Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,903,164 G→T 12.8% intergenic (‑128/‑140) PP_5175 ← / → PP_5176 HlyD family secretion protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,903,1640GT12.8% 130.0 / 8.4 58intergenic (‑128/‑140)PP_5175/PP_5176HlyD family secretion protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (20/29);  new base T (4/4);  total (25/33)
Fisher's exact test for biased strand distribution p-value = 7.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01

AGCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCACC  >  NC_002947/5903017‑5903311
                                                                                                                                                      |                                                                                                                                                    
cgCGGACGCATCCACGCCATGCTGGCTCCTTGCTTGGGCACAAATGATTTGTGGGATGCGACTGTGCGCGTAGTTCAGGGTTCGATAAACATCCCTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGa                                                                                                                                                     <  6:79312/148‑1 (MQ=255)
 gCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAg                                                                                                                                                    <  1:181019/149‑1 (MQ=255)
  cGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAg                                                                                                                                                    <  3:56042/148‑1 (MQ=255)
  cGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAg                                                                                                                                                    >  4:56042/1‑148 (MQ=255)
     aCGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCcg                                                                                                                                                <  8:30563/149‑1 (MQ=255)
         aTCAACGCCCTGCTGGCTCCTTGCTTGTGCACAAATGAGTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCG‑‑CTTCGCGGGCGAGCCCGCGaa                                                                                                                                            <  6:265083/149‑1 (MQ=255)
         aTCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACCTCACTGCCGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGaa                                                                                                                                            <  7:122423/149‑1 (MQ=255)
         aTCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCTCGCCCGCGaa                                                                                                                                            <  5:405460/149‑1 (MQ=255)
         aTCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTACTTCAGGGTTCGATAACCATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGaa                                                                                                                                            <  6:271040/149‑1 (MQ=255)
          tCAACGCCATGCTTGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCTCGCCCGCGAag                                                                                                                                           <  2:291807/149‑1 (MQ=255)
          tCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCTCGCCcgcg                                                                                                                                              >  1:291807/1‑146 (MQ=255)
          tCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCcgc                                                                                                                                               >  4:11432/1‑145 (MQ=255)
          tCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCcgc                                                                                                                                               <  3:11432/145‑1 (MQ=255)
            aaCGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGGGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAagag                                                                                                                                         <  6:426484/149‑1 (MQ=255)
            aaCGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTAGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAagag                                                                                                                                         <  7:333836/149‑1 (MQ=255)
               gCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CATACCCGGCGATCCCGCGAATAGGcc                                                                                                                                      >  2:164634/1‑149 (MQ=255)
                   tGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCG‑‑CTTAGCGGGGGCCGCCGCGAAGATGcggccc                                                                                                                                  >  8:19205/1‑144 (MQ=255)
                        gCTCCTTGCTTGTGCAAAAATGATTTGGGGGATGCGACTGTGAGCGTATTTCCGGGTTCTATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGGGGGGGCCT‑‑CTTCGCGGGCTAGCCCGCTAAGAGGCCTCCACAGcc                                                                                                                             <  2:123840/149‑1 (MQ=255)
                          tCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑AATAGCGGGCCCGCCCCCGAATAGGCCTGCCCAGCCaa                                                                                                                           >  3:14785/1‑148 (MQ=255)
                           ccTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCAGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCAA‑‑CTTAGCGGGCGCCGCCGCGAAGGGGGCACCCCAGGCAt                                                                                                                           >  1:120568/1‑149 (MQ=255)
                                cttgTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATc                                                                                                                      <  4:387479/148‑1 (MQ=255)
                                   gtgCACAAATGATTTGTGCGATGCGAATGTGAGCGTAGTTCAGGGTTAGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGCCCCCGCCAAGAGGCATCCACAGCCATGTAACAGTa                                                                                                                  >  6:337903/1‑149 (MQ=255)
                                                      gATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑AATAGCCGGCGAGCCCGCGAAGAAGCCACCACACCCaa                                                                                                                           >  3:59942/1‑120 (MQ=255)
                                                        ggCGACTGGGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCAGGCGGGAATTTTTGGTGCCTGCGGGGGCCG‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCAt                                                                                            <  7:19205/148‑1 (MQ=255)
                                                          ctaccgtgAGCTGAGTTCCGGGCTCGATAAACATCACTGCCGGCGGCCAGGCTGGCATTTTGGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCAt                                                                                            <  6:337830/142‑1 (MQ=255)
                                                          cGACTTGGAGCGTAGTGCTGGGTGCTATAAACATCACTGACGGGGGCCATGCTGGAATTTTTGGTGCCGGGGGGGGCCT‑‑CTTCGCGGGCTAGCCCGCTAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATc                                                                                           <  8:59736/148‑1 (MQ=255)
                                                                tgAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑ATTAGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCAAGTATAAGTATATTCCAAATACAGAAAACATAAGGCaaa                                                                                    >  4:126660/1‑147 (MQ=255)
                                                                   gCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCCCAGCCATTTTTCAGTATATGCCAAATACCGAAACCATCCGGCAGCGGc                                                                                 >  8:403561/1‑149 (MQ=255)
                                                                            aGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCg                                                                         <  1:93878/148‑1 (MQ=255)
                                                                            aGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CATCGCGGGCGCGCCCGCGAAGAGGCCGCCACAGCCATGTATCAGTATCGGCCATATCCAGAAACAATCAGGCCTCCTCCATccccct                                                                        >  8:307002/1‑147 (MQ=255)
                                                                            aGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCAGTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGCGCCCGCGAAGAGGCCTCCCCCGCCATGTTAACCTATCAGCCAGAACCACAACCCAACAGTCAACGGCCCTCCCCg                                                                         >  8:301247/1‑148 (MQ=255)
                                                                              ggTTCTATAAACATCACTGACGGTGGCCATGCTGGCATTTTTGGTGCCTGCGGGTGCCT‑‑CTTCGCGGGCGAGCCCGCTAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTc                                                                      <  7:183564/149‑1 (MQ=255)
                                                                               gTTCGATAAACATAACTGACGGGGGCCATTCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTcc                                                                     <  2:120568/149‑1 (MQ=255)
                                                                                    gATAACCATCACTGACGGGGGCCAGGCGGGCATTTTTGGTGGCGGCGGGGGCCT‑‑CTTCGCGGGCGTGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAAcc                                                                 <  1:376977/149‑1 (MQ=255)
                                                                                        aaCATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTGACTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGc                                                               >  1:326979/1‑149 (MQ=255)
                                                                                                     ggggCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGa                                                <  2:48867/149‑1 (MQ=255)
                                                                                                     ggggCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGa                                                <  3:126660/149‑1 (MQ=255)
                                                                                                              cTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACAt                                       <  6:147630/149‑1 (MQ=255)
                                                                                                                  cttttttGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCGGCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa                                   <  5:337903/147‑1 (MQ=255)
                                                                                                                  cATTTTTGGTGCCTGCGGGGGCCG‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa                                   <  4:14785/149‑1 (MQ=255)
                                                                                                                  cATTTTTGGGGCCTGCGGGGGCGT‑‑CTTCGCGGGCGAGCCGGGGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa                                   <  1:164634/149‑1 (MQ=255)
                                                                                                                             ccggCGGGGGCCT‑‑CTTCGCCGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCaaa                        <  6:200794/146‑1 (MQ=255)
                                                                                                                              atGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCACCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCaaaa                       <  7:47130/148‑1 (MQ=255)
                                                                                                                                        ct‑‑ctTCGCTGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGc             <  7:307002/149‑1 (MQ=255)
                                                                                                                                        ct‑‑ctTCGCGGGCTCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGc             >  7:61963/1‑149 (MQ=255)
                                                                                                                                        ct‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGGAAACCATCAGGCATCGGCCATCCCCGTTCCCACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAg              >  1:131260/1‑149 (MQ=255)
                                                                                                                                        ct‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGc             >  6:365703/1‑149 (MQ=255)
                                                                                                                                        ct‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGc             >  8:141126/1‑149 (MQ=255)
                                                                                                                                        ct‑‑ctGCGCGGGCGAGCCCGCGAAGAGGCCGCCACAGCCATGTATCAGTATATGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGc             <  7:301247/149‑1 (MQ=255)
                                                                                                                                         t‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAAcc                                                                 <  7:69638/96‑1 (MQ=255)
                                                                                                                                         t‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAAcc                                                                 >  8:69638/1‑96 (MQ=255)
                                                                                                                                         t‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGcc            >  4:334291/1‑149 (MQ=255)
                                                                                                                                         t‑‑ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGcc            >  3:287818/1‑149 (MQ=255)
                                                                                                                                            ctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGcc            >  4:122836/1‑148 (MQ=255)
                                                                                                                                             ttCGCGGGCTCGCCCGCGAAGAGGCCTACACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg           >  1:238630/1‑148 (MQ=255)
                                                                                                                                             ttCGCGGGCTCGCCCGCGAAGAGGCCCCCGCAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCCCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg           >  2:18629/1‑148 (MQ=255)
                                                                                                                                             ttCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAGCCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg           >  8:400197/1‑148 (MQ=255)
                                                                                                                                                  gggCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa                                   <  8:28544/119‑1 (MQ=255)
                                                                                                                                                      gAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCAcc  >  3:199977/1‑148 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
AGCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCT‑‑CTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGGCCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCACC  >  NC_002947/5903017‑5903311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: