| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,798,206 | A→G | 5.1% | intergenic (‑307/+67) | gltB ← / ← PP_5077 | L‑glutamate synthase subunit alpha/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,798,206 | 0 | A | G | 5.1% | 289.7 / 3.9 | 97 | intergenic (‑307/+67) | gltB/PP_5077 | L‑glutamate synthase subunit alpha/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (47/45); new base G (2/3); total (49/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.13e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
ATTGAAAATTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTGGCAAG > NC_002947/5798058‑5798354 | aTTGAAAATTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCgca < 8:116621/149‑1 (MQ=255) aaaaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGGAACTAAGGGCTTGTGGCCGGCAGTCCGGGGACAGAAAAGCCTGCCGCGCTCGGGCgcagc < 1:40715/148‑1 (MQ=255) aaaaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCTGCGCCCGAGCGcggcag < 2:342423/149‑1 (MQ=255) aaaaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGcagcag > 6:383276/1‑149 (MQ=255) aaaaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGcagcag < 6:350005/149‑1 (MQ=255) aaaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCTGCGCCCGAGCGCGGCAgg < 6:179095/149‑1 (MQ=255) aaaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAgg > 8:215606/1‑149 (MQ=255) aaTTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGc > 5:48490/1‑149 (MQ=255) tATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGt > 3:5068/1‑149 (MQ=255) aTGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTGGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCTGCGCCCGAGCGCGGCAGGCtttt < 5:261275/148‑4 (MQ=255) gTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCg > 2:339597/1‑148 (MQ=255) tCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGa > 6:295194/1‑148 (MQ=255) cGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGa > 4:424704/1‑147 (MQ=255) gCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAg > 6:44486/1‑149 (MQ=255) gCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAg > 4:82086/1‑149 (MQ=255) cAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGc > 3:402875/1‑149 (MQ=255) aTTTTGAATGTTTTTGCGCGATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTa < 6:104296/149‑1 (MQ=255) aTTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTa < 7:352613/149‑1 (MQ=255) aTTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTa < 4:274275/149‑1 (MQ=255) gTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCt > 6:105696/1‑149 (MQ=255) tttttGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCtt < 4:194511/149‑1 (MQ=255) tttGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTa < 6:48490/148‑1 (MQ=255) ttGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAg < 7:9348/148‑1 (MQ=255) ttGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAg < 5:295194/148‑1 (MQ=255) gcgcCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTa > 2:191973/1‑149 (MQ=255) ccATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAg < 7:300117/132‑1 (MQ=255) ccATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAg > 8:300117/1‑132 (MQ=255) ccATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTg < 3:99925/149‑1 (MQ=255) cATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCgcagca > 5:76834/1‑114 (MQ=255) cATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTgg > 7:355102/1‑149 (MQ=255) cATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTgg > 1:70651/1‑149 (MQ=255) cATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTgg < 1:339597/149‑1 (MQ=255) aTGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTggg > 6:33492/1‑149 (MQ=255) gcCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGggcggc > 8:171876/1‑149 (MQ=255) gcCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCAGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTGGCTTAGCTACTGggcggc > 4:274601/1‑149 (MQ=255) cGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGcggcgg < 2:70651/149‑1 (MQ=255) gTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCggg < 4:293154/149‑1 (MQ=255) ggCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATgcc > 4:397226/1‑149 (MQ=255) gCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCg < 5:105696/148‑1 (MQ=255) cTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGccc > 8:361508/1‑146 (MQ=255) cTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGccc < 7:361508/146‑1 (MQ=255) cTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCgg > 7:170504/1‑148 (MQ=255) tCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCgg > 7:404067/1‑147 (MQ=255) tCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGaa < 5:383276/149‑1 (MQ=255) gAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGaa < 5:44486/147‑1 (MQ=255) gAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAg < 4:5068/148‑1 (MQ=255) ggcTGAAGCGGTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTa < 8:326874/147‑1 (MQ=255) tGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTa > 6:316548/1‑99 (MQ=255) tGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTa < 5:316548/99‑1 (MQ=255) tGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTAt > 3:182362/1‑147 (MQ=255) gAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCa < 4:182362/148‑1 (MQ=255) gAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAg > 1:356069/1‑149 (MQ=255) aaGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGc > 3:22907/1‑149 (MQ=255) gCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCgg < 3:37717/149‑1 (MQ=255) gCGTTTCAGCCATGACTGCAACTAAGGGCATGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCgg > 1:255104/1‑149 (MQ=255) tttCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGcc > 5:234131/1‑149 (MQ=255) tCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑Gt > 8:380583/1‑149 (MQ=255) ccATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGcc < 6:146054/149‑1 (MQ=255) cATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGc > 7:264979/1‑147 (MQ=255) cATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCa < 2:352176/149‑1 (MQ=255) tGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGc > 2:83307/1‑149 (MQ=255) tGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCtt > 4:47756/1‑149 (MQ=255) cAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCtt < 8:355102/147‑1 (MQ=255) aaCTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCttgtt > 4:95056/1‑149 (MQ=255) aaCTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCttgtt < 2:356069/149‑1 (MQ=255) aCTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCttgttg < 6:353816/149‑1 (MQ=255) cTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGc < 5:27238/140‑1 (MQ=255) cTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGc > 6:27238/1‑140 (MQ=255) tAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCGCGGAAGGTATCAGCGGGCC‑GTGGcc > 2:331860/1‑136 (MQ=255) tAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTCAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGcc < 1:331860/136‑1 (MQ=255) aGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGAc < 8:170504/148‑1 (MQ=255) aGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACg < 7:171876/149‑1 (MQ=255) gggCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACg > 4:412538/1‑148 (MQ=255) gCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCttgt > 3:130366/1‑140 (MQ=255) gCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCttgt < 4:130366/140‑1 (MQ=255) cTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGc < 6:234131/149‑1 (MQ=255) gCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACgg > 3:227975/1‑149 (MQ=255) gCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGCGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCA‑GTGGCCAGCTCTTGTTGGACGCTGCCGAccg > 8:192533/1‑147 (MQ=255) aGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTg < 7:215606/149‑1 (MQ=255) ggACATAAAAGCCTGCCGCGCGCGGGCGCAGCAGGCTATTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTTATGCCGCCCGGAAGGTATCAGCGGGCCAGTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCaa < 1:83307/149‑1 (MQ=255) gACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAgg < 3:47756/149‑1 (MQ=255) aCAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGt < 3:412538/149‑1 (MQ=255) aaaaGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTAc > 1:249433/1‑149 (MQ=255) aaaaGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTAc > 3:426911/1‑149 (MQ=255) aaaaGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTAc > 4:151921/1‑149 (MQ=255) aaaaGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTAc > 5:312509/1‑149 (MQ=255) gCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGc > 2:426946/1‑149 (MQ=255) ccTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGcc > 1:327996/1‑149 (MQ=255) ctgctgCGCCCGAGCGCGGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACACTGCCGACGGTACGTGGCCAAGGTTTACCAGCCt > 8:262214/1‑149 (MQ=255) cTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCt < 2:255104/149‑1 (MQ=255) tgctgcGCCCGAGCGCGGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTg > 7:180415/1‑149 (MQ=255) ccGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTgg < 3:82086/148‑1 (MQ=255) cgcTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCt < 3:274601/149‑1 (MQ=255) tagggCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGAGGCGGGGTGATGACGCCAGGAAGGTATCAGAGGGCC‑GTGGCCAGCTCTTGTTGGCCGCTGACGACGGGACGTGGCCAAGGTTTACCAGCCTGGACCTTCg > 6:243540/3‑149 (MQ=255) gggCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCt > 7:232281/1‑149 (MQ=255) agcgcGGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTg < 8:180415/148‑1 (MQ=255) gctcagcagGCTAGTCGAAAGGTAGAATTCGCTTAGCTACTGGGCGGCGGGGGTATGCCGCCCGTAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTgg < 7:192533/146‑1 (MQ=255) gcgcAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTgg > 1:298553/1‑149 (MQ=255) agcagGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTGGCAAg < 6:312509/149‑1 (MQ=255) agcagGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTGGCAAg > 1:394751/1‑149 (MQ=255) | ATTGAAAATTTATGTCGCAATTTTGAATGTTTTTGCGCCATGCGCCGTGATAGCGGCTTGGCTCGAGTCTGAAGCGTTTCAGCCATGACTGCAACTAAGGGCTTGTGGCCGGCAGTCC‑GGGACAGAAAAGCCTGCCGCGCTCGGGCGCAGCAGGCTAGTCGAAAGCTAGAATTCGCTTAGCTACTGGGCGGCGGGGTGATGCCGCCCGGAAGGTATCAGCGGGCC‑GTGGCCAGCTCTTGTTGGACGCTGCCGACGGTACGTGGCCAAGGTTTACCAGCCTGGACCTTCGCTGGCAAG > NC_002947/5798058‑5798354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |