| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,319,751 | T→A | 5.8% | intergenic (‑378/+31) | ilvI ← / ← PP_4681 | acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,319,751 | 0 | T | A | 5.8% | 263.4 / 5.1 | 86 | intergenic (‑378/+31) | ilvI/PP_4681 | acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (39/42); new base A (2/3); total (41/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.13e-01 | |||||||||||
CTCTACAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCA > NC_002947/5319604‑5319896 | ctctACAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATc > 5:13796/1‑149 (MQ=255) cAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCgg < 4:283588/149‑1 (MQ=255) ggAAGTTGGATTCTTGTGATTCGGCGCCAACAATTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑t < 3:57157/149‑1 (MQ=255) aGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGTCGCAGATTGTGGC‑CC‑tttt < 4:304454/149‑3 (MQ=255) aGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGa < 8:55656/149‑1 (MQ=255) aGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGa < 4:365888/149‑1 (MQ=255) ggATTATTGAGATTCGCCGCCAACAAGTCAATAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAAATAAGAAGATTTCCAAAAAAAAGGGCCGCAGATTGTGGC‑CC‑ttttttt < 7:167543/148‑6 (MQ=255) gATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTTCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCATAATTAAGAAGATTTCCAAAAAAAAGGGCCGCAGATTGTGGC‑CC‑tttttttt < 3:244058/148‑7 (MQ=255) tCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGaaaaa > 7:329194/1‑149 (MQ=255) ttGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACt > 5:169638/1‑149 (MQ=255) ttGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACt > 2:418819/1‑149 (MQ=255) gtgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTg < 8:363962/148‑1 (MQ=255) gtgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTg < 1:308470/148‑1 (MQ=255) tgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTgaa > 1:129484/1‑149 (MQ=255) tgATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCAACAATCTGCGGC‑CC‑TTGACGGAAAAACTga > 7:83721/1‑148 (MQ=255) gATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTgaa < 6:139971/148‑1 (MQ=255) ggCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑GC‑TTGACGGAAAAAGGGAAGAAAt > 6:347446/1‑148 (MQ=255) ggCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAAt < 8:329194/148‑1 (MQ=255) gcCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAgg < 4:376480/149‑1 (MQ=255) ccAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAACCTGAAGAAATCAGGc < 6:232421/149‑1 (MQ=255) ccAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTgaa > 7:322072/1‑139 (MQ=255) ccAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTgaa < 8:322072/139‑1 (MQ=255) aacaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACg < 6:432371/126‑1 (MQ=255) aacaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACg > 5:432371/1‑126 (MQ=255) aacaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCg > 1:49904/1‑148 (MQ=255) aaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAg > 6:393087/1‑149 (MQ=255) aaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAg < 6:385734/149‑1 (MQ=255) gTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAg > 1:91499/1‑147 (MQ=255) aaGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGc > 8:84544/1‑148 (MQ=255) aaGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCg < 6:128653/149‑1 (MQ=255) ttattGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTg < 6:13796/149‑1 (MQ=255) atGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGAATTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATc < 5:347446/148‑1 (MQ=255) ccAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGa < 4:216288/132‑1 (MQ=255) ccAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGa > 3:216288/1‑132 (MQ=255) ccAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCaa > 1:126811/1‑148 (MQ=255) ttCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGc < 1:418819/148‑1 (MQ=255) ttCCTAAAGATTAATTCCTGACACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCTAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGTCGGAAGGAGCGATCAATTGATCAAAATCTGc < 5:428036/148‑1 (MQ=255) tCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCaa > 5:357760/1‑147 (MQ=255) aaGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAgg < 7:31811/149‑1 (MQ=255) aaGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAgg > 2:297221/1‑149 (MQ=255) aGATTAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggc < 2:126811/149‑1 (MQ=255) aGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggc > 5:172516/1‑149 (MQ=255) gAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAgg < 5:11989/106‑1 (MQ=255) gAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAgg > 6:11989/1‑106 (MQ=255) aTTCCTGCCACCCCTAAAAATCGCTTCAGCAGCAGAATTAACAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTa < 7:185923/149‑1 (MQ=255) aTTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGt < 6:330558/148‑1 (MQ=255) aTTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTa < 5:393087/149‑1 (MQ=255) ttCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAg > 5:19899/1‑149 (MQ=255) tCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGc > 6:263471/1‑149 (MQ=255) tGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCC‑AAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATTAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCa > 1:385513/1‑148 (MQ=255) ccaccaCTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCa < 2:91499/147‑1 (MQ=255) ccaccaCTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCC‑AAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATTAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCa < 2:385513/146‑1 (MQ=255) caccacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGa < 5:263471/149‑1 (MQ=255) accacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGAc > 7:337444/1‑149 (MQ=255) ccacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACt < 8:337444/149‑1 (MQ=255) cacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACtt > 7:29384/1‑149 (MQ=255) acTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTTCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCGGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACttt < 3:322849/149‑1 (MQ=255) cTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTg < 6:172516/149‑1 (MQ=255) tAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGc > 1:1793/1‑149 (MQ=255) tAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGc > 1:2536/1‑149 (MQ=255) aaaaTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTc < 2:129484/149‑1 (MQ=255) aaaaTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTc > 5:205835/1‑149 (MQ=255) aaaTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTcc > 3:92167/1‑149 (MQ=255) aTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCAAACAGGCGGCGTAGCTCACGACTTTGCTccgg > 3:267357/1‑149 (MQ=255) gCTTCAGCAGCAGTATTTAGAAGACTTCCAATAAAAAGGGCCCCTATGTGCGGC‑CC‑TTGACTGAAAAACTGAAGATATGAGGCGGAAGGAGCGATCAATTGATCTAAAGCTGCCTACAGGCGGCGTAGCTCACGACTTTGCTccggcc < 6:100283/148‑1 (MQ=255) cagcatcagAATTAAGAATATTTCC‑AAAAAAATGGCCACAATCTGCGGCTCC‑CTGACGGAATTTCTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggt < 1:359037/147‑1 (MQ=255) cagcagAATTAAGAAGATTTCCAAAAAAAAGGGCAACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTa < 6:357760/149‑1 (MQ=255) aTTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACgg < 2:1793/149‑1 (MQ=255) agaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTc > 7:340736/1‑149 (MQ=255) gaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCg < 7:84544/149‑1 (MQ=255) gaagaTTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCg > 8:47859/1‑149 (MQ=255) tttCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTCAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCAt < 8:340736/149‑1 (MQ=255) tCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGa > 4:133714/1‑149 (MQ=255) ccAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGa < 4:142378/148‑1 (MQ=255) ccAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGa > 5:145962/1‑148 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGC‑CCTTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGa > 1:246353/1‑148 (MQ=255) cAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGAc > 1:210418/1‑148 (MQ=255) aaaaaaaaGGGCCACAATCTGCGGC‑CC‑TTGACTGAAAACCAGAAGAAATCACGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACaa < 6:316442/149‑1 (MQ=255) aaaaaaGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAg > 5:376954/1‑148 (MQ=255) aaaaaaGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATAAGGCGGAAGGAGCGATCAATTGATCAAAAGATGCAAACAGGCGGCGTAGCTCACGACTTAGCTCAGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAg > 5:330604/1‑148 (MQ=255) gtcaaGGGCCGCAGATTGTGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGa > 2:168615/4‑149 (MQ=255) gtcaaGGGCCGCAGATTGTGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGa > 4:308723/4‑149 (MQ=255) aaaaGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGAt < 7:325353/149‑1 (MQ=255) gCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGa < 2:2536/149‑1 (MQ=255) acaATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATg > 8:32089/1‑148 (MQ=255) caATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCa > 3:302478/1‑149 (MQ=255) | CTCTACAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACAATCTGCGGC‑CC‑TTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCA > NC_002947/5319604‑5319896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |