Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,300,148 C→G 9.1% G1209R (GGC→CGC)  recB ← Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,300,1480CG 9.1% 269.1 / 14.6 88G1209R (GGC→CGC) recBChi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
Reads supporting (aligned to +/- strand):  ref base C (42/38);  new base G (3/5);  total (45/43)
Fisher's exact test for biased strand distribution p-value = 4.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01

GAGTAATTGCAGCAGGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGC  >  NC_002947/5300000‑5300296
                                                                                                                                                     |                                                                                                                                                    
gAGTAATTGCAGCAGGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGcc                                                                                                                                                      <  3:324836/149‑1 (MQ=255)
  gcacttGCAGCAGGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGGCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCAc                                                                                                                                                    <  8:347102/145‑1 (MQ=255)
         cagcagGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTTCCGTGGCGAGCACGCGCCGGTACAg                                                                                                                                             <  2:38160/149‑1 (MQ=255)
         cagcagGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAg                                                                                                                                             >  6:96977/1‑149 (MQ=255)
           gcagGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTTCCGTGGCGAGCACGCGCCGGTACAgca                                                                                                                                           <  2:29641/149‑2 (MQ=255)
            cagGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAgcg                                                                                                                                           >  4:165563/1‑148 (MQ=255)
                   gcgcTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAgg                                                                                                                                   <  8:339832/149‑1 (MQ=255)
                    cgcTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGc                                                                                                                                  <  7:83353/149‑1 (MQ=255)
                      cTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCtt                                                                                                                                <  2:220607/149‑1 (MQ=255)
                         ttgtGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATTGAGGCttt                                                                                                                               <  1:323110/147‑1 (MQ=255)
                         ttgtGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTc                                                                                                                              <  1:44894/148‑1 (MQ=255)
                            tgctgcGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGAt                                                                                                                           >  7:151719/1‑148 (MQ=255)
                              ctgcGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAg                                                                                                                        >  7:34108/1‑149 (MQ=255)
                              ctgcGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAg                                                                                                                        <  8:151719/149‑1 (MQ=255)
                              ctgcGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAg                                                                                                                        >  6:265948/1‑149 (MQ=255)
                                gcGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCt                                                                                                                      >  1:310988/1‑149 (MQ=255)
                                              agcagGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTTCCGTGGCGAGCACGCGCCGGTACAgc                                                                                                                                            <  1:50424/113‑1 (MQ=37)
                                              agcagGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTTCCGTGGCGAGCACGCGCCGGTACAgc                                                                                                                                            >  2:50424/1‑113 (MQ=37)
                                              agcagGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGCGGCTTTCGAt                                                                                                                           >  3:17212/1‑130 (MQ=255)
                                              agcagGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTg                                                                                                        <  3:165563/149‑1 (MQ=255)
                                               gcagGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTgg                                                                                                       <  7:26371/149‑1 (MQ=255)
                                                   gTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTg                                                                                                   <  5:96977/149‑1 (MQ=255)
                                                   gTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTg                                                                                                   >  1:182773/1‑149 (MQ=255)
                                                     gCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGt                                                                                                 <  3:5116/149‑1 (MQ=255)
                                                         tGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTacac                                                                                             >  2:121746/1‑149 (MQ=255)
                                                              gCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGTACCACGccaa                                                                                        <  8:388556/149‑3 (MQ=255)
                                                               cAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGTACCACGccaa                                                                                        <  3:277366/148‑3 (MQ=255)
                                                                 aCGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGc                                                                                     >  3:345674/1‑149 (MQ=255)
                                                                 aCGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGc                                                                                     <  7:296884/149‑1 (MQ=255)
                                                                     ggTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTg                                                                                                        >  6:88427/1‑126 (MQ=255)
                                                                     ggTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTg                                                                                                        <  5:88427/126‑1 (MQ=255)
                                                                        gggCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCgctgct                                                                              >  5:122503/1‑149 (MQ=255)
                                                                         ggCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCgctgctg                                                                             <  5:265948/149‑1 (MQ=255)
                                                                          gCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCgctgctgc                                                                            >  6:346635/1‑149 (MQ=255)
                                                                           cAACAGGGCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGGACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCgctgctgct                                                                           <  5:68150/149‑1 (MQ=255)
                                                                            aaCAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGctgctgctg                                                                          <  6:122503/149‑1 (MQ=255)
                                                                               aGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCGTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTgg                                                                         >  1:96888/1‑148 (MQ=255)
                                                                                ggTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCAc                                                                      <  8:37410/149‑1 (MQ=255)
                                                                                    gACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACcgcg                                                                  <  1:121746/149‑1 (MQ=255)
                                                                                       aaGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAg                                                               >  4:197810/1‑149 (MQ=255)
                                                                                          gCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGaa                                                            >  8:384558/1‑149 (MQ=255)
                                                                                            ttCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAgg                                                              >  1:226302/1‑145 (MQ=255)
                                                                                              cGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGa                                                          <  2:298292/147‑1 (MQ=255)
                                                                                              cGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGAt                                                         <  1:420154/148‑1 (MQ=255)
                                                                                                gCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAg                                                           >  5:225175/1‑144 (MQ=255)
                                                                                                gCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAg                                                           <  6:225175/144‑1 (MQ=255)
                                                                                                gCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGaa                                                      <  6:188080/149‑1 (MQ=255)
                                                                                                  tCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAgg                                                              >  2:41718/1‑139 (MQ=255)
                                                                                                  tCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGaa                                                      >  3:80323/1‑147 (MQ=255)
                                                                                                  tCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACCCCGTGGCCGCTGCTGCTGGCACCGCGCAgg                                                              <  1:41718/139‑1 (MQ=255)
                                                                                                            aCTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCgccgcc                                          <  5:11343/149‑1 (MQ=255)
                                                                                                              tCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGACGAACAGGGTGCCGCCaa                                        >  5:53516/1‑149 (MQ=255)
                                                                                                              tCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGACGAACAGGGCGCCGCCaa                                        >  3:423641/1‑149 (MQ=255)
                                                                                                                  gCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATg                                    >  2:375248/1‑149 (MQ=255)
                                                                                                                   cAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATgg                                   >  8:193263/1‑149 (MQ=255)
                                                                                                                   cAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATga                                   <  8:240291/149‑2 (MQ=255)
                                                                                                                    aaaCAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATgg                                   <  7:179533/148‑1 (MQ=255)
                                                                                                                    aaaCAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATgg                                   >  8:179533/1‑148 (MQ=255)
                                                                                                                     aaCAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCg                                 <  8:133268/149‑1 (MQ=255)
                                                                                                                            ccTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCg                                 >  6:119090/1‑142 (MQ=255)
                                                                                                                            ccTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCg                                 <  5:119090/142‑1 (MQ=255)
                                                                                                                             ctgctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAAt                         >  3:223664/1‑149 (MQ=255)
                                                                                                                              gcgctgTTCCGTGGCGAGCACGCGCCGGTACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCg                                 >  8:291676/3‑141 (MQ=38)
                                                                                                                              gcgctgTTCCGTGGCGAGCACGCGCCGGTACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCg                                 <  7:291676/139‑1 (MQ=38)
                                                                                                                               tgctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATaa                          <  5:313370/147‑1 (MQ=255)
                                                                                                                               tgctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATaa                          >  6:313370/1‑147 (MQ=255)
                                                                                                                                gctgTTCCGTGGCGAGCACGCGCCGGTACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCgccgcc                                          >  4:95679/1‑130 (MQ=38)
                                                                                                                                gctgTTCCGTGGCGAGCACGCGCCGGTACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCgccgcc                                          <  3:95679/130‑1 (MQ=38)
                                                                                                                                gctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAg                                                   >  6:390470/1‑121 (MQ=255)
                                                                                                                                gctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAg                                                   <  5:390470/121‑1 (MQ=255)
                                                                                                                                gctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCg                       >  3:333484/1‑149 (MQ=255)
                                                                                                                                 ctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCg                       <  2:182773/148‑1 (MQ=255)
                                                                                                                                 ctgTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCg                       <  8:34108/148‑1 (MQ=255)
                                                                                                                                      ccGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTcc                 >  6:28219/1‑149 (MQ=255)
                                                                                                                                      ccGGCGCGTGCTCACCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTcc                 >  2:112725/1‑149 (MQ=255)
                                                                                                                                       cGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGTACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCg                >  7:119710/1‑149 (MQ=255)
                                                                                                                                       cGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCg                >  8:31155/1‑149 (MQ=255)
                                                                                                                                       cGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCg                >  2:308471/1‑149 (MQ=255)
                                                                                                                                           gcgTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAg            >  5:405330/1‑149 (MQ=255)
                                                                                                                                             gTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGcc          >  6:201516/1‑149 (MQ=255)
                                                                                                                                              tGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcg         >  8:283071/1‑149 (MQ=255)
                                                                                                                                               gCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgc        >  8:34093/1‑149 (MQ=255)
                                                                                                                                                cTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcg       >  4:231241/1‑149 (MQ=255)
                                                                                                                                                  cGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGTCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcg     <  2:310988/149‑1 (MQ=255)
                                                                                                                                                  cGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCtgcgcg     >  5:263793/1‑149 (MQ=255)
                                                                                                                                                  cGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcg     <  4:223664/149‑1 (MQ=255)
                                                                                                                                                   gCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGTCAGCcgcgcg     <  4:345674/148‑1 (MQ=255)
                                                                                                                                                   gCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcgc    >  1:82550/1‑149 (MQ=255)
                                                                                                                                                   gCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcg     <  2:226302/148‑1 (MQ=255)
                                                                                                                                                     cACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCgcgcgcgc  <  5:201516/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GAGTAATTGCAGCAGGTCAGCGCTGTTGTGCTGCGGTGCCAGCGCCAGCAGGTGCTCTGCGTGCAACGGGGTGGGCAACAGGTCGACAAGGCTTCGGCTCATGGCGCAACTCCGGCAAACAGGTCCTGCTGTACCGGCGCGTGCTCGCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGC  >  NC_002947/5300000‑5300296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: