| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,518,736 | T→A | 6.5% | K59* (AAA→TAA) | PP_4851 ← | phosphate starvation‑inducible protein PsiF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,518,736 | 0 | T | A | 6.5% | 203.5 / 2.9 | 71 | K59* (AAA→TAA) | PP_4851 | phosphate starvation‑inducible protein PsiF |
| Reads supporting (aligned to +/- strand): ref base T (34/32); new base A (2/3); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTG > NC_002947/5518589‑5518883 | gTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTg < 1:426218/149‑1 (MQ=255)gTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTg < 6:171397/149‑1 (MQ=255) tCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGc < 5:187878/149‑1 (MQ=255) tCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGc < 6:96161/149‑1 (MQ=255) aTTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCg < 6:378074/148‑1 (MQ=255) aTTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGATCATCCCCCTTCAGGGCTTTGGTGGTGGCGGCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGt < 8:386020/149‑1 (MQ=255) cttcttcCGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCa < 7:298019/148‑1 (MQ=255) cttcttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCa < 2:240407/148‑1 (MQ=255) tcttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCg > 5:186223/1‑149 (MQ=255) cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAtga < 7:141240/148‑3 (MQ=255) ttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTAAGGCAGGTGATCATGAACGCTTTGGGTTCATCGcc > 6:80204/1‑149 (MQ=255) cAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGccc < 6:186223/148‑1 (MQ=255) cAATGGCTCATGAAGGCCTTGCGCTCTTGCCCCTTCAGTGCTTTGGTTGTGGGGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGTGGCACATCCTTTTTCAGGCAGGTTCTCATGAACGCTTTGCGTTCATCGCCCTTGAg < 5:281726/149‑1 (MQ=255) gCTCATGAAGGCATTGCGATCATCCCCCTTCAGGGCGTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGATTGGGGCACATCCTTTTTCAGGCAGGTGATCATGAACGCCTTGCGAGAATCGCCCTTTAGGGCCt > 8:208709/1‑149 (MQ=255) tCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCATGCTGCGATTTGGGCACATCCTTATTCAGGCAGGTGCTCATCAACGCTTTGCGTTAATCGACCTTAAGGTCCtgg > 8:206809/1‑147 (MQ=255) aTGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATATTTTCATGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATAGCGCTTGAGGGCCATGGc > 3:149727/1‑149 (MQ=255) tGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCg < 2:343192/149‑1 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCt > 8:79888/1‑134 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCt < 7:79888/134‑1 (MQ=255) aaGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGt < 7:22375/149‑1 (MQ=255) aGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCgggg < 2:94663/149‑3 (MQ=255) aGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGG‑TTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTg < 4:120343/148‑1 (MQ=255) ggCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGGGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTgg < 6:225343/149‑1 (MQ=255) acTTTCGCTCATCACCCTTGAGGGATTTGTTTGTGGCGTCAGCTTTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGTGGCATATGCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGc < 8:306431/147‑1 (MQ=255) cTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTGTTCATATTTTCATGCTGGGTTTGATTCACATCGTTTAACTGGCAGTTGCTAAAGAAAGCTTTTCGTTAATCGGCATTGCTTTCGTTGTCGGTGGCGt > 6:250410/1‑149 (MQ=255) cTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCGCATCGTTTTTCAGGGACGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTAGggcgtggcgt > 5:353975/1‑149 (MQ=255) cATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTATTCATTTTTTCATGCTGGGTTTGGGTCACATCGTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGGTCATCCCCCTTGAGGGCCATGGCGGTGGCGTCGGCGTTg > 3:135428/1‑149 (MQ=255) cccccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGGTTGGGGCCCATCCTTTATCAGGCAGGTGCTCATGACCGCCTTCGGGTGATCGCCCTAGAGGGCCTTGGCGGGGTCGTCGGGGTGGCat > 4:296457/1‑148 (MQ=255) ccccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAgg > 2:437406/1‑149 (MQ=255) ccccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTATTCATTTTTTCTTGCTGGGATTGGGTCACATCGTTTTACTGGCAGGTGCTAATAAACGCTTAGAGTTCATAAAAGTTGAGGTCGATGTCGGTGGCGTAGGCGttaaagg > 6:337451/1‑144 (MQ=255) cccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCACTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGt > 5:1760/1‑149 (MQ=255) ccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGtt < 1:437406/149‑1 (MQ=255) ccTTCACGGCCTTGGCGGTGGCGTCAGCATTGCATGTCTTCATTTTTTCTTGCTTGGTTTTGGTCACATCATTTTTCAGGCAGTTGCTCATTAAAGGCTTGCGTTCATAGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGtt < 6:1760/149‑1 (MQ=255) catgtcgttGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGTCACATCC‑TTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTc < 4:3646/140‑1 (MQ=255) ggCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATAGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCt > 1:428224/1‑149 (MQ=255) gCTTTGGTGTTGGCGTGAGCATTGGAGGGCTTCATTTTTTCTTGCTGTGTTTGCGGCACATGCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCt < 3:333062/148‑1 (MQ=255) tttGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTACAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGTCGGTGGCGTCGGCGTTGCAGGTTTTCATCttt > 6:343758/1‑148 (MQ=255) tggtggtggCGTCTGCATTGCAGTTCTTCATTTTTTCTTGCTGGGTTTGTGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTc < 5:217919/148‑1 (MQ=255) gtggtggCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctg > 1:318933/1‑149 (MQ=255) tggtggCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctgc > 6:115405/1‑149 (MQ=255) gtggCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctgct < 5:115405/148‑1 (MQ=255) ggCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTAATCTTTTccatggggg > 1:156939/1‑142 (MQ=255) gCATTGCTGGTCTTCATTTTTTCTTGCTGGGTGTGGGGCACATCCTTTTTCAGGCATGTGCTCATGAAGGCTTTGCGTTCATCGCCCTTGAGGGCCTTTGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTAtt < 7:206809/149‑1 (MQ=255) cAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAgt > 5:83782/1‑148 (MQ=255) cAGGTCTTAATTTTTTCTTGATGGGTTTGGTGCACTTCCTTTTTGAGGCAGGTGCTGATGACCGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGc < 5:337451/149‑1 (MQ=255) ggTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGcgcg < 2:77774/136‑1 (MQ=255) ttCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGGTTTCATGTTTTCCTGCTGCGCGGGATTGGCAGCGACAcc > 4:246901/1‑149 (MQ=255) aTTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTgg > 1:256002/1‑136 (MQ=255) aTTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTgg < 2:256002/136‑1 (MQ=255) aTTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTAATGAACTCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTg < 5:250410/149‑1 (MQ=255) ttttttCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTgg > 1:80278/1‑149 (MQ=255) ttttttCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTgg > 6:42154/1‑149 (MQ=255) gCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGTGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaa > 2:197863/1‑148 (MQ=255) gCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGcgcg < 6:305311/119‑1 (MQ=255) gCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGcgcg > 5:305311/1‑119 (MQ=255) gCTGGGTTTGGGGCACATCC‑TTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaac > 8:255488/1‑148 (MQ=255) gCTGGGGTGGGGGCACTTGCTTTTTCAGGCAGGAGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTTTTGGCAGCGAAACCTTGGGCACTGaa < 3:359701/148‑1 (MQ=255) cTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaac > 6:276489/1‑148 (MQ=255) tGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACGTTGGGCACTGaacaa > 1:69860/1‑149 (MQ=255) gCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagc > 2:125845/1‑149 (MQ=255) gCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGACGGCGTTGCAGGTTTTCATCTTTTCCTCCTGAGCGGTATTGGCAGCGAAACCTTGGGCCCTGAACAACACcgacagc > 8:154912/1‑149 (MQ=255) atgcTTTTTACGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgcca < 3:296457/146‑1 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCGTCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc > 4:379505/1‑147 (MQ=255) ttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCTGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACg < 2:318933/148‑1 (MQ=255) caggcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGa > 2:114047/1‑149 (MQ=255) aggcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGCACAACACCGCCAGCGCCAGTAACGGGAt > 7:319314/1‑149 (MQ=255) aggcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGAt > 6:109880/1‑149 (MQ=255) aTGAACGCAAAGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACtt > 6:111711/1‑148 (MQ=255) aCGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATg > 5:372251/1‑149 (MQ=255) cGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATg < 5:343758/148‑1 (MQ=255) gCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGa < 7:255488/149‑1 (MQ=255) tttGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGt < 7:208709/149‑1 (MQ=255) tttGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGCTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGt > 4:299683/1‑149 (MQ=255) tGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTg < 5:276489/148‑1 (MQ=255) tGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTg < 2:428224/148‑1 (MQ=255) | GTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTG > NC_002947/5518589‑5518883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |