| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,751,730 | G→T | 5.5% | intergenic (‑168/‑303) | thiI ← / → glnA | tRNA sulfurtransferase/glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,751,730 | 0 | G | T | 5.5% | 263.5 / 3.3 | 83 | intergenic (‑168/‑303) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base G (38/40); new base T (2/3); total (40/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.26e-01 | |||||||||||
GCCTGCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCAC > NC_002947/5751583‑5751875 | gCCTGCCGAAAATGAGGGGCTCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGt < 7:160764/149‑1 (MQ=255)gCCTGCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGt < 8:253945/149‑1 (MQ=255) ccTGCCGAAAATGAGGGGCGCGAATTATATCCGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTg < 6:262809/149‑1 (MQ=255) ccGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCa > 7:360089/1‑147 (MQ=255) aaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTAATGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGccc > 1:130381/1‑149 (MQ=255) aaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCg > 8:83563/1‑149 (MQ=255) aTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCg > 6:196836/1‑148 (MQ=255) tGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTa < 4:208902/149‑1 (MQ=255) aGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGAGGTGCAAAGCCCGTAg < 6:53897/148‑1 (MQ=255) cgcgAATTATATCTGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGTCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCgg < 5:438171/149‑1 (MQ=255) cgcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCgg < 8:80884/149‑1 (MQ=255) cgcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCgg > 3:53948/1‑149 (MQ=255) cgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGt < 5:382946/149‑1 (MQ=255) ttATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTAc < 1:154309/149‑1 (MQ=37) tataTCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAcc > 7:32129/1‑149 (MQ=255) atatCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAcc < 3:284436/148‑1 (MQ=255) tctgAAATTGCTCAGGATTTGACCAACTTTTGTTCAGAAGCT‑TTGAGATTAATTCAGAGGCCATGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCTTGTA‑AACCCGCGCCTACAGTCGGTGCAAAGCCCGTAGGAGCGGGTTTACCcga < 8:78079/145‑2 (MQ=38) tCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCcgc < 6:143385/148‑1 (MQ=255) aaaTTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAaga < 7:86471/149‑1 (MQ=255) gCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGcc < 3:138862/148‑1 (MQ=255) tCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGccc > 5:422089/1‑147 (MQ=255) tCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATACAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCTCTTCGCGGGTA‑AACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGcgcg > 8:268106/1‑126 (MQ=21) tCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATACAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCTCTTCGCGGGTA‑AACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGcgcg < 7:268106/126‑1 (MQ=21) cAGGATTTGACCAACTTTTGATCAGAAGCT‑TTCAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCCGCTA‑AACCCGCGACTACAGGCGGTGCAAAGCCCGTAGCAGCGGGTTTACCCGCGAAGATGcac > 1:85143/1‑144 (MQ=255) aGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGTCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCCCGCCTTCAAGCGGGGGAAACCCCCGAGGAGCGGGTTTTACCGCGAAGAGGCCCTaa > 5:291933/1‑147 (MQ=255) aTTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAAcc > 5:181640/1‑149 (MQ=255) gACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑Tgg < 7:83563/148‑1 (MQ=255) gACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑Tgg < 5:379008/148‑1 (MQ=255) gACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑Tgg < 2:271475/148‑1 (MQ=255) gACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑Tgg < 2:130381/148‑1 (MQ=255) aCCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGca < 5:196836/149‑1 (MQ=255) aCCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGGTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGc < 5:346251/148‑1 (MQ=255) ccAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGCTTTACCCGCGAAGAGGCCCTAGAACC‑TGTcac < 8:280367/149‑1 (MQ=255) tCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCGTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTcacg < 8:360089/148‑1 (MQ=255) tCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTcacgc > 4:346583/1‑149 (MQ=255) aGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACTGTCGGTGCAAAGCCCGTAGGTGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTcacgcc < 6:95795/148‑1 (MQ=255) aGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTcacgcca > 3:353520/1‑149 (MQ=255) gAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCAGGCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑Tg > 1:72140/1‑132 (MQ=255) gagaTAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCCCACCACTCACGCCACGCACCCTa > 1:255135/1‑149 (MQ=255) agaTAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTa < 4:53948/148‑1 (MQ=255) tAAATGCAGCGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTg < 1:185106/148‑1 (MQ=255) atccAGCGGCCTGGTTTGCCA‑GCCCGTGTTCCGCCCTTTGCGCGGTAA‑ACCCCGCGCCTCCAGGGGGTCAAACGCCGTTTGCTGGGTTTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGc < 6:291933/146‑1 (MQ=255) tGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGc < 1:372056/148‑1 (MQ=255) gCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTAATGGTgg > 2:372056/1‑146 (MQ=255) gCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGGATAACCCCCG‑CGACAGGCGGGGGAACGCCCGTGGGCGGCGGGTTAGCCCCGCAGCGGCCCGAACACC‑AGGCGCCCCCCACCCGCCCCCCACCCCAATggggggt > 8:343386/1‑144 (MQ=255) cAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGac < 4:353520/149‑1 (MQ=255) agagGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGaca < 8:156651/149‑1 (MQ=255) agGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTg > 7:358999/1‑142 (MQ=255) agGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTg < 8:358999/142‑1 (MQ=255) gCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCCCCCTATTGGTGCGACACGAt > 8:125077/1‑149 (MQ=255) ccAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGGTTACCCGCGCAGAGGCCCTAGAACC‑TGGGCCACCACTCACGCCACGCCCCCAATTGGTGGGACACGAt > 4:404384/1‑148 (MQ=38) cA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGc > 7:311661/1‑148 (MQ=255) gcgcCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAGAGCCCGTAGGAGCGGGTTTACGCGCGAAGAGGCCCTAGAACC‑TGGCACCCCACTGACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATc > 5:325499/1‑149 (MQ=255) gcCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCg > 2:152328/1‑148 (MQ=255) ccGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGt < 8:56360/148‑1 (MQ=255) ccGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTg > 2:75378/1‑149 (MQ=255) cGGCCCTTTGGCGGTTA‑ATCCCGCGCCTATTGGCGGTGCAAATCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACAACTCACGCCACGCACCCTATTGGTGCGACACGTTCAAAAAACGCATCGTAAGGGTg < 2:255135/148‑1 (MQ=255) ggCCCTTTCGCGGGTA‑AACCCGCGCCTACCGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACAACTCACGCAACGCACCCGATTGGTGCGACACGAGCAAAAAACGCATAGAAAGCGTGCa > 3:363855/1‑149 (MQ=38) cccTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACt < 3:346583/149‑1 (MQ=255) ccTTTCGCGGGTA‑ACCCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCTGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACtt < 8:400488/149‑1 (MQ=255) ccTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACtt > 8:106699/1‑149 (MQ=255) ccTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACtt < 7:106699/149‑1 (MQ=255) tCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCa > 7:43200/1‑120 (MQ=255) tCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCa < 8:43200/120‑1 (MQ=255) gcgGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACGACTCACGCCGCGCACCCTATTGGTGCGACACGATGAAAAAACGCATCGTAAGGGTGCACTTTCAccc > 5:30602/1‑149 (MQ=255) ggTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGACCC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGc > 5:338126/1‑148 (MQ=255) aCCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAAcc > 1:123281/1‑148 (MQ=255) ccGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCaa > 7:129009/1‑149 (MQ=37) ccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCGGGGCACCCCACTCCCGCCACGCCCCCTATTGGTGCGCCACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTACCCCa > 1:131698/1‑149 (MQ=255) ccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCCCTTTCACCCGCTAACCCaa > 3:334281/1‑149 (MQ=255) ccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCCCCCGCTAACCCaa > 7:273134/1‑149 (MQ=255) cgcgCCTACAGGCGTTGAAAAGCCCGTCGGCGCGGTTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc < 4:21656/149‑1 (MQ=255) gcgcCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAgg < 5:407801/123‑1 (MQ=255) gcgcCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAgg > 6:407801/1‑123 (MQ=255) gcgcCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACg < 8:311661/149‑1 (MQ=255) gcgcCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACg > 4:376190/1‑149 (MQ=255) cTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc < 6:366659/144‑1 (MQ=255) cTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 5:366659/1‑144 (MQ=255) cTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCa > 4:50879/1‑148 (MQ=255) aCAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAAt > 7:211821/1‑149 (MQ=255) cAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAAt < 6:422089/148‑1 (MQ=255) aGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGc > 1:194450/1‑149 (MQ=255) gCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCAc < 5:209025/149‑1 (MQ=255) | GCCTGCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCT‑TTGAGATAAATGCAGAGGCCAGGTTTTGCA‑GCGCCTGTTCCGGCCCTTTCGCGGGTA‑AACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACC‑TGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCAC > NC_002947/5751583‑5751875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |