| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,261,067 | A→G | 5.9% | D178D (GAT→GAC) ‡ | PP_4637 ← | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,261,067 | 0 | A | G | 5.9% | 247.0 / 4.1 | 84 | D178D (GAT→GAC) ‡ | PP_4637 | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein |
| Reads supporting (aligned to +/- strand): ref base A (40/39); new base G (2/3); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
GTGCAGCAGCCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGA > NC_002947/5260920‑5261215 | gTGCAGCAGCCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCAt > 7:6653/1‑149 (MQ=255) tGCAGCAGCCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGTGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATc < 3:200344/149‑1 (MQ=255) cgaagcCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAAc < 4:102607/146‑1 (MQ=255) agcagcCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAAc > 3:312195/1‑149 (MQ=255) gcagcCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCGCCAAcc > 2:433324/1‑149 (MQ=255) agcCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGATCCAGATCGACGTGCAGGCCATCAACCgg > 4:320770/1‑149 (MQ=255) gcCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGc > 5:428171/1‑149 (MQ=255) cAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCGCCAACCTGCCGGt > 5:333085/1‑149 (MQ=255) ggTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGG‑CCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTggc < 4:417188/149‑1 (MQ=255) tCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTggcg < 2:371785/149‑1 (MQ=255) ttGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCGCCAACCTGCCGGTTgatggc < 6:333085/149‑6 (MQ=255) gCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCGCCAACCTGCCGGTTgatggc < 1:433324/147‑6 (MQ=255) gCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTggcgg < 4:312195/146‑1 (MQ=255) cccAAATCACCAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCGCCAACCTGCCGGTTGATGGcct < 8:83056/148‑2 (MQ=255) cccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCa < 1:415744/148‑1 (MQ=255) ccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGTCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAgg > 2:313632/1‑149 (MQ=255) ccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAgg > 7:120314/1‑149 (MQ=255) ccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAgg > 2:292422/1‑149 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCAGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAgg > 1:347621/1‑149 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGt > 2:355239/1‑149 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGt > 3:25366/1‑149 (MQ=255) aaGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTg < 2:176579/149‑1 (MQ=255) aggcgaggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑c < 7:19370/149‑1 (MQ=255) aggcgaggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑c < 8:39404/149‑1 (MQ=255) aggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTcc < 2:376772/149‑1 (MQ=255) aggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTc > 5:381793/1‑148 (MQ=255) ggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCCATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCa < 1:355239/149‑1 (MQ=255) gcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAg < 8:19894/149‑1 (MQ=255) ttGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGc > 1:185674/1‑148 (MQ=255) gACCGTCGACCAGTCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCAcc > 1:430561/1‑148 (MQ=255) cGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt < 4:98398/130‑1 (MQ=255) cGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt > 3:98398/1‑130 (MQ=255) gACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTACCAGGCCACCGAAGTACg > 4:100905/1‑149 (MQ=255) aCCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGt > 2:101840/1‑149 (MQ=255) ccAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTg > 8:93812/1‑149 (MQ=255) cAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTgg > 6:216416/1‑149 (MQ=255) gCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGa < 6:381793/149‑1 (MQ=255) cccAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTgg > 6:246934/1‑145 (MQ=255) cccAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTgg < 5:246934/145‑1 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATT‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGAt > 1:415906/1‑148 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGAt > 3:424885/1‑148 (MQ=255) cAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCCGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCa < 8:105409/149‑1 (MQ=255) gCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGc > 6:122302/1‑149 (MQ=255) gCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGc < 6:105546/149‑1 (MQ=255) cGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGct > 1:104713/1‑149 (MQ=255) aGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGGCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttctt < 1:313632/149‑1 (MQ=255) aGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttctt < 8:5334/149‑1 (MQ=255) aGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttctt < 2:347621/149‑1 (MQ=255) aGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttct > 2:240514/1‑148 (MQ=255) ttGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCATGAACCAGATCGACGTGCAGGCCATCAACCGGCAGCTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACCTGGCGATCAGCTTCTTCAACgg > 8:333352/1‑149 (MQ=255) tGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGt > 3:76450/1‑149 (MQ=255) tGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGt > 3:424846/1‑149 (MQ=255) gTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGt < 3:258787/148‑1 (MQ=255) gTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGt < 4:76450/148‑1 (MQ=255) aGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGAGCAGCTTCTTCAAGGGTgcg > 3:319005/1‑149 (MQ=255) ggCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTgcg < 1:101840/149‑1 (MQ=255) cGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGtt > 7:256201/1‑149 (MQ=255) ggCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTg < 1:292422/149‑1 (MQ=255) aGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAg < 7:93812/149‑1 (MQ=255) cGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAt < 5:247284/149‑1 (MQ=255) cGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAt < 2:49487/149‑1 (MQ=255) gATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAAGCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAtg > 1:290204/1‑149 (MQ=255) gATA‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAtg > 5:210364/1‑149 (MQ=255) agaATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTa < 5:122302/149‑1 (MQ=255) gTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGGGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGAcgc < 4:95262/148‑1 (MQ=255) cTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAgg > 1:255803/1‑149 (MQ=255) cTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGTGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGAGGCGTTCATAGGCGt < 2:90185/149‑1 (MQ=255) cTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGc < 2:281801/147‑1 (MQ=255) cTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGc < 2:430561/147‑1 (MQ=255) cTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGt > 4:148073/1‑149 (MQ=255) gggCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGtttt > 6:347402/1‑149 (MQ=255) gcgcCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTc < 2:347999/149‑1 (MQ=255) gcatGATCCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCAGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTAGTAGACGCGTACATAGGCGTTTTTCCa > 6:152922/4‑149 (MQ=255) cTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGt > 1:199408/1‑149 (MQ=255) cTGAACCAGATCGACGTGCAGGCCATCAAACGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCATTCATAGGCGTTTTTCCAGt > 1:32232/1‑149 (MQ=255) aaCCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTcc < 4:424885/148‑1 (MQ=255) ccAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTgg > 7:146843/1‑149 (MQ=255) ccAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTgg < 8:120314/149‑1 (MQ=255) ccAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCATTCATAGGCGTTTTTCCAGTCCTgg < 2:32232/149‑1 (MQ=255) cGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTgcgc < 6:228453/96‑1 (MQ=255) cGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTgcgc > 5:228453/1‑96 (MQ=255) cAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTggg > 5:442138/1‑149 (MQ=255) ggCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCg < 2:270353/149‑1 (MQ=255) ccATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAg < 2:415906/149‑1 (MQ=255) aTCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTCCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGa > 6:96669/1‑149 (MQ=255) | GTGCAGCAGCCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATC‑GAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTG‑CCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGA > NC_002947/5260920‑5261215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |