| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,360,368 | G→C | 5.3% | D157E (GAC→GAG) | rimP ← | ribosome maturation factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,360,368 | 0 | G | C | 5.3% | 234.3 / 3.2 | 75 | D157E (GAC→GAG) | rimP | ribosome maturation factor |
| Reads supporting (aligned to +/- strand): ref base G (35/36); new base C (2/2); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.95e-01 | |||||||||||
CCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATGCGAGGCAAAC > NC_002947/5360220‑5360515 | ccTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAg < 5:233628/149‑1 (MQ=255) tCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGAt < 5:102636/148‑1 (MQ=255) cGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCg > 8:50003/1‑149 (MQ=255) ttGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGt < 7:50003/149‑1 (MQ=255) ttGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGACTCGATCga > 2:238323/1‑147 (MQ=255) ctGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCg < 7:15533/146‑1 (MQ=255) gagaCCGAGTCAACAACCAGGAGGACTTCTTTCCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGACTCGATCgacaa < 8:301596/145‑5 (MQ=255) gATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTaa > 2:276922/1‑148 (MQ=255) gATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGACTCGATCgacaag < 1:238323/149‑6 (MQ=255) aTACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTaa > 5:50562/1‑147 (MQ=255) aTACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACa < 4:12661/149‑1 (MQ=255) aCCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAg > 3:76708/1‑148 (MQ=255) ccGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCGCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAgg > 8:365108/1‑148 (MQ=255) cGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGaa > 5:193064/1‑149 (MQ=255) aacaacCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTg < 5:103881/149‑1 (MQ=255) aacaacCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTg < 8:73740/149‑1 (MQ=255) aacaacCAGCAGTACTTCTTTGCTCATAGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCAGCCGGGACCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTACTg > 5:139970/1‑149 (MQ=255) acaacCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTgg < 6:50562/149‑1 (MQ=255) aacCAGCAGTACTTCTTTGCTCATCGTACGCCTAGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTAGAGCGGTAACAGGAACTACTGGtt > 4:131435/1‑149 (MQ=255) cagcagTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTc < 1:276922/149‑1 (MQ=255) cagTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATTGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCAc < 7:72513/149‑1 (MQ=255) cttcttTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTgg < 6:193064/148‑1 (MQ=255) tGCTTATCGTCAGTCTCTCCTTGCGGAAGCCATTGGGGCCGGTTAGTCCGCGGGTGGCGGGACGTCTGAGTCAAAATTGGGAATTATTTTGGCCTTGTCGATCGAGTTGATGGGTATCAGGAACTCCTGGTTGTCCACCTGGaccac < 6:369062/147‑1 (MQ=255) gCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGGTAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAAGAGGAACTCGGGGGTGTCCa > 4:127186/1‑136 (MQ=255) gCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGGTAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCa < 3:127186/136‑1 (MQ=255) cTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACcaccac > 5:349960/1‑148 (MQ=255) cTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACcaccac < 6:349960/148‑1 (MQ=255) cATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATc > 3:77360/1‑149 (MQ=255) agcggaCGCCTCGCCCTGCGCAAGCCATTGGGCCCGGATCGTCCGCCGGGCCCGGCACGTCTCAGGCAAAACTGGGAATAATATTGGCCTTGGCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATc < 7:270852/143‑1 (MQ=255) cgcctcgcctTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGctcc < 4:77360/149‑1 (MQ=255) gcctcgcctTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGctcct < 3:114428/149‑1 (MQ=255) cctcgcctTCCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACCTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAAAAGGAACTCCAGGTTGTCCACCTGGACCACCACAACCTGctcctc > 2:277949/1‑149 (MQ=255) ctTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTgg < 8:295948/111‑1 (MQ=255) ctTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTgg > 7:295948/1‑111 (MQ=255) cATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACAACCACATACTGCTACTCCACACCGCG‑GAGAAGGc > 6:12810/1‑149 (MQ=255) ggCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTg > 6:120719/1‑148 (MQ=255) cccGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTTGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa < 5:12810/149‑1 (MQ=255) cccGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa < 3:187255/149‑1 (MQ=255) cccGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa < 6:29653/149‑1 (MQ=255) cccGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa < 2:317828/149‑1 (MQ=255) cccGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGGCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa < 7:158886/149‑1 (MQ=255) tCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTacgac > 2:163488/1‑148 (MQ=255) tCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTacgac > 3:145951/1‑148 (MQ=255) cgccgGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACgacgac < 1:163488/149‑1 (MQ=255) cgGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCt < 5:120719/149‑1 (MQ=255) gCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGCAGGCCCTGGAAGTTACGACGACCcgcg > 4:422993/1‑148 (MQ=255) cccGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCg‑g > 6:94039/1‑117 (MQ=255) cccGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCg‑g < 5:94039/117‑1 (MQ=255) cccGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGaa < 4:145951/149‑1 (MQ=255) ccGGCAAGTCTGAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACATGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCGAGAGAAGGGCCTGGAAGTTACGACGACCCTCGaa < 1:277949/149‑1 (MQ=255) ggCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAggg > 1:143145/1‑149 (MQ=255) gCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGt < 8:168904/149‑1 (MQ=255) aCGTCTCAGTCAAAACTGGGAATAATATTGTCCTAGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGa < 4:298873/149‑1 (MQ=255) gTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAgc > 2:9257/1‑149 (MQ=255) tcAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAgcg > 1:412553/1‑147 (MQ=255) gTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCt > 3:420312/1‑149 (MQ=255) gTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGACCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCt > 3:308893/1‑149 (MQ=255) tCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa < 2:109915/116‑1 (MQ=255) tCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGaa > 1:109915/1‑116 (MQ=255) tCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCtt < 4:200857/149‑1 (MQ=255) tCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGAACACCACATCCAGCTACTACAAACCGAG‑GAGAAGGCACTGGAAGTTACGACGACCCTAGAAGGGTGAGCTCAACtt > 5:262400/1‑149 (MQ=255) aaaGTGGCAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGAt < 3:131435/149‑1 (MQ=255) cTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCtt < 4:76708/149‑1 (MQ=255) tGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCtt > 5:281375/1‑148 (MQ=255) gAATAATATTGGCCTTGTCGATAGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACt < 7:365108/149‑1 (MQ=255) aataatATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACtt > 1:70530/1‑149 (MQ=255) aataTTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCAAACCGCG‑GAGAAGGCCCTGGAAGTTACGAAGACCCTCGAAGGGTGAGCGCACCTTGATCTTCACTTGt > 1:195531/1‑148 (MQ=255) atTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGc > 8:215281/1‑149 (MQ=255) ggCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACGCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCg < 6:139970/148‑1 (MQ=255) ggCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCgg > 5:393571/1‑149 (MQ=255) gCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCgg > 7:33969/1‑148 (MQ=255) ttaccgatcgaCTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATg > 3:89943/5‑149 (MQ=255) cgatcgaGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATGCGAg > 1:63410/1‑149 (MQ=255) gatcgaGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCC‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATGCGAgg > 6:63680/1‑149 (MQ=255) tcgaGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATGCGAGGc > 8:152835/1‑148 (MQ=255) aGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATGCGAGGCAAAc < 2:143145/149‑1 (MQ=255) | CCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGTCTCAGTCAAAACTGGGAATAATATTGGCCTTGTCGATCGAGTCGATCGGTAACAGGAACTCCTGGTTGTCCACCTGGACCACCACATCCTGCTCCTCCACACCGCG‑GAGAAGGCCCTGGAAGTTACGACGACCCTCGAAGGGTGAGCGCAGCTTGATCTTCACTTGTTCGCCGGCATGCGAGGCAAAC > NC_002947/5360220‑5360515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |