| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,354,658 | T→C | 5.8% | G11G (GGA→GGG) noncoding (17/97 nt) |
rpsO ← PP_mr54 ← |
30S ribosomal protein S15 S15 regulatory region |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,354,658 | 0 | T | C | 5.8% | 249.7 / 4.4 | 86 | G11G (GGA→GGG) noncoding (17/97 nt) | rpsO PP_mr54 | 30S ribosomal protein S15 S15 regulatory region |
| Reads supporting (aligned to +/- strand): ref base T (40/41); new base C (3/2); total (43/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01 | |||||||||||
TGGCCTTGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGAC > NC_002947/5354512‑5354806 | tGGCCTGGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAAACTGAACTTCCGGGCTACCGGTATCGCCGGCGGCTGGCGGATATTCGGCGACGATCTGAGCTTTTTCTGCAACGCTGAGGGCCATGTGGGTTCGGCGGAT‑AACGGATcc > 4:18109/1‑149 (MQ=255) ggCCTTGCAGCTTGTTGAAGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCACCGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATccc < 3:252189/149‑1 (MQ=255) gCCTTGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATccc < 4:197130/148‑1 (MQ=255) cAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCg < 2:139706/149‑1 (MQ=255) aGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGGTTCTCCTGAT‑AACGGATCCCGCATGCgg < 1:244747/149‑1 (MQ=255) aGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCgg < 7:83272/149‑1 (MQ=255) gCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCggg < 2:218556/149‑1 (MQ=255) gCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCggg > 5:216276/1‑149 (MQ=255) gCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCggg < 3:382261/149‑1 (MQ=255) ttgttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGTGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGt > 8:124310/1‑149 (MQ=255) gttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAATGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTc < 6:40369/148‑1 (MQ=255) gttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTc < 2:292719/148‑1 (MQ=255) gttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTc < 5:228224/148‑1 (MQ=255) attgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTc < 2:27392/147‑1 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCaa > 6:326409/1‑148 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCaa > 8:331765/1‑148 (MQ=255) ttGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAAAGCTGAGGGCCATGTGGCTTCTCCTGATCAACGGATCCCGCATGCGGGGTCCAATAg < 1:247284/148‑1 (MQ=255) gTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGa > 3:302215/1‑149 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAATGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACa > 2:146418/1‑148 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACa > 1:434807/1‑148 (MQ=255) cagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt > 3:80376/1‑149 (MQ=255) cagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt > 1:378196/1‑149 (MQ=255) gagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATcc > 5:427079/1‑149 (MQ=255) gagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATcc < 2:86016/149‑1 (MQ=255) agCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGACCCCGCATGCGGGATccgt < 6:136675/130‑3 (MQ=255) agCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGACCCCGCATGCGGGATccgt > 5:136675/1‑128 (MQ=255) gCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCt < 2:378196/149‑1 (MQ=255) aCCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTa < 3:402297/149‑1 (MQ=255) ccTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTAt > 3:395315/1‑149 (MQ=255) ccTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCGGATAATCGGCAACGATCTGAGCTTTTTCATCAACGCTGATGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTAt < 6:227062/149‑1 (MQ=255) cGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATaaaaaa < 5:316021/149‑1 (MQ=255) cGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATaaaaaa < 7:331765/149‑1 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATaaaaaa < 4:386454/147‑1 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATaaaaaa > 3:386454/1‑147 (MQ=255) gCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 4:80376/149‑1 (MQ=255) gCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 6:427079/149‑1 (MQ=255) cTAGCGGTATTGCCGGCGGCTTGCTGATATTGGGCAACGATCTTAGCTTTTTATTCATGGCTGATGGCCTTGTGGCTTCTCCTGAT‑AACGGATCCCGAATGGGGGTTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgtg < 4:133651/149‑1 (MQ=255) cTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGt < 5:253608/133‑1 (MQ=255) cTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGt > 6:253608/1‑133 (MQ=255) aCCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgtgt > 7:142786/1‑148 (MQ=255) ccGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGTGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgtgt < 6:364944/147‑1 (MQ=255) ccGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGa > 5:372055/1‑149 (MQ=255) ggTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGACCCCGCAt < 1:216758/95‑1 (MQ=255) ggTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGACCCCGCAt > 2:216758/1‑95 (MQ=255) tATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt > 2:149754/1‑149 (MQ=255) tATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt < 6:216276/149‑1 (MQ=255) gCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGcc > 1:300481/1‑148 (MQ=255) ccGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTa > 5:326626/1‑149 (MQ=255) cggcggCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTAc < 2:307023/149‑1 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGc > 4:276772/1‑92 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGc < 3:276772/92‑1 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAc > 2:109858/1‑148 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCGTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAccc > 4:332282/1‑149 (MQ=255) atatTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAccc < 5:326409/148‑1 (MQ=255) atatTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCt > 3:107046/1‑149 (MQ=255) atTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCtt < 6:372055/148‑1 (MQ=255) ttCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGa < 2:97705/149‑1 (MQ=255) cGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATg > 8:106050/1‑149 (MQ=255) aaCGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAggg > 4:271377/1‑86 (MQ=255) aaCGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAggg < 3:271377/86‑1 (MQ=255) aaCGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTAc < 6:426209/127‑1 (MQ=255) aaCGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTAc > 5:426209/1‑127 (MQ=255) gATGTGAGCTTTTTCTTCAACGCTTAGGGCCATGTGGGTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATTGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTggg < 7:76169/149‑1 (MQ=255) aGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCgg > 5:417914/1‑149 (MQ=255) aGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCgg > 2:398289/1‑149 (MQ=255) aGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCg < 1:149754/148‑1 (MQ=255) cTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCCACTGACAGCCACCCTTGATGCCGTGGGGCTCGGc > 5:160940/1‑148 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACGCTTGATGCCGTGGGGCTCGGCAACTGCCt > 2:366941/1‑149 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt > 3:152164/1‑149 (MQ=255) cAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt < 1:109858/147‑1 (MQ=255) cGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAccc > 5:421133/1‑149 (MQ=255) cGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAccc < 3:306714/149‑1 (MQ=255) cGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAccc > 8:285215/1‑149 (MQ=255) aGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCcgcg < 2:300481/148‑1 (MQ=255) cATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg < 7:106050/149‑1 (MQ=255) tgtgGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGt < 6:326626/149‑1 (MQ=255) cTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTc < 4:395315/149‑1 (MQ=255) ttCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTcc > 1:237099/1‑149 (MQ=255) tcCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTTGGGCTCGGCAACTGCCTGACCACGCGGTTTCGGTCATTccgac > 7:399544/1‑149 (MQ=255) tGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccgaccg > 1:199144/1‑148 (MQ=255) gAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccgaccga > 8:57042/1‑148 (MQ=255) gAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGaa > 1:68987/1‑149 (MQ=255) aT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAAt > 8:47210/1‑149 (MQ=255) tattggACCCCGCATGCGGGATCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAAt > 3:21244/5‑148 (MQ=255) cGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGc > 3:176017/1‑149 (MQ=255) gATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGGCCGTGCCTACTGACAGCCACCCTTGATGCCGTAGGGCTCgg < 8:411517/103‑1 (MQ=255) tCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGAc < 7:124310/149‑1 (MQ=255) | TGGCCTTGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGAT‑AACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGAC > NC_002947/5354512‑5354806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |