCAACGCCTCGACCAGGTCGGCATCGACCACCGCCACACCACGCCCGGCATT‑GATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCT > NC_002947/5207907‑5208203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |