| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,788,719 | T→A | 5.0% | H17L (CAC→CTC) | ynfL ← | DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,788,719 | 0 | T | A | 5.0% | 248.4 / 2.1 | 79 | H17L (CAC→CTC) | ynfL | DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (39/36); new base A (2/2); total (41/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
TCGAGGAACAATCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCATTGCGCCAG > NC_002947/5788572‑5788864 | tCGAGGAACAATCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTg > 7:311368/1‑149 (MQ=255) gAACAATCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGct < 4:426828/149‑1 (MQ=255) gAACAATCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGct < 3:13684/149‑1 (MQ=255) gAACAATCGCCAGGCCTAGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCAAACTAATTCTCCAGAGACTGTATCTGCTGACTCAAGGGCGGTTGTT‑AAATACACAGCTGCTGGGCGGCGCGGCCAAAGagcagc > 2:340639/1‑148 (MQ=255) aTCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCAAACTCCTGCTCCAGAGCGTGGATCTGCTGACTCAAGGCCGGTTGGG‑AAATACCCAGCTCCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCg > 6:184193/1‑149 (MQ=255) tCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCgg < 5:63492/149‑1 (MQ=255) cccGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCca < 5:48199/149‑1 (MQ=255) cccGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAACTCCAGCTCTACGGCca > 5:438122/1‑149 (MQ=255) ccTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGc > 6:181201/1‑148 (MQ=255) tCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAAt > 3:410942/1‑149 (MQ=255) tCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAAt > 3:219791/1‑149 (MQ=255) cTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGaa < 8:256547/149‑1 (MQ=255) cTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGaa < 3:159592/149‑1 (MQ=255) cTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGaa < 3:84439/149‑1 (MQ=255) aGTTCGACACGACTCTTGCTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAg < 4:302406/147‑1 (MQ=255) tCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACg > 7:218717/1‑149 (MQ=255) gACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAAt < 6:341500/138‑1 (MQ=255) gACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAAt > 5:341500/1‑138 (MQ=255) gACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGc < 6:11536/148‑1 (MQ=255) acgacgATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGAt < 8:218717/149‑1 (MQ=255) gacgaTTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGaa < 7:398652/136‑1 (MQ=255) gacgaTTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGaa > 8:398652/1‑136 (MQ=255) tGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGt > 2:300059/1‑149 (MQ=255) gTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGtt < 6:354647/148‑1 (MQ=255) gTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTc > 2:240335/1‑149 (MQ=255) gAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGcc > 5:32492/1‑149 (MQ=255) ccGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTcc > 8:276567/1‑148 (MQ=255) cGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCaa < 1:240335/149‑1 (MQ=255) gtcccccAACTCCTGATACAGAGCCTTTATCTGCTGACTCAATGGCGGTTGGG‑AAATACCCAGCTGCTTGGCGTCGCTTCCAAAGTGAATCTCTTCGGCCACAGCAATGAAGTAACGCCGATGACGCAGTTCCATGAGCCGCTCCAATc < 1:340639/147‑1 (MQ=255) cccccAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGGTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCaa < 4:327679/149‑1 (MQ=255) cccccAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCaa < 3:168890/149‑1 (MQ=255) cccAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGt > 4:218166/1‑149 (MQ=255) cccAACTCCTGCTCCAGAGACTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAACTGCAGCTCTTCGGCCACAGCAAAGAAGTAACGCAGCTGACGCAGTTCCATGAGCCGCTCCAATCAAGt > 5:325540/1‑149 (MQ=255) ccAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTc < 7:276567/149‑1 (MQ=255) cTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCTGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACa < 6:322788/147‑1 (MQ=255) cAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGGAAAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGATCTTCGCCAACAGAAATCAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCAAATCAATTCTTAAAACAtct > 1:72584/1‑148 (MQ=255) cAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTACATGAGCCGCTCCAATCAAGTCGTAAAACAtctc > 5:364991/1‑148 (MQ=255) agCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAAt < 5:181201/149‑1 (MQ=255) cTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAgg > 4:37619/1‑149 (MQ=255) ggATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTc > 1:16007/1‑149 (MQ=255) gATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTc > 3:152057/1‑148 (MQ=255) gctgACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACaa > 2:119638/1‑149 (MQ=255) ctgACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACaa > 1:240032/1‑148 (MQ=255) aCTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAatata > 2:237399/1‑149 (MQ=255) aCTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGAAGTTCCATGAGCCGCGCCAATCAAATCGTAAAACATCTCAAAAACGTCGAACAatata > 6:409850/1‑149 (MQ=255) gcacgggCGGTTCGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAACGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGCGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATAtt < 4:219791/145‑1 (MQ=255) aatggCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGTCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGCAAAACATCTCAAATAGGTCGAACAATATATTgg < 4:31938/146‑1 (MQ=255) aaGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAAc > 4:53898/1‑121 (MQ=255) aaGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAAc < 3:53898/121‑1 (MQ=255) aaGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTg > 4:379243/1‑148 (MQ=255) gggCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGAt < 3:218166/149‑1 (MQ=255) gg‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATATCAAATATGTCGAACAATATATTGGATCTAATCGtt > 4:230332/1‑149 (MQ=255) g‑AAATACCCCTCTGCTGGGCGGCGCGTCCAAAGTGTAGCTCTTCGGCCACATCAATGAATTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATGAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGTATCTAATCGTTa < 8:410790/149‑1 (MQ=255) aaaTACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCATCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAg < 3:320054/149‑1 (MQ=255) aaTACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGc < 3:37619/149‑1 (MQ=255) ccAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACaa > 8:96188/1‑122 (MQ=255) ccAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACaa > 8:102084/1‑122 (MQ=255) ccAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACaa < 7:96188/122‑1 (MQ=255) ccAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACaa < 7:102084/122‑1 (MQ=255) ccAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGc > 8:227206/1‑148 (MQ=255) ccAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACAACTAAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGc > 8:175682/1‑148 (MQ=255) ctgGGCGGCGCGGCCAAATTGCAGCTCTTCGGCCAAAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTatat < 5:207501/146‑1 (MQ=255) ggcggcGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCtt < 3:379243/147‑1 (MQ=255) gcggcgcggcCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCttttt > 1:366233/1‑149 (MQ=255) tgtggcCGAAGAGCTGCACTTTGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTatat > 5:364215/4‑138 (MQ=255) tgtggcCGAAGAGCTGCACTTTGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTatat < 6:364215/135‑1 (MQ=255) tgtggcCGAAGAGCTGCACTTTGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTatat < 1:419246/135‑1 (MQ=255) tgtggcCGAAGAGCTGCACTTTGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTatat > 2:419246/4‑138 (MQ=255) gcgtcCAATGTGCAGCTCTTCGGCCCCAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTGCAATCAAGTCGTAAAACATCTCATATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCAtt < 6:325540/149‑1 (MQ=255) gcggcCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCAtt > 8:66423/1‑149 (MQ=255) gcCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAgg < 3:84994/95‑1 (MQ=255) gcCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAgg > 4:84994/1‑95 (MQ=255) gcCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCATTgcg > 3:154029/1‑149 (MQ=255) cAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCATTgcgc > 7:204741/1‑148 (MQ=255) aaaGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAAGATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATCCttttt < 1:75200/138‑1 (MQ=255) aaaGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAAAATAATGGATCTAAACGTTAGCCAGCTAAATACttatt > 2:75200/1‑138 (MQ=255) aaGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCAt > 3:65290/1‑141 (MQ=255) aaGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCAt < 4:65290/141‑1 (MQ=255) aaGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCATTGCGCCag < 6:32492/149‑1 (MQ=255) aGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCATTgcgc > 4:292245/1‑145 (MQ=255) | TCGAGGAACAATCGCCCGGCCTCGCTCAGTTCGACACGACGATTGGTACGGTCGAACAACCGGGCCCCCAACTCCTGCTCCAGAGCCTGGATCTGCTGACTCAAGGGCGGTTGGG‑AAATACCCAGCTGCTGGGCGGCGCGGCCAAAGTGCAGCTCTTCGGCCACAGCAATGAAGTAACGCAGATGACGCAGTTCCATGAGCCGCTCCAATCAAGTCGTAAAACATCTCAAATAGGTCGAACAATATATTGGATCTAATCGTTAGCCAGCTATATGCTTTTTTCATTGCGCCAG > NC_002947/5788572‑5788864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |