| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,257,874 | A→G | 6.1% | intergenic (‑73/+71) | PP_4634 ← / ← PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,257,874 | 0 | A | G | 6.1% | 234.3 / 4.4 | 83 | intergenic (‑73/+71) | PP_4634/PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
| Reads supporting (aligned to +/- strand): ref base A (40/37); new base G (2/3); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
AGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCG > NC_002947/5257726‑5258020 | agcagAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGaa > 5:173182/1‑149 (MQ=255) gAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCg > 2:343389/1‑149 (MQ=255) aGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCt < 6:272343/149‑1 (MQ=255) gccgccGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGATAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTc > 8:206062/1‑149 (MQ=255) cgccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTc‑‑cc < 8:115045/149‑2 (MQ=255) gccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑t > 2:191609/1‑148 (MQ=255) ccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TAc < 2:238525/149‑1 (MQ=255) cgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTc‑‑cca > 3:348415/1‑145 (MQ=255) aGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAgg < 2:314870/149‑1 (MQ=255) gCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAgggg < 5:22485/149‑1 (MQ=255) gCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAgggg < 3:200699/149‑1 (MQ=255) cTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGATAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAggggg < 7:206062/149‑1 (MQ=255) tGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑Ta > 1:239693/1‑141 (MQ=255) tGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑Ta < 2:239693/141‑1 (MQ=255) tATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGgag > 4:148543/1‑148 (MQ=255) tATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGga < 7:259373/147‑1 (MQ=255) tCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAAc < 4:406477/149‑1 (MQ=255) ccGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGACTCTTCGCGGGTGAACCCGCTC‑‑C‑‑AACAGGGGGAGAAcc > 8:51487/1‑149 (MQ=255) cGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑t > 5:83150/1‑149 (MQ=255) cGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCAACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑t > 1:306526/1‑149 (MQ=255) gCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTgg > 2:153618/1‑148 (MQ=255) gcgGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGc < 8:399010/149‑1 (MQ=255) ggggTGGCGAAATGGGCTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGGGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCgg < 1:287036/149‑1 (MQ=255) gggTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCgg < 1:374940/148‑1 (MQ=255) gTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCt < 6:306163/149‑1 (MQ=255) gCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCCAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTga > 1:126410/1‑148 (MQ=255) gCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTg < 4:154131/148‑1 (MQ=255) gCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGc > 6:229003/1‑149 (MQ=255) aaaTGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCcg > 2:224413/1‑149 (MQ=255) aaTGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCtt > 5:26867/1‑143 (MQ=255) aaTGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCtt < 6:26867/143‑1 (MQ=255) gTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAGCTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAagag > 6:326808/1‑149 (MQ=255) tAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTC‑‑C‑‑CACAGGTTCTCCCCC‑‑TGTAGGAGCGGGTTCACCCGCGAagag < 3:303817/148‑1 (MQ=14) tAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTC‑‑C‑‑CACAGGTTCTCCCCC‑‑TGTAGGAGCGGGTTCACCCGCGAagag > 4:303817/1‑148 (MQ=14) gCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAg > 6:273805/1‑127 (MQ=255) gCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAg < 5:273805/127‑1 (MQ=255) gggTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTC‑‑C‑‑CACAGGTTCTCCCCC‑‑TGTAGGAGCGGGTTCACCCGCGAAGAGGccag < 4:348415/149‑3 (MQ=14) aTGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCTCCAAAACTAGCAAAGATTTTGTAGCGTGTACTGGCCTGTGCGCGGGTGAACCCGCTC‑‑C‑‑TACTGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGc < 4:407597/149‑1 (MQ=39) aCTCAAGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAGGAGGCCGGTACAGGCTTACCCGa < 3:95461/149‑1 (MQ=255) cTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTATCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTC‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAccc < 1:343239/148‑1 (MQ=255) tCAAGGCCCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGCCCTCATCGCGGGTGAACCCCCTC‑‑C‑‑TACACGGGGAGAACC‑‑TGTGGGAGCGCGCTTGCCCGCGAAGAGGCAGGTACAGGCTTACCCGAt > 6:322057/1‑148 (MQ=255) aTGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTa > 1:203313/1‑148 (MQ=255) cgcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCt > 5:375399/1‑149 (MQ=255) cgcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCt < 5:229003/149‑1 (MQ=255) gcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTc > 4:87436/1‑149 (MQ=255) gTCCTGTTGTTGTGCGCCAAAAGTCGCAAAGATTTTGTAGCCTTTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGAc < 7:51487/148‑1 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGt > 8:183983/1‑149 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑A‑‑TACAGGGGGAGAACC‑‑TGTGTGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACACGATTACAGCTCGACGCAg > 7:279139/1‑148 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTAATGGCCTCTTACCGGGTGCAACCCCGC‑‑C‑‑TACAGGGGGAGAAAA‑‑TGTGGGATCGGCCATGCCACACAAGAGCCCGGAACATGCATACCCGATTACATCTATACGCAGt > 8:215018/1‑149 (MQ=255) ttgttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTc < 6:375399/148‑1 (MQ=255) ttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGaa < 3:253494/148‑1 (MQ=255) gtgCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACg < 5:211068/138‑1 (MQ=255) gtgCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACg > 6:211068/1‑138 (MQ=255) tgCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACtt > 2:144340/1‑148 (MQ=255) gcgcCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑CGGTACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACtt > 1:125529/1‑149 (MQ=255) cgcCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTca < 7:183983/148‑1 (MQ=255) gcCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTcac > 6:99141/1‑148 (MQ=255) ccAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCCGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACAt > 4:363119/1‑149 (MQ=255) aaaaCTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑AACAGGGGGAGCACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGGACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCg > 7:141517/1‑149 (MQ=255) ccttgCAATGATTTTGTAGCCTTTACTGGCCGATTCGCGGGTGAACCCGCTC‑‑C‑‑TACCGGGGGATAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCTATTACATCTCGACGCAGTCGAACTTCACATCGGTg < 7:215018/145‑1 (MQ=38) tAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGc > 7:397636/1‑149 (MQ=255) cAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCAc < 1:224413/149‑1 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACCTGTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCa > 1:126038/1‑149 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACg > 7:159754/1‑149 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACg > 1:415501/1‑149 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACCCAGTCGAACATCACATCGGTGGCCAcc > 4:224884/1‑148 (MQ=255) aaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGCACTTCACATCGGTGGCCACGt > 1:205446/1‑149 (MQ=255) gATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCt < 5:312260/149‑1 (MQ=255) gATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCt < 3:148543/149‑1 (MQ=255) aTTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCtt > 3:337220/1‑149 (MQ=255) ttttGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCttt < 1:191609/149‑1 (MQ=255) ttttGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCttt > 4:138215/1‑149 (MQ=255) gTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTc < 6:83150/148‑1 (MQ=255) gCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTa < 3:138215/148‑1 (MQ=255) gCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAg > 4:270990/1‑149 (MQ=255) gCCTCTACTGTCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCAGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTa < 8:279139/148‑1 (MQ=255) tACTGGCCTCTTCGGGGGTGATCCCGGTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCTGGAAGAGGCCGGTAGAGGCTTACCCGATTAGAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCaa < 5:322057/148‑1 (MQ=255) tACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAAc < 1:153618/149‑1 (MQ=255) cTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACg < 3:87436/148‑1 (MQ=255) ctctTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAgcg > 1:227049/1‑149 (MQ=255) tctTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAgcgc > 6:311440/1‑149 (MQ=255) ttCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAgcgcgc > 3:186527/1‑149 (MQ=255) cgcgGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAgcgcgc < 7:32180/147‑1 (MQ=255) tGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGcc < 2:227049/149‑1 (MQ=255) aaCCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCg > 6:27991/1‑148 (MQ=255) | AGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC‑‑C‑‑TACAGGGGGAGAACC‑‑TGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCG > NC_002947/5257726‑5258020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |