| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,559,744 | A→G | 7.3% | A251A (GCT→GCC) | hisZ ← | ATP phosphoribosyltransferase regulatory subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,559,744 | 0 | A | G | 7.3% | 270.1 / 8.8 | 96 | A251A (GCT→GCC) | hisZ | ATP phosphoribosyltransferase regulatory subunit |
| Reads supporting (aligned to +/- strand): ref base A (49/40); new base G (5/2); total (54/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
TATCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCGGCC > NC_002947/5559596‑5559891 | tatCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCa < 6:178351/149‑1 (MQ=255)tatCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCa < 8:244206/149‑1 (MQ=255)tatCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCa < 3:112311/149‑1 (MQ=255)tatCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCa < 2:414790/149‑1 (MQ=255)tatCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCa < 6:373779/149‑1 (MQ=255) tcgtcgTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGc < 3:297006/149‑1 (MQ=255) caatcGATCGCCCAGGGCGGTCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCg > 2:232385/5‑149 (MQ=255) atcGATCGCCCAGGGCGGTCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTCCAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGc > 7:342930/3‑148 (MQ=255) aGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGc > 3:29896/1‑148 (MQ=255) gACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGTGATCGCcag > 1:113372/1‑148 (MQ=255) aCCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CTGGCGATCGCTGATCGcctggc < 5:444373/149‑5 (MQ=255) aCCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCGGCGATCGCcag > 7:290460/1‑147 (MQ=255) aCCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCcagca < 5:422324/149‑1 (MQ=255) aCCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCcagca < 3:215105/149‑1 (MQ=255) aCCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCcagca < 3:168776/149‑1 (MQ=255) ccGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCcagcag < 5:347279/149‑1 (MQ=255) ccGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAACGATCGCcagcag < 6:355484/149‑1 (MQ=255) ccGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCGCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCcagcag < 6:439482/149‑1 (MQ=255) cGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCCAGAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCcagcag < 1:348490/149‑1 (MQ=255) cccTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAgga > 2:131366/1‑147 (MQ=255) tGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATc > 5:186099/1‑149 (MQ=255) tGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGCTAGCGCGACGC‑CCGGCGATCAGCGATCGCCAGCCGGTCagc > 8:412100/1‑147 (MQ=255) ggCGATCGATTGGCCTTCGCCTGGCAGGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCTCGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATc < 4:105577/147‑1 (MQ=255) ggCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATc > 7:382428/1‑147 (MQ=255) gatcgatTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAgcg > 8:32196/1‑149 (MQ=255) gCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCa > 4:332530/1‑149 (MQ=255) ccTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCAc > 2:8911/1‑149 (MQ=255) cGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTg > 3:208249/1‑149 (MQ=255) tGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCg > 3:205363/1‑149 (MQ=255) cACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCgggg > 7:309401/1‑149 (MQ=255) aCGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGgc > 7:77221/1‑149 (MQ=255) gAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCgggg < 3:277976/146‑1 (MQ=255) gAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCgggg > 4:277976/1‑146 (MQ=255) gAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGgcgc > 6:354307/1‑149 (MQ=255) gAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGgcgc < 4:208249/149‑1 (MQ=255) acacGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGa > 7:392297/1‑149 (MQ=255) cacGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGAc < 8:77221/149‑1 (MQ=255) acGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGAcc > 8:184802/1‑149 (MQ=255) acGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGAcc < 4:29896/149‑1 (MQ=255) gCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAg < 8:382428/149‑1 (MQ=255) gAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGgc < 8:254172/149‑1 (MQ=255) gAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGgc < 1:291690/149‑1 (MQ=255) gAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGgc < 1:410378/149‑1 (MQ=255) aaCACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGgcg < 8:392297/149‑1 (MQ=255) accacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAc > 5:273542/1‑149 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAgc > 4:268314/1‑109 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAgc < 3:268314/109‑1 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 7:184862/1‑149 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 2:295605/1‑149 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 6:256145/1‑149 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 3:280480/1‑149 (MQ=255) gCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCggg > 5:246739/1‑149 (MQ=255) tgtgGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCa < 4:205363/149‑1 (MQ=255) tggtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCGGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGc < 8:290460/149‑1 (MQ=255) tggtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAg < 7:97581/148‑1 (MQ=255) tggtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGc < 7:190815/149‑1 (MQ=255) gtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGc > 1:380746/1‑147 (MQ=255) gtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGc < 2:380746/147‑1 (MQ=255) gtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCa < 8:342930/149‑1 (MQ=255) tagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAg < 8:309401/149‑1 (MQ=255) gtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGAGCGAGGCGCACGCGGGCTTCAGcccg > 8:174743/1‑145 (MQ=255) gtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTa > 6:156460/1‑149 (MQ=255) gtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGgc < 6:68502/125‑1 (MQ=255) gtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑Ctt < 5:381721/149‑1 (MQ=255) ccACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGc > 4:29547/1‑137 (MQ=255) cACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAg > 8:378897/1‑139 (MQ=255) cACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAg < 7:378897/139‑1 (MQ=255) cACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGa < 1:232385/149‑1 (MQ=255) gCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGAccacca < 7:374452/149‑1 (MQ=255) c‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGacca < 6:318161/140‑1 (MQ=255) tCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGAc > 6:344988/1‑149 (MQ=255) tCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGAc < 1:295605/149‑1 (MQ=255) tCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGAc < 1:8911/149‑1 (MQ=255) gAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGAc > 3:392140/1‑147 (MQ=255) gAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCa < 6:186099/149‑1 (MQ=255) gTACAGCGGCAGGTCCGGGTAGCGCGACGCGCAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAgg > 1:260433/1‑149 (MQ=255) cAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGgcgc > 4:292651/1‑149 (MQ=255) aGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGgcgcg > 3:22018/1‑149 (MQ=255) gCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGgcgcg > 3:168821/1‑148 (MQ=255) cGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCa < 4:338117/68‑1 (MQ=255) cGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCa > 3:338117/1‑68 (MQ=255) cGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGgcgcg > 6:252799/1‑147 (MQ=255) ggCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCgcag < 6:273542/149‑1 (MQ=255) gTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATTCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCAtgc > 8:38559/1‑149 (MQ=255) gcgACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCt > 7:100951/1‑149 (MQ=255) gcgACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCt > 1:202934/1‑149 (MQ=255) gACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCttt > 7:179511/1‑149 (MQ=255) aCGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTc < 7:32196/149‑1 (MQ=255) gC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg < 4:22018/149‑1 (MQ=255) gC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg > 7:251159/1‑149 (MQ=255) ctgctggCGATCGCTGATCGCCTGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCg > 2:122273/6‑149 (MQ=255) ctgctggCGATCGCTGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCg > 6:21143/6‑149 (MQ=255) ctgcAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCg > 2:221026/4‑149 (MQ=255) gctggCGATCGCTGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGACGAGGTCTTTCgg > 7:186682/4‑148 (MQ=255) tggCGATCGCTGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTG‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAg > 3:63380/2‑149 (MQ=255) aGGAGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGAACACCACACAGCTCGACCAGGGCGCGCAGCATCCTTCCCAGTTCTATCGGCAg > 8:366090/1‑149 (MQ=255) ggCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAgg < 5:354307/149‑1 (MQ=255) gATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCg > 4:309832/1‑149 (MQ=255) cAGCGATCGGCATCAGGTCATGCAGCGCCGCCAGCACGCTGGCCGGGGCGGGACCGAGGCGCACGCGGGCTTCAGCCAGTATCTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCgg < 1:131366/148‑1 (MQ=255) aGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCGGcc < 2:202934/148‑1 (MQ=255) | TATCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGC‑CAGGCGATCAGCGATCGCCAGCAGGTCATCCAGCGCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTA‑CTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCGGCC > NC_002947/5559596‑5559891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |