| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,305,668 | C→T | 5.2% | A528A (GCG→GCA) | recC ← | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,305,668 | 0 | C | T | 5.2% | 297.6 / 3.0 | 95 | A528A (GCG→GCA) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| Reads supporting (aligned to +/- strand): ref base C (50/40); new base T (3/2); total (53/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.25e-01 | |||||||||||
TCAGTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACCGCGAAGC > NC_002947/5305523‑5305813 | tCAGTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGcc < 1:335091/149‑1 (MQ=255) gTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGc > 3:190174/1‑149 (MQ=255) ccGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTgc < 4:190174/149‑1 (MQ=255) gcgTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTgcgc < 3:310554/149‑1 (MQ=255) gcgTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTgcgc < 7:123455/149‑1 (MQ=255) tCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCgcggc < 8:181284/149‑1 (MQ=255) aGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCTACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGt > 3:400217/1‑148 (MQ=255) aGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCGAGC‑CTGGGCTTGCCCGcc < 3:358107/139‑2 (MQ=255) aGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCGAGC‑CTGGGCTTGCCCGcc > 4:358107/1‑138 (MQ=255) aGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTc < 4:179070/149‑1 (MQ=255) aCCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGc < 3:23134/149‑1 (MQ=255) aCCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGc > 5:438156/1‑149 (MQ=255) aCCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGc < 7:74590/149‑1 (MQ=255) tCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAAc < 5:177403/148‑1 (MQ=255) tCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAAc < 4:368677/148‑1 (MQ=255) cGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCgcggc < 7:258457/130‑1 (MQ=255) cGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCgcggc > 8:258457/1‑130 (MQ=255) gTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGc > 6:403919/1‑149 (MQ=255) tAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGCGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGc > 6:156686/1‑148 (MQ=255) gggTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCa < 1:20761/148‑1 (MQ=255) gTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAgcg > 1:281229/1‑149 (MQ=255) aaTGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCt > 1:14007/1‑149 (MQ=255) ccATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGa < 4:154250/148‑1 (MQ=255) agttCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGa < 1:374935/145‑1 (MQ=255) aTCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATcc > 4:415333/1‑149 (MQ=255) aTCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATcc > 3:302703/1‑149 (MQ=255) gCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTg > 5:73632/1‑149 (MQ=255) gCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTg > 3:375713/1‑149 (MQ=255) ccTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGc < 5:383554/149‑1 (MQ=255) cTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTg > 4:351872/1‑147 (MQ=255) cTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCa > 4:405251/1‑149 (MQ=255) acccacccCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGa < 1:207763/134‑1 (MQ=255) acccacccCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGa > 2:207763/1‑134 (MQ=255) acccCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGAGGTGCAGCGTggg > 7:397922/1‑149 (MQ=255) cccccACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAATGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGc < 3:295009/149‑1 (MQ=255) cccccACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGc < 2:281229/149‑1 (MQ=255) ccccACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTggg > 5:136441/1‑147 (MQ=255) cccACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAg > 1:248204/1‑149 (MQ=255) cACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCTAGGCACCAACGGATGCCCGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGt > 4:188028/1‑149 (MQ=255) aCGGCATAACCCATCATCATGCGTCGCACGCCGAAACGCCAACTCTTCTCTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCCGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTc < 8:289620/149‑1 (MQ=255) ggCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCATCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGt > 7:141864/1‑149 (MQ=255) cATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGcc > 1:99816/1‑115 (MQ=255) cATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGcc < 2:99816/115‑1 (MQ=255) cATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGttt > 6:167370/1‑149 (MQ=255) cATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGttt < 8:76442/149‑1 (MQ=255) aTAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGtttt < 2:22681/149‑1 (MQ=255) cccAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTcgcg < 4:375713/149‑1 (MQ=255) ccAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTcgcg > 2:258764/1‑148 (MQ=255) cAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGa > 1:269199/1‑149 (MQ=255) cAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGc < 6:136441/149‑1 (MQ=255) cAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGc > 1:71055/1‑149 (MQ=255) aGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGcc < 3:405251/149‑1 (MQ=255) gCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCGCCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGcc > 1:114518/1‑149 (MQ=255) gcggcgCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGCCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGc > 6:7446/1‑149 (MQ=255) cggcgCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGc > 8:167455/1‑123 (MQ=255) gcAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGgcg > 2:14712/1‑149 (MQ=255) aGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAATGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGcgcg > 5:291227/1‑149 (MQ=255) aGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGcgcg < 2:269199/149‑1 (MQ=255) gCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGa > 5:366101/1‑149 (MQ=255) ccGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCTGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCgg < 3:132800/141‑1 (MQ=255) ccGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCTGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCgg > 4:132800/1‑141 (MQ=255) cGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACt < 2:71055/149‑1 (MQ=255) aaaCGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGc < 1:14712/149‑1 (MQ=255) cGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCATCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgg < 8:141864/149‑1 (MQ=255) gCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgg > 8:209997/1‑148 (MQ=255) cAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCAc > 4:222358/1‑149 (MQ=255) cAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCAc > 8:387157/1‑149 (MQ=255) aaCTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACg > 5:49821/1‑149 (MQ=255) ctgttctgttCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTc < 6:49821/149‑1 (MQ=255) ttctgttcGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag < 5:167370/149‑1 (MQ=255) ttctgttcGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag < 7:209997/149‑1 (MQ=255) tctgttcGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag > 6:342643/1‑148 (MQ=255) ctgttcGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag > 6:327120/1‑147 (MQ=255) tgttcGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcagcag > 8:80754/1‑149 (MQ=255) ttcGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAgg < 6:366101/148‑1 (MQ=255) aGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAg < 3:222358/149‑1 (MQ=255) ccGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCAc > 5:17878/1‑149 (MQ=255) ccGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCAc > 2:316428/1‑149 (MQ=255) gcggGCGAGC‑CTGGGCTTGCCCGCTGCGCGGCGTCAAGGCCCCAACGGGTGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGgcgc > 7:356976/1‑115 (MQ=255) gcggGCGAGC‑CTGGGCTTGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGgcgc < 8:356976/115‑1 (MQ=255) gcggGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTc > 6:198734/1‑149 (MQ=255) gcggGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTc > 4:294212/1‑149 (MQ=255) cggGCGAGC‑CTGGGCTTGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCg > 5:72178/1‑149 (MQ=255) cAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGa < 6:73632/149‑1 (MQ=255) cAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGa > 7:272506/1‑149 (MQ=255) cAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGa > 2:264679/1‑149 (MQ=255) cAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGAGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGa > 5:310040/1‑149 (MQ=255) cAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCAAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCCGCACGTCCACCAGGTCGAGCACTACGCtca > 8:185251/1‑147 (MQ=255) cAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGAACCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGa > 7:269899/1‑149 (MQ=255) c‑ccAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACcgc < 2:14007/149‑1 (MQ=255) c‑ccAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACcgc < 5:327120/149‑1 (MQ=255) c‑ccAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACcg > 3:355599/1‑148 (MQ=255) c‑ccAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACcg < 4:355599/148‑1 (MQ=255) gCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACCGCGAAGc < 3:415333/149‑1 (MQ=255) gCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACCGCGAAGc > 4:369159/1‑149 (MQ=255) | TCAGTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGC‑CCAGGCTCGCCCGCTGCGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACCGCGAAGC > NC_002947/5305523‑5305813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |