| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,323,169 | A→G | 6.0% | L28P (CTC→CCC) | mrcB ← | transglycosylase/transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,323,169 | 0 | A | G | 6.0% | 337.9 / 6.8 | 117 | L28P (CTC→CCC) | mrcB | transglycosylase/transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (57/51); new base G (5/2); total (63/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAGGGACGGCAC > NC_002947/5323024‑5323316 | gCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGa < 7:298615/146‑1 (MQ=255)gCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCt > 3:98377/1‑149 (MQ=255) cTCAACTTCTGGCCGGTGAACAGCTACAGCGGTCGGGCATACAATTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGAAAACCGCCAAGCAGGCAAAGATCACCAGGCCAACCAGGCTGAGCt > 2:427030/1‑148 (MQ=255) tCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGGGCttt > 3:376359/1‑148 (MQ=255) cTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAag < 3:57606/149‑1 (MQ=255) cTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcc > 5:86513/1‑148 (MQ=255) cTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcc < 7:326132/148‑1 (MQ=255) tGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt < 7:122520/140‑1 (MQ=255) tGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt > 8:122520/1‑140 (MQ=255) gCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagc > 5:435186/1‑149 (MQ=255) gCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagc < 1:9475/149‑1 (MQ=255) gCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagccca < 2:200409/147‑1 (MQ=255) ccGCTGAACACCTCCAGCGGACGGGCAAACACTATGGCCGGGATGGTCCAGCGCTTGCCGCACAACGATTCCTGGACCACGGCATCGAGGTAAACCCCGAAGCCCGCAACGAACACCAGCCCAACCACGCAGAGCGTCAAagaccagcc > 4:336467/1‑149 (MQ=255) cGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGGTGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagcc > 1:63324/1‑148 (MQ=255) cGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagccc < 1:134607/149‑1 (MQ=255) cGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagcc > 1:194903/1‑148 (MQ=255) cGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGACGGGATGGTCCAGCGATTGCCGGAGAAGTGTGCCTGGACGACGGCAGCGAGGAAAACCGCGAAGCCGGAAACGAGACCCAGGCCAACCAGACGGGGAGGCAAagcccaacc > 2:391134/1‑148 (MQ=255) gAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCccagcccagc > 4:338921/1‑148 (MQ=255) aCAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCccagccag < 6:435186/149‑1 (MQ=255) aCAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCccagccag < 4:98377/149‑1 (MQ=255) cAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAgg > 4:278731/1‑149 (MQ=255) aGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGgc > 5:296090/1‑149 (MQ=255) cTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGgcgc > 4:283949/1‑149 (MQ=255) cTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGgcgc > 8:314043/1‑149 (MQ=255) cAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCgg < 5:411585/148‑1 (MQ=255) cGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCCGGAGc > 6:262574/1‑149 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGc < 6:86513/149‑1 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGc > 7:214616/1‑149 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGc < 3:338921/149‑1 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGCTCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCg > 5:321529/1‑149 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCcagcccagcc > 2:106319/1‑128 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCcagcccagcc < 1:106319/128‑1 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCg > 4:396833/1‑149 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCACCCCAGCCAGGCGCGGGAGCGGCCGGTCg > 8:69708/1‑149 (MQ=255) acacTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCggg > 2:245598/1‑149 (MQ=255) tttGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGtt > 3:237370/1‑149 (MQ=255) tttGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGtt > 1:213090/1‑149 (MQ=255) ccGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCt > 7:333667/1‑147 (MQ=255) ccGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGa < 3:278731/149‑1 (MQ=255) gATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGCGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGCGCGGCCGGTCGGGCGTTTCTGAgggg > 8:403393/1‑149 (MQ=255) tCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCggg < 6:115716/117‑1 (MQ=255) ccAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCACCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCggg > 8:190650/1‑149 (MQ=255) cAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCggg > 1:215410/1‑148 (MQ=255) aGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGc < 4:130176/144‑1 (MQ=255) aGCGCTTGCCGGAGAACTTTTCCTGGACGACCGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGc > 3:130176/1‑144 (MQ=255) gcgcTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCgggg > 5:360625/1‑147 (MQ=255) gcgcTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCgggg < 6:360625/147‑1 (MQ=255) gcTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTCTCTGAGGGGTGCGGGGAttt > 6:241270/1‑149 (MQ=255) cTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttc < 3:396833/149‑1 (MQ=255) ttGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcg > 1:272114/1‑149 (MQ=255) gCCGGATAACTTTTCCTGGAGGACGGCATCGATGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcg < 1:427030/147‑1 (MQ=255) gCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgg < 6:147112/148‑1 (MQ=255) gCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcg < 5:199600/147‑1 (MQ=255) gCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTCTCTGAGGGGTGCGGGGATttcgg < 5:241270/148‑1 (MQ=255) agaACTTTTCCTCGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcgg < 3:336467/149‑1 (MQ=255) agaACTCTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttc < 5:270243/141‑1 (MQ=255) agaACTATTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttc > 6:270243/1‑141 (MQ=255) gaACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcggg > 2:342402/1‑149 (MQ=255) gaACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcggg < 2:215410/149‑1 (MQ=255) aCTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTtcgggttcgggt > 5:12191/1‑148 (MQ=255) ttttCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGATGGGTGCGGGGATTACGGGTTCGGGTCAt > 2:156355/1‑149 (MQ=255) ttCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCAt < 8:22842/147‑1 (MQ=255) ccTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGATCGGGTCATggcg > 4:157266/1‑149 (MQ=255) gacgacGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATggcggc < 8:214616/147‑1 (MQ=255) gacgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttc > 2:410220/1‑125 (MQ=255) gacgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGAt > 8:76234/1‑148 (MQ=255) ccgGCTTCGCGGTTTACCTCGATGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATta > 5:383038/2‑149 (MQ=255) cgGCTTCGCGGTTTACCTCGATGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATta > 1:250299/1‑148 (MQ=255) cgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATggcgg < 8:398022/141‑1 (MQ=255) cgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATggcgg > 7:398022/1‑141 (MQ=255) cgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATta > 4:423455/1‑148 (MQ=255) ggCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATtata < 8:333667/149‑1 (MQ=255) ggCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATtata < 7:314043/149‑1 (MQ=255) cATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACg > 3:196696/1‑149 (MQ=255) aGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACtt > 7:356663/1‑149 (MQ=255) aaaCCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGGCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTtat > 3:398975/1‑148 (MQ=255) aCCTCGATGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATaa < 6:264895/148‑1 (MQ=255) aCCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCGCAGCCCAGCCACGCGCGGGAGCGGCCGGGCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACACACTTTATaaa < 2:416574/149‑1 (MQ=255) aCCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGGCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATaaa < 4:398975/149‑1 (MQ=255) ccGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAg < 1:280737/149‑1 (MQ=255) cgcgAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAgg < 6:321529/149‑1 (MQ=255) aaGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTgg < 4:196696/149‑1 (MQ=255) aaGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTgg < 6:246090/149‑1 (MQ=255) aaGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTgg < 1:342402/149‑1 (MQ=255) aaGCCGGCAACGATCACCAGGCCAACCAGGATGAGATTAAAAGCCCAGCCCAGCCAGGCGCGGCAGCGTACTGTCGGGCGTTTCTGAGGGGTGCGGTGATTTCGGTTTCGGGTCATGGCGGCGGATTATACGCACTATATAAAGGCTgg > 2:269602/1‑149 (MQ=255) aGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCACCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTggg < 7:69708/149‑1 (MQ=255) gCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTggg > 2:410492/1‑148 (MQ=255) ggCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGa < 7:190650/149‑1 (MQ=255) ggCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGa > 5:168028/1‑149 (MQ=255) aCCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCcggcg < 1:391134/149‑1 (MQ=255) cAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCAAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGCGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCcggcgg > 4:248024/1‑148 (MQ=255) aGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTa < 2:250299/149‑1 (MQ=255) aaCCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAg > 6:402619/1‑149 (MQ=255) gctgggCTGGGCTTTGAAGCTCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAgg > 6:122085/5‑149 (MQ=255) aCCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCGGACGGCCCGGCGGTAGGCAgg > 4:391976/1‑149 (MQ=255) ctgggCTGGGCTTTGAAGCTCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAgg > 1:152269/4‑148 (MQ=255) ggCTGGGCTTTGAAGCTCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAGGGACg > 3:236039/1‑149 (MQ=255) ggCTGGGCTTTGAAGCTCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAGGGACg < 5:122085/149‑1 (MQ=255) gCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAGGGACgg < 3:423455/149‑1 (MQ=255) gAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAGGGACGGCAc > 7:166725/1‑149 (MQ=255) | GCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGCGCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGCACTTTATAAAGGCTGGGCAGACGGCCCGGCGGTAGGCAGGGACGGCAC > NC_002947/5323024‑5323316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |