| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,226,651 | T→A | 5.1% | intergenic (+13/+17) | PP_4605 → / ← PP_4606 | AraC family transcriptional regulator/ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,226,651 | 0 | T | A | 5.1% | 305.3 / 4.1 | 97 | intergenic (+13/+17) | PP_4605/PP_4606 | AraC family transcriptional regulator/ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base T (42/50); new base A (3/2); total (45/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.17e-01 | |||||||||||
GTTGCGGCTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGT > NC_002947/5226503‑5226798 | gttgCGGCTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGct > 5:128866/1‑149 (MQ=255)gttgCGGCTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGct > 1:237056/1‑149 (MQ=255) cTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGc < 7:401639/149‑1 (MQ=255) ggAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGcc < 5:428932/147‑1 (MQ=255) gAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACATGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCAGAGCGGccccg > 1:168789/1‑148 (MQ=255) aGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTGTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCAGAGCGGccccgg < 4:129068/149‑3 (MQ=255) aaTGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACTTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCAttt < 6:363582/148‑1 (MQ=255) aTGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTg < 6:165473/148‑1 (MQ=255) aTGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGc < 7:305017/149‑1 (MQ=255) cGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTa > 6:101732/1‑148 (MQ=255) ggAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAAc < 2:237056/147‑1 (MQ=255) ggAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTc > 5:19984/1‑149 (MQ=255) ggAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTc > 5:442042/1‑149 (MQ=255) ggAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTc > 3:48096/1‑149 (MQ=255) ggAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCAGTTCCGCAACCGGTTTCGCCAAGCCCTGGGGGCCCCCCCTGGCGAAGAGCGCCAGGCGTTTTTCGTCTGACGCCGGGGCCGCTGGGCGGCCGGATTTGGCTAAAACTc > 6:379378/1‑149 (MQ=255) agagaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCg > 5:66/1‑148 (MQ=255) agagaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGa < 1:378847/149‑1 (MQ=255) agagaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGa < 8:39150/149‑1 (MQ=255) gagaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGaa < 5:379378/149‑1 (MQ=255) agaTTTCCTTATTGTGCGGGTTTGACAGTGCCAGCCATTTCATCAACCGGTTTCGCCAAGCACTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAg < 4:265284/149‑1 (MQ=255) agaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGaa < 6:290472/148‑1 (MQ=255) tGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGc > 7:82209/1‑149 (MQ=255) tgCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAAc < 2:412089/148‑1 (MQ=255) tgCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCCGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAAc < 6:212909/148‑1 (MQ=255) gCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACt > 2:159520/1‑148 (MQ=255) gCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACt > 3:302714/1‑148 (MQ=255) gggTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGAc > 1:153755/1‑149 (MQ=255) gggTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGAc > 4:84934/1‑149 (MQ=255) gggTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGAc < 1:158986/149‑1 (MQ=255) gggTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGAc < 6:66372/149‑1 (MQ=255) gTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCt < 4:7290/149‑1 (MQ=255) gTTTGCCAGTGCCAGCCATTTCAGCAAACGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACAGGGGCCGCTCTTCGGCCCCAATTGCCTAAAAATCGAAGGTGCAGCACAAACTTACCt > 4:4240/1‑149 (MQ=255) tttGCCAGTGGCAGCCATTTCAGCAACGTGTTTCGCCAAGCCGTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCGTAAAACTCGAAGGTGCTCGACAAACTGACCTg < 4:302714/149‑1 (MQ=255) tttGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCGGCGGCCCCATTTGCCTAAAACTCGAAGTTGGTCGACAAACTGACCTg > 3:280780/1‑149 (MQ=255) gccagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGcc < 5:18586/148‑1 (MQ=255) cagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCcgcg > 7:294798/1‑149 (MQ=255) ccagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACaaa < 5:376349/131‑1 (MQ=255) ccagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACaaa > 6:376349/1‑131 (MQ=255) ccagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcg > 3:407366/1‑149 (MQ=255) agccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgc > 7:292970/1‑148 (MQ=255) tttCAGCAACCGGTTTCGCCACGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcg > 5:114385/1‑149 (MQ=255) ttCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc > 4:414463/1‑149 (MQ=255) cAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGAGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCAGCCGCGcatcgcccatcgcc > 4:60892/1‑148 (MQ=255) aGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgcca > 1:205941/1‑148 (MQ=255) gCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCGCCATTTGCCTAAAACTCGAAGGTGCTCGACAACCTGACCTGCCGCGCATCGCCAATCGCcac > 3:127535/1‑148 (MQ=255) cAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAACCCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCcaca > 7:239918/1‑148 (MQ=255) cAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCcaca > 7:258521/1‑148 (MQ=255) ggTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTAc < 5:282831/149‑1 (MQ=255) gTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACt > 3:121215/1‑149 (MQ=255) tCGCCAAGCCCTGGGGGCCACACCTGGCTAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTgg < 3:235028/148‑1 (MQ=255) tCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTgg < 5:101732/148‑1 (MQ=255) cAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAc > 5:260650/1‑149 (MQ=255) cccTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAccgcc > 8:15479/1‑149 (MQ=255) ggggCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCt > 6:388123/1‑149 (MQ=255) ggggCCACACCTCGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAg < 6:128866/147‑1 (MQ=255) gggCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTg < 5:398295/149‑1 (MQ=255) ggCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGt < 6:442042/149‑1 (MQ=255) ggCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGt < 4:48096/149‑1 (MQ=255) ccACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTaa > 8:271376/1‑149 (MQ=255) ccACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTaa > 1:222653/1‑149 (MQ=255) ccACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTaa < 6:114385/149‑1 (MQ=255) ccTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATacac < 8:258521/149‑1 (MQ=255) cTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACAcc < 8:292970/149‑1 (MQ=255) cTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACAcc > 7:233460/1‑149 (MQ=255) gCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTg > 1:257292/1‑149 (MQ=255) tACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGaa < 3:84934/149‑1 (MQ=255) ccGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGaa > 8:128408/1‑147 (MQ=255) ccGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAAc < 8:294798/148‑1 (MQ=255) cGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGt > 7:377986/1‑130 (MQ=255) cGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGt < 8:377986/130‑1 (MQ=255) cAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGt < 2:257292/149‑1 (MQ=255) aaGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAccgcc < 4:316964/120‑1 (MQ=255) gcTTTATCATCTGAAACCGGCGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 4:18726/148‑1 (MQ=255) ccTTTTTCATCTGAAACCGGGGCCGCTCTGCTGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 2:60302/149‑1 (MQ=255) ccTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 8:233460/149‑1 (MQ=255) ccTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 2:153755/149‑1 (MQ=255) cTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCa > 4:181189/1‑149 (MQ=255) tttttCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTaa > 2:385008/1‑123 (MQ=255) tttttCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTaa < 1:385008/123‑1 (MQ=255) tttCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCAc < 4:407366/147‑1 (MQ=255) ttCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCGAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGt < 3:60892/148‑1 (MQ=255) ttCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGt > 8:214156/1‑148 (MQ=255) tCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGtt < 6:260650/148‑1 (MQ=255) aTCTGAAACCGTGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAg < 1:189910/149‑1 (MQ=255) aTCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCa < 8:82209/148‑1 (MQ=255) aTCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAg < 4:121215/149‑1 (MQ=255) aaaCCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTg < 4:280780/147‑1 (MQ=255) aaaCCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTg < 3:414463/147‑1 (MQ=255) aaaCCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTg < 5:388123/147‑1 (MQ=255) aaaCCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTg > 3:422238/1‑147 (MQ=255) aaatggggCCGCAGAGCGGCCCCGTTTGCCTAAAACTCGAAGGTGCTCGACAACCTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAg > 1:300409/5‑149 (MQ=255) aaatggggCCGCAGAGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACg < 4:132061/134‑1 (MQ=255) aaatggggCCGCAGAGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACg > 3:132061/5‑138 (MQ=255) aCCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAgg < 7:128408/149‑1 (MQ=255) ggggCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTGGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAACGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGgcgc > 3:87489/1‑149 (MQ=255) gggCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCa > 2:255189/1‑149 (MQ=255) gCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc < 8:164643/73‑1 (MQ=255) gCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc > 7:164643/1‑73 (MQ=255) gCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTtg > 1:244278/1‑149 (MQ=255) ctctGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGCTTCTTCACGTTCAGTTGCAGGCGCACGTtgt < 6:19984/149‑1 (MQ=255) | GTTGCGGCTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGT > NC_002947/5226503‑5226798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |