| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,276,837 | A→G | 9.3% | intergenic (‑141/‑203) | cioA ← / → PP_4652 | cyanide insensitive ubiquinol oxidase subunit I/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,276,837 | 0 | A | G | 9.3% | 204.1 / 9.6 | 75 | intergenic (‑141/‑203) | cioA/PP_4652 | cyanide insensitive ubiquinol oxidase subunit I/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (35/33); new base G (3/4); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
CGAACATGGTGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGTT > NC_002947/5276690‑5276984 | cGAACATGGTGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGaa < 1:14734/149‑1 (MQ=255) gAACATGGTGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAAc > 8:70675/1‑149 (MQ=255) gAACATGGTGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAAc > 4:60192/1‑149 (MQ=255) gTGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGa < 1:225498/148‑1 (MQ=255) tGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGAcc < 5:260056/149‑1 (MQ=255) gCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACAGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGAcc > 6:387636/1‑148 (MQ=255) cTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGAcc > 3:415733/1‑147 (MQ=255) ttCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaat > 3:111537/1‑149 (MQ=255) ttCAGATAATCCGGCGTCCAGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTACGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaat > 7:361775/1‑149 (MQ=255) cAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaat < 5:145684/147‑1 (MQ=255) cAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaatg < 6:124982/148‑1 (MQ=255) aGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaatgaa < 5:85155/149‑1 (MQ=255) aTAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaatgaatg > 2:45231/1‑149 (MQ=255) aaTCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCt < 5:294661/149‑1 (MQ=255) aTCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTa < 5:181909/149‑1 (MQ=255) cGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAgg > 6:25629/1‑148 (MQ=255) cGTCCGGGCTCGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGc < 1:10334/149‑1 (MQ=255) cGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAg > 6:69022/1‑149 (MQ=255) ttGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaat < 4:318265/126‑1 (MQ=38) ttGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaat > 3:318265/1‑126 (MQ=38) ggCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑Tg > 7:22702/1‑149 (MQ=255) gCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaa < 6:120482/120‑1 (MQ=38) gCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaa > 5:120482/1‑120 (MQ=38) gCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑Tgg > 2:249595/1‑149 (MQ=255) cccAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGcc > 1:117781/1‑149 (MQ=255) gTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGcccacc < 6:223350/149‑4 (MQ=255) gTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGt < 1:45231/149‑1 (MQ=255) ccACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGcc < 1:134339/149‑1 (MQ=255) cTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCgtg > 4:136743/1‑149 (MQ=255) cccccACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCgtgt < 8:22702/147‑1 (MQ=255) cccccACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTgtgg < 4:311665/149‑1 (MQ=255) ccccACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTgtggt < 1:249595/149‑1 (MQ=255) cccACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTgtggtg > 8:408188/1‑149 (MQ=255) ccACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTgtggtg > 5:207269/1‑148 (MQ=255) cACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGa < 2:98688/149‑1 (MQ=255) cTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGAtt < 8:47526/149‑1 (MQ=255) ggTCGAGTACGGCGTGTTGTAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTg < 3:104916/147‑1 (MQ=255) ggTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGcc > 3:172235/1‑149 (MQ=255) tCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCcgc > 8:47512/1‑149 (MQ=255) tCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCcgc < 3:136743/149‑1 (MQ=255) gTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGa > 5:371647/1‑149 (MQ=255) cGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCt < 6:199049/149‑1 (MQ=255) cGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCt > 1:2999/1‑149 (MQ=255) gCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGt > 1:426913/1‑149 (MQ=255) gtTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGcc > 3:123027/1‑149 (MQ=255) ggAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTc < 8:183667/148‑1 (MQ=255) ggAATTGGTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTc < 3:106614/148‑1 (MQ=255) gAATTGTTCTGTTCGATCGCAGGGATTCCGTCCAGACGGCCAATTCATTGATGTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCa < 5:387636/148‑1 (MQ=255) aaTTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCAcc < 4:111537/149‑1 (MQ=255) aTTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGAACAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGTATTGCAGCGTGCCCTGTTGCATCAccc > 8:112726/1‑149 (MQ=255) ttGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCct > 5:111617/1‑149 (MQ=255) gttctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCctct > 6:274824/1‑149 (MQ=255) gttctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCAAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGCGGATTGCCGCGTGACCTGTTGCCTCACCctc < 8:361775/148‑1 (MQ=255) ttctgttcGATCGCAGGGATTCCGGCCAGACGTCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCctct < 6:414620/148‑1 (MQ=255) ttctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCtt > 4:152878/1‑149 (MQ=255) ttctgttcGATCGCAGGGATTCCGGCCACACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGAGGTGGATTGCCGCGTGACCTGTTGCCACACGCTCtt > 6:337324/1‑149 (MQ=255) tctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCttt > 8:163529/1‑149 (MQ=255) ctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCttt < 7:163529/148‑1 (MQ=255) ttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAACTGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTg < 1:337021/147‑1 (MQ=255) gCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGt < 6:235026/148‑1 (MQ=255) ggCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGcc > 1:205450/1‑148 (MQ=255) ggCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGcc > 1:218477/1‑148 (MQ=255) ggCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGc < 2:117781/149‑1 (MQ=255) tagcaTTCATTGATCTGGGTCAATCGTTCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGc > 5:386850/5‑148 (MQ=38) aaTTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCaaa > 6:99330/1‑148 (MQ=255) aaTTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACACTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCaaa > 7:90968/1‑148 (MQ=255) aTTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACa < 3:60192/149‑1 (MQ=255) aTTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGCAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACACTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTaa > 4:100266/1‑149 (MQ=255) ttGATCTGGGTCAATCGTTCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAAc < 6:386850/149‑1 (MQ=255) tGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAAcc > 4:360376/1‑149 (MQ=255) gAACGATTGACCCCGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGGGGGCCGTGTGGGGGATTGCCGCGTGACCTGTTGCCTCACACTCGTTGATGAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGt > 8:341155/1‑148 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCtt < 5:25629/146‑1 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCtt < 1:57640/146‑1 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTg < 8:215959/147‑1 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTg < 2:2999/147‑1 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGta > 7:215959/1‑148 (MQ=255) | CGAACATGGTGCTTCCTCTTCAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAA‑TGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGTT > NC_002947/5276690‑5276984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |