| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 416,121 | G→C | 5.9% | D297H (GAC→CAC) | waaC → | ADP‑heptose‑‑LPS heptosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 416,121 | 0 | G | C | 5.9% | 319.2 / 6.7 | 98 | D297H (GAC→CAC) | waaC | ADP‑heptose‑‑LPS heptosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (46/46); new base C (2/4); total (48/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.21e-01 | |||||||||||
GCGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGT > NC_002947/415977‑416265 | gcggcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGGCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTg < 5:23691/149‑1 (MQ=255) ggcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGc < 2:363289/149‑1 (MQ=255) gcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGcc < 3:292449/149‑1 (MQ=255) gcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGcc > 5:8995/1‑149 (MQ=255) gcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGcc > 6:193767/1‑149 (MQ=255) ggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCtt < 2:48008/149‑1 (MQ=255) ggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCtt > 5:212247/1‑149 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTg < 1:285312/149‑1 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtgg < 6:201893/149‑3 (MQ=255) cAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgc > 1:391953/1‑149 (MQ=255) cAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgc > 3:57597/1‑149 (MQ=255) cAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt < 5:193767/149‑4 (MQ=255) cAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt < 6:361563/149‑4 (MQ=255) aaGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgcgc > 5:221899/1‑149 (MQ=255) gCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTcc < 6:164690/149‑1 (MQ=255) gCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTcc < 4:333381/149‑1 (MQ=255) cTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcct > 4:116144/1‑149 (MQ=255) cGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcc > 5:419386/1‑149 (MQ=255) cGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgc < 6:212247/148‑1 (MQ=255) gCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCctgcctgc < 6:434076/148‑1 (MQ=255) cGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTTGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcctg > 1:176193/1‑146 (MQ=255) cGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcctg > 4:119520/1‑146 (MQ=255) gTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCagaa < 4:57597/149‑1 (MQ=255) tCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCagaag < 5:400080/149‑1 (MQ=255) gATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCagaag > 2:413687/1‑147 (MQ=255) aTACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGaagaag < 2:408295/149‑1 (MQ=255) aTACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGaagaag < 3:281141/149‑1 (MQ=255) aCCGGCCTTGGCCACCTGGCGGCGGCACGTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGt > 1:247733/1‑149 (MQ=255) aCCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGt < 6:8995/148‑1 (MQ=255) aCCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTg > 3:197192/1‑149 (MQ=255) cGGCCTTGGCCACCTGGTGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGt > 5:35132/1‑146 (MQ=255) cGGCCTTGGCCACCTGGTGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGt < 6:35132/146‑1 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCa < 2:335034/149‑1 (MQ=255) ggCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAc > 4:26444/1‑149 (MQ=255) ggCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGCAGTGCACCTACa > 4:261228/1‑148 (MQ=255) gCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACaaa > 7:35209/1‑149 (MQ=255) gCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCACCCTGCCTGCAGAAGAAGTGCACCTACaaa < 1:35419/149‑1 (MQ=255) gcTGGCGGCGGCAC‑TCGATGTGCGCACCCTTTAGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGAGCCAGATTCACGAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACTAACCGa < 2:354535/148‑1 (MQ=255) cTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAg > 6:263302/1‑149 (MQ=255) gcggcggcAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAgc < 1:335916/147‑1 (MQ=255) cgtcAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCTAt < 2:314230/146‑1 (MQ=255) gcAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGa < 3:26444/149‑1 (MQ=255) aC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGAcc > 3:259214/1‑149 (MQ=255) c‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCt > 1:2905/1‑149 (MQ=255) c‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCt < 2:391953/149‑1 (MQ=255) aTGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGcc < 6:419386/149‑1 (MQ=255) cccACCCTTTCGCTGTTTGGCCCTCCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAATGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGt < 3:247987/148‑1 (MQ=255) cccACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGtt > 1:383198/1‑149 (MQ=255) aCCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGa > 4:190202/1‑149 (MQ=255) cccTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGAt < 1:413687/149‑1 (MQ=255) tttCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCACCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCgcact > 6:274796/1‑144 (MQ=255) ttCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTg > 3:423980/1‑148 (MQ=255) tCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCAATCTGa < 1:300129/148‑1 (MQ=255) tttGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAAcgc > 3:68114/1‑147 (MQ=255) tttGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAAcgc > 1:262713/1‑147 (MQ=255) tttGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAAcgc > 1:24958/1‑147 (MQ=255) gCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTgg > 6:177998/1‑149 (MQ=255) ccTACCAACCCGGGCCTGACTGGCGCGTACGGGGGGACGCGGATTCACCAGGCCAGTGAGGGGCGTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGCGCGCCGATGGGCTGGCGCGGTGCGATCTGAAGCGCGAGt > 8:87529/1‑145 (MQ=255) ccTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGt < 7:87529/145‑1 (MQ=255) ccTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGcc > 6:259615/1‑149 (MQ=255) tACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGc > 5:126941/1‑149 (MQ=255) tACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGc > 7:311530/1‑149 (MQ=255) aCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCt > 5:59142/1‑149 (MQ=255) ccAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtg < 3:211870/149‑1 (MQ=255) cAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGCTCTGAAACGCGAGTGGCCGCtgt > 7:125211/1‑149 (MQ=255) cAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtgt < 2:247733/149‑1 (MQ=255) cAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtgt < 3:116144/149‑1 (MQ=255) aCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc < 2:176193/149‑1 (MQ=255) cTGACTGGCGCCTACGGCCGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCGCTGCCTGCAGAAGAAGTGCGCCTACAAACCGAGCGCCGATGCCCTGGCCCGGTTCGCTCTGACACGCGAGTGGCCGCTGTGCTTCACtag > 8:78611/1‑147 (MQ=255) aCTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCg < 8:42488/94‑1 (MQ=255) aCTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCg > 7:42488/1‑94 (MQ=255) aCTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGc < 4:197192/147‑1 (MQ=255) aCTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGc < 2:262713/147‑1 (MQ=255) aCTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCt < 3:190202/149‑1 (MQ=255) gcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATcc > 8:358146/1‑149 (MQ=255) gcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATcc > 8:160313/1‑149 (MQ=255) gcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTACACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATcc > 4:38534/1‑149 (MQ=255) ccTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATccc < 2:238726/149‑1 (MQ=255) cTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTg < 3:20061/66‑1 (MQ=255) cTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTg > 4:20061/1‑66 (MQ=255) acggacggACCCAGATTCGCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGc > 7:129672/1‑123 (MQ=255) acggacggACCCAGATTCGCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGc < 8:129672/123‑1 (MQ=255) cggacggaCCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAg < 4:259214/148‑1 (MQ=255) cggacggaCCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAg < 6:221899/148‑1 (MQ=255) cggacggaCCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGc < 3:119520/149‑1 (MQ=255) ggacggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCa < 7:358146/149‑1 (MQ=255) aaggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCAtg > 7:278629/3‑149 (MQ=255) ccAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGa < 6:260669/138‑1 (MQ=255) ccAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGa > 5:260669/1‑138 (MQ=255) ccAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCAGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGc > 6:19184/1‑147 (MQ=255) cAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAg < 6:59142/149‑1 (MQ=255) gATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGcc > 3:228507/1‑149 (MQ=255) aCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCtt < 2:2905/148‑1 (MQ=255) aCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGGTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCCAGCCGCtt > 6:46303/1‑148 (MQ=255) aaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAg > 7:216058/2‑140 (MQ=255) aaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAg < 8:216058/139‑1 (MQ=255) ccAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGcgcg < 4:68114/149‑1 (MQ=255) cAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGCGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGt > 5:11938/1‑149 (MQ=255) | GCGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCAC‑TCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGT > NC_002947/415977‑416265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |