| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,871,628 | A→G | 6.0% | L342P (CTC→CCC) | ptsP ← | phosphoenolpyruvate‑dependent regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,871,628 | 0 | A | G | 6.0% | 290.4 / 6.3 | 99 | L342P (CTC→CCC) | ptsP | phosphoenolpyruvate‑dependent regulator |
| Reads supporting (aligned to +/- strand): ref base A (42/51); new base G (2/4); total (44/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.09e-01 | |||||||||||
CAATACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAGTCGTCGTCC > NC_002947/5871482‑5871774 | cAATAACGTCGACCTTGGAGTATGGCAGGTCGACCAGGAACATCACCTTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGATCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAg < 4:129022/148‑1 (MQ=255) aaTACCGTCGACCTTGGAGTCTGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCTGACCAGCTTGCCTTCCGGCACTTCACCGAGc < 8:279044/148‑1 (MQ=255) aCCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATgg > 6:305862/1‑149 (MQ=255) ccGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCAGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGc > 1:351416/1‑149 (MQ=255) tCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCgg > 3:7392/1‑149 (MQ=255) tCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCgg > 5:246911/1‑149 (MQ=255) cGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgt > 2:203460/1‑149 (MQ=255) gACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGGCCATGCTCGgtg < 6:268515/149‑1 (MQ=255) gACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCg < 2:49507/146‑1 (MQ=255) gACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCg > 1:49507/1‑146 (MQ=255) gACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgtg < 1:122217/149‑1 (MQ=255) ccTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgtgt > 5:335890/1‑148 (MQ=255) cTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgtgt > 5:283573/1‑147 (MQ=255) cTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgtgt > 4:90219/1‑147 (MQ=255) cTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCa < 3:163671/149‑1 (MQ=255) cTTGGAGGATGTCAGGTCGACCAGGCCCATCACCGTGGGTATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCa < 3:247842/149‑1 (MQ=255) ggAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGGCCATGCTCGgtgaagt < 1:30041/147‑5 (MQ=255) ggAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGtt > 2:252844/1‑149 (MQ=255) gAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGGCCATGCTCGgtgaagtgc < 2:401980/148‑7 (MQ=255) gAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTc < 3:345709/149‑1 (MQ=255) gAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTc < 4:209126/149‑1 (MQ=255) gAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTc < 1:105373/149‑1 (MQ=255) gTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCt < 5:110146/149‑1 (MQ=255) ctccaaGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCAAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCa < 2:19820/144‑1 (MQ=255) tGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCAc < 5:305862/149‑1 (MQ=255) aGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGAc < 7:36011/149‑1 (MQ=255) gTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCa < 1:203460/149‑1 (MQ=255) tCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAg > 7:218199/1‑149 (MQ=255) gACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGa < 4:56214/149‑1 (MQ=255) ccAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATg > 5:343519/1‑119 (MQ=255) ccAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATg < 6:343519/119‑1 (MQ=255) ccAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATg < 6:335890/149‑1 (MQ=255) aGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGgt < 6:256239/149‑1 (MQ=255) ggCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCa < 2:385057/126‑1 (MQ=255) ggCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCa > 1:385057/1‑126 (MQ=255) cATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATCGCCGGTGTCAGTTCCTCACTGACCAGGATGGtgttgt > 2:404227/1‑149 (MQ=255) aTCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTc < 3:90219/149‑1 (MQ=255) aCCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCgg < 8:58046/148‑1 (MQ=255) aCCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGc < 3:17710/149‑1 (MQ=255) cGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCa > 7:155707/1‑148 (MQ=255) gATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATacac > 1:100191/1‑147 (MQ=255) aTGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAg > 5:322729/1‑149 (MQ=255) cccATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGa > 5:225113/1‑149 (MQ=255) cATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACt < 6:246911/149‑1 (MQ=255) tGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGc < 6:322729/149‑1 (MQ=255) ggCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGc > 6:197660/1‑148 (MQ=255) gCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACtcc > 8:248763/1‑145 (MQ=255) aGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTc < 3:423727/149‑1 (MQ=255) ggATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGATGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTc > 1:78654/1‑149 (MQ=255) aTGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTg > 5:93825/1‑149 (MQ=255) aTGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTg < 2:129762/149‑1 (MQ=255) gCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAg < 3:39991/149‑1 (MQ=255) gCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAg < 3:157949/149‑1 (MQ=255) aCATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCAGGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTa < 6:393320/149‑1 (MQ=255) tGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGc < 6:283573/149‑1 (MQ=255) gAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGTCCa > 5:219444/1‑148 (MQ=255) cccGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCGCTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAggcg > 5:137830/1‑149 (MQ=255) cccGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACAACAGCGACTGCGAGCGCGCTTCCTGCA‑GTAGGCCAAAAggcgg > 7:109943/1‑149 (MQ=255) ccgagcctagTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAggcgg < 1:403771/149‑1 (MQ=255) ccgagccgagTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAggcgg < 8:218199/149‑1 (MQ=255) gccgagTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGGCGGCATACACCAGCGACTGCGAGCGCGATTCCTGCAGGTAGGCCAAAAGGCGGCGcc < 1:252844/149‑1 (MQ=255) gagTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGccc > 7:100438/1‑147 (MQ=255) gagTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGccc > 1:225606/1‑147 (MQ=255) agTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAg < 2:220348/149‑1 (MQ=255) agTACCGA‑GACCAGGCCGAACAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCAGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCAAAAAGGCGGCGCCCCAg > 1:114813/1‑149 (MQ=255) gTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAgg > 4:226893/1‑149 (MQ=255) cGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGccc < 6:298432/141‑1 (MQ=255) cGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGccc > 5:298432/1‑141 (MQ=255) cGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCt > 3:360055/1‑149 (MQ=255) cGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCt > 3:301690/1‑149 (MQ=255) cGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCt > 5:123169/1‑149 (MQ=255) ga‑gaCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCtt < 2:351416/149‑1 (MQ=255) ga‑gaCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCtt < 1:404227/149‑1 (MQ=255) a‑gaCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCTCTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTg < 6:137830/149‑1 (MQ=255) aCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGAc < 3:293580/149‑1 (MQ=255) aCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGAc < 8:100438/149‑1 (MQ=255) aCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGAc < 5:197660/149‑1 (MQ=255) cAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAgcgcgc < 3:276141/105‑1 (MQ=255) cAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAgcgcgc > 4:276141/1‑105 (MQ=255) cAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCt < 3:2409/110‑1 (MQ=255) cAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCt > 4:2409/1‑110 (MQ=255) aGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTc > 3:267309/1‑149 (MQ=255) gCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCg > 7:331699/1‑148 (MQ=255) ccGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGa < 8:155707/149‑1 (MQ=255) ctaCCATCTTTCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTTGGGCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAg < 5:204584/147‑1 (MQ=255) aCCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGc < 2:100191/149‑1 (MQ=255) tGCCTTCCGGCACTTCACCGGGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCa < 8:47288/143‑1 (MQ=255) tGCCTTCCGGCACTTCACCGGGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCa > 7:47288/1‑143 (MQ=255) cTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACg > 2:16380/1‑148 (MQ=255) cGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAgg > 6:23112/1‑148 (MQ=255) ggCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAgg > 5:438132/1‑147 (MQ=255) gCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAg > 5:21602/1‑149 (MQ=255) aactgacACCGGCCATGCTCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAg > 5:249695/7‑149 (MQ=255) ttCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCtt > 4:288565/1‑117 (MQ=255) ttCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCtt < 3:288565/117‑1 (MQ=255) cACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAgtcgtc < 4:301690/148‑1 (MQ=255) cACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAgtcgtc < 3:237558/148‑1 (MQ=255) ccGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAgtcgtcgtc < 6:219444/149‑1 (MQ=255) cGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAGTCGTCGTcc < 2:225606/149‑1 (MQ=255) | CAATACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGA‑GACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGTTGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAGTCGTCGTCC > NC_002947/5871482‑5871774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |