| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,570,179 | C→A | 8.4% | A24S (GCA→TCA) ‡ | nnrD ← | ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,570,179 | 0 | C | A | 8.4% | 217.7 / 7.5 | 71 | A24S (GCA→TCA) ‡ | nnrD | ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (28/36); new base A (4/2); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
CTCGGGCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTCCGCCTCTAC > NC_002947/5570033‑5570327 | cTCGGGCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCtgccgtgccg < 5:433960/149‑1 (MQ=255) gggCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCgg < 4:124065/147‑1 (MQ=255) ggCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAg < 1:292393/149‑1 (MQ=255) cGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCg > 4:181808/1‑149 (MQ=255) gggTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCgg < 7:348640/149‑1 (MQ=255) ggTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCggg < 6:339838/149‑1 (MQ=255) gCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAAc > 3:216428/1‑149 (MQ=255) ctcggtGAGCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGACTCCGGTACCCAGGTCGCCCCCGACCAC‑GAGTACATGGGCAATGTCGGCTTTGTGGGCATGCGCCtgccgtgc < 8:21882/127‑1 (MQ=255) cACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCtgccgtgc > 7:21882/1‑132 (MQ=255) cACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCg > 5:265829/1‑149 (MQ=255) ccAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctg < 6:392452/149‑1 (MQ=255) cAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCCCgctgc > 3:358091/1‑149 (MQ=255) cAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgc > 3:36984/1‑149 (MQ=255) cccGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgct > 2:16321/1‑147 (MQ=255) cccGGCGCCGCAACGCAGGGCGGCGTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGGCGCCCCCGACCAC‑CAGTACATGGCCAAAGGCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGa < 6:226724/149‑1 (MQ=255) cGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAg > 4:73802/1‑148 (MQ=255) gccgcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAAtt < 4:136336/149‑1 (MQ=255) gccgcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAAtt < 3:227972/149‑1 (MQ=255) cgcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCa < 1:374280/132‑1 (MQ=255) cgcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCa > 2:374280/1‑132 (MQ=255) cgcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATtgt < 6:265829/149‑1 (MQ=255) gcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATtgtg < 4:216428/149‑1 (MQ=255) cAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTgg < 5:368622/149‑1 (MQ=255) aaCGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTggg < 3:181808/149‑1 (MQ=255) aaCGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTggg < 7:299439/149‑1 (MQ=255) aaCGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTggg < 4:354665/149‑1 (MQ=255) aCGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGCGCACCCGTCACGCTGCTGAGCAATTGTggcg > 4:249777/1‑147 (MQ=255) gcggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACt < 3:352631/149‑1 (MQ=255) ggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑At < 2:300707/143‑1 (MQ=255) ggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑At > 1:300707/1‑143 (MQ=255) ggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTgg < 3:73802/149‑1 (MQ=255) ttCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGgt > 7:88997/1‑149 (MQ=255) cACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTg < 7:129126/149‑1 (MQ=255) cACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTg < 6:254019/149‑1 (MQ=255) aGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTc < 1:16321/147‑1 (MQ=255) acacAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACTCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCATGCCGTGCCGGCAGGCGGGCAACCGTCAGGCTGCTGAGCAATTGTGGGGC‑ATTAAGGGGGTGTTTGGTATGCg > 1:77825/1‑148 (MQ=255) caGGGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTTCATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATg < 6:96752/149‑1 (MQ=255) gcgcCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATggg < 7:185524/149‑1 (MQ=255) cgcCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATgggg < 5:382953/149‑1 (MQ=255) ccTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGt > 4:410187/1‑148 (MQ=255) ccTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGt > 5:362649/1‑148 (MQ=255) ccTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGt > 3:128955/1‑148 (MQ=255) ggTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATtgt > 4:245390/1‑106 (MQ=255) ggTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATtgt < 3:245390/106‑1 (MQ=255) cccAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTc > 4:104290/1‑148 (MQ=255) cccAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTc < 2:77825/148‑1 (MQ=255) gCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCt < 6:318577/148‑1 (MQ=255) gCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGGGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCt < 8:312189/148‑1 (MQ=255) ccccGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGc < 4:229966/149‑1 (MQ=255) cccGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGTGCAGGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCa < 3:249777/149‑1 (MQ=255) ccac‑caGTACTTGGCCAAAGTCGCCTTTGTGGGCATGCGCGTGCCGTGGCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAtt < 4:128955/149‑1 (MQ=255) ccac‑caGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAt > 7:273197/1‑148 (MQ=255) ac‑caGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTcc > 6:79538/1‑131 (MQ=255) ac‑caGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTcc < 5:79538/131‑1 (MQ=255) caGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATAc < 6:150300/149‑1 (MQ=255) aTGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCt > 6:318583/1‑149 (MQ=255) tGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCt > 6:335115/1‑148 (MQ=255) ggCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCGATTGTCTGGCAGAATTATACGCACCt > 8:301581/1‑147 (MQ=255) ccAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGc < 2:364105/149‑1 (MQ=255) cAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGcc > 8:276329/1‑149 (MQ=255) aaaGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGccc > 3:368129/1‑149 (MQ=255) gTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTa < 4:36984/149‑1 (MQ=255) gCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCt < 2:330180/118‑1 (MQ=255) gCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCt > 1:330180/1‑118 (MQ=255) tgtgGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGCGCCCGTAttgccttg > 2:108543/1‑149 (MQ=255) tgGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgccttgc < 3:104290/148‑1 (MQ=255) gCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGG‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccat > 5:87998/1‑149 (MQ=255) gCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccat > 5:72242/1‑149 (MQ=255) cccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgccttg > 1:365973/3‑141 (MQ=255) cccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgccttg < 2:365973/139‑1 (MQ=255) ccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGCTATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatcca > 1:120249/2‑149 (MQ=255) cgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGACTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATg > 1:87543/1‑149 (MQ=255) ccTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgcct < 5:17687/135‑1 (MQ=255) ccTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgcct > 6:17687/1‑135 (MQ=255) ccgtgccgGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTCCGcc > 1:33028/1‑149 (MQ=255) ccgTCAGGCGGGCAACCGGCCCGCTGCTGAGCAATTGGGCGTC‑ATTACTGGGGTGGTTGGTCTGCGGCATGGGGTCACAGGCTCCAATGTCTGGCAGAATTCTACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTCCGCCTCTac < 6:383358/149‑1 (MQ=255) ccgGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGGATTGCCTTGCCCCTCCATGTCCGCCTCTa > 7:212842/1‑148 (MQ=255) | CTCGGGCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCAC‑CAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGC‑ATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTCCGCCTCTAC > NC_002947/5570033‑5570327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |