| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,263,969 | A→T | 5.2% | L93Q (CTG→CAG) | zinU ← | P‑loop guanosine triphosphatase‑dependent zinc chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,263,969 | 0 | A | T | 5.2% | 291.8 / 4.2 | 95 | L93Q (CTG→CAG) | zinU | P‑loop guanosine triphosphatase‑dependent zinc chaperone |
| Reads supporting (aligned to +/- strand): ref base A (42/48); new base T (2/3); total (44/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
ATGGTCTGGGTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTGGCTGTC > NC_002947/5263822‑5264114 | aTGGTCTGGGTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAg > 5:353593/1‑149 (MQ=255)aTGGTCTGGGTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAg > 3:17404/1‑149 (MQ=255) gTCTGGGTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTCAGAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGc > 1:336798/1‑149 (MQ=255) tCTGGGTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCGCCTGGTGa > 8:221023/1‑149 (MQ=255) ggTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCGCCTGGTGATCGa < 7:221023/149‑1 (MQ=255) ggTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCg > 4:153822/1‑148 (MQ=255) ggTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCg < 3:288551/148‑1 (MQ=255) tCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAg > 4:180033/1‑149 (MQ=255) tCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAg > 5:68513/1‑149 (MQ=255) cAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAgg < 6:353593/149‑1 (MQ=255) aGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCGCCTGGTGATCGaatg < 5:211138/148‑3 (MQ=255) aGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAgg < 2:304262/148‑1 (MQ=255) ggTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGc > 7:171462/1‑148 (MQ=255) ggTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCg < 8:231573/149‑1 (MQ=255) gTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGa > 8:56521/1‑149 (MQ=255) gTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGa < 1:402017/149‑1 (MQ=255) ttCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTccc > 3:86774/1‑149 (MQ=255) ttCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTccc > 5:198549/1‑149 (MQ=255) cGGCATGCGCGGGATCTACTAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTGGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCGAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTcccc < 4:268458/148‑1 (MQ=255) cGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCg < 8:171462/149‑1 (MQ=255) ggCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCg < 6:153381/148‑1 (MQ=255) aTGCGCGGCATCGCCAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCAt > 4:328584/1‑149 (MQ=255) tGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATc > 3:222085/1‑149 (MQ=255) gcgcGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATc > 4:396771/1‑148 (MQ=255) cATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGt > 1:251961/1‑149 (MQ=255) aTCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGtt < 7:81277/149‑1 (MQ=255) aTCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGtt < 4:86774/149‑1 (MQ=255) gACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTc > 7:149065/1‑147 (MQ=255) aCAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAag > 1:396711/1‑149 (MQ=255) aGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAagcag < 3:153822/149‑1 (MQ=255) gggTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAagcagc < 2:396711/149‑1 (MQ=255) ggTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAg < 6:35870/135‑1 (MQ=255) ggTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAg > 5:35870/1‑135 (MQ=255) ggTGATGATGCCGGC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAgcagca < 8:197591/149‑1 (MQ=255) atgatgCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTa > 7:37613/1‑149 (MQ=255) atgatgCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTa < 3:271872/149‑1 (MQ=255) tgatgCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTAc < 4:17404/149‑1 (MQ=255) atgCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACa < 3:396771/148‑1 (MQ=255) tgCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAg < 3:300859/148‑1 (MQ=255) cGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAgcgcg > 5:215576/1‑149 (MQ=255) gAGGATGTAGCGCTCCCGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAg > 5:120950/1‑149 (MQ=255) gATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCa < 4:122759/149‑1 (MQ=255) tAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTc > 6:266188/1‑149 (MQ=255) gcTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCa > 1:134858/1‑149 (MQ=255) gcTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCAGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCa > 5:7627/1‑149 (MQ=255) cTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCAt < 3:103851/149‑1 (MQ=255) tCACGCAGCTCTTCGTCGATGAAGAACGTTTGTGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATg > 1:362006/1‑149 (MQ=255) aCGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGa > 1:312258/1‑149 (MQ=255) aCGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGCCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCCATTTCCCCGGCATCCAGGCGTTCAACCAGCAGGAACAGCGAGCGAGTCAGGTCGcaaagg > 8:395630/1‑143 (MQ=255) cGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGAt < 4:126827/149‑1 (MQ=255) gCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGAtg > 2:133605/1‑149 (MQ=255) cAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGAtgc < 2:312258/149‑1 (MQ=255) cgtcgATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCTGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTgcagc < 4:222085/147‑1 (MQ=255) cgtcgATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTgcagca < 2:251961/148‑1 (MQ=255) gtcgATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATa < 8:149065/149‑1 (MQ=255) gtcgATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATa < 6:441360/149‑1 (MQ=255) gtcgATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCACGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATa < 5:374825/149‑1 (MQ=255) gATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCAGCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATaca > 8:22916/1‑148 (MQ=255) gaagaaCGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAAc > 3:221000/1‑149 (MQ=255) agaaCGTTTGCGCGACCGGCGCCGGGTCCGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCAAGGCGTTCAAGCAGAAGGTACATCGCGCGAGTCACGTCGCCATGGATGCTGCAGCATACAAAAACg > 4:123567/1‑149 (MQ=255) gaaCGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGt > 5:21407/1‑149 (MQ=255) aaCGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGTAGCATACACAACCGtt < 5:83480/149‑1 (MQ=255) aCGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTg < 6:215576/149‑1 (MQ=255) aCGTTTGCGCGACCCGCGCCGGGGCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTGCAAGCAGCAGGTACAGCGCGCGAGGCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTg < 8:190218/149‑1 (MQ=255) cgcgACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACTCAACCGTTGGCCAAgg > 1:302228/1‑149 (MQ=255) cgcgACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAgg < 7:56521/149‑1 (MQ=255) cgcgACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAg < 1:133605/148‑1 (MQ=255) gACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAgcgc < 6:34850/96‑1 (MQ=255) gACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAgcgc > 5:34850/1‑96 (MQ=255) aCCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCAt < 3:231129/149‑1 (MQ=255) ggCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGa < 4:29603/112‑1 (MQ=255) ggCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGa > 3:29603/1‑112 (MQ=255) gcgcCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGAcc < 2:362006/149‑1 (MQ=255) cgcCGGGGCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCt < 2:200344/149‑1 (MQ=255) gcCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCCGGCGTTCAAGCAGCAGGTACAGCGCGCGCGTCAGGTCGCCATGGATGCTGCAGCCTACACAGCCGTTGGCCAAGGTGCTGACCTg > 6:293459/1‑149 (MQ=255) gcCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGCCCTg > 2:328079/1‑149 (MQ=255) gggTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCAc < 2:336798/149‑1 (MQ=255) ggTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCAcc < 6:21407/149‑1 (MQ=255) ggCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGTTTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCt < 3:328584/149‑1 (MQ=255) ggCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCt > 5:5749/1‑149 (MQ=255) ggCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCt < 6:68513/149‑1 (MQ=255) cGGTGCATTCGTTCACCAGGCGATCGATGGCGATTTCCCCGGGATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTccccc < 7:395630/149‑1 (MQ=255) cGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTccccc < 3:180033/149‑1 (MQ=255) ccttCGATCGCCTGGTGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCcag < 5:57728/144‑1 (MQ=255) ccttCGATCGCCTGGTGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCcag > 6:57728/3‑146 (MQ=255) ttCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGt < 4:166831/148‑1 (MQ=255) ttCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGt > 3:166831/1‑148 (MQ=255) cGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTg < 2:134858/148‑1 (MQ=255) gATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTgg < 6:7627/148‑1 (MQ=255) gATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTGGc > 5:13850/1‑149 (MQ=255) aTCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTGGCt > 4:6786/1‑149 (MQ=255) tCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTGGCTg < 5:266188/149‑1 (MQ=255) ccAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTGGCTGTc > 1:255336/1‑148 (MQ=255) cAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGtt > 7:247439/1‑140 (MQ=255) cAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGtt < 8:247439/140‑1 (MQ=255) | ATGGTCTGGGTCAGGTGCAGTTCGGCATGCGCGGCATCGACAAGGGTGATGATGCCGTC‑GAGGATGTAGCGCTCACGCAGCTCTTCGTCGATGAAGAACGTTTGCGCGACCGGCGCCGGGTCGGCCAGGCCGGTGCATTCGATCACCAGGCGATCGAAGGCGATTTCCCCGGCATCCAGGCGTTCAAGCAGCAGGTACAGCGCGCGAGTCAGGTCGCCATGGATGCTGCAGCATACACAACCGTTGGCCAAGGTCATGACCTGCACCGGCTGTTCCCCCAGCAGTTGGCTGTC > NC_002947/5263822‑5264114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |