| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 513,469 | C→A | 7.9% | intergenic (‑116/‑75) | crp ← / → yhfA | DNA‑binding transcriptional dual regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 513,469 | 0 | C | A | 7.9% | 217.5 / 4.9 | 70 | intergenic (‑116/‑75) | crp/yhfA | DNA‑binding transcriptional dual regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (31/33); new base A (2/4); total (33/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
TTTATCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATGTCGTCG > NC_002947/513322‑513613 | tttATCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑aca > 1:143523/1‑149 (MQ=255) ttGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ac > 3:234887/1‑142 (MQ=255) ttGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ac < 4:234887/142‑1 (MQ=255) ttGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACAtctc > 5:269331/1‑149 (MQ=255) gCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTGTCGGTTTAGTACCG‑AAACATCTCGta < 6:428311/149‑2 (MQ=38) gCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTGTCGGTTTAGTACCG‑AAACATCTCGta < 1:31714/149‑2 (MQ=38) gggCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTcc < 3:92079/149‑1 (MQ=255) gggCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTc < 4:381936/148‑1 (MQ=255) gggCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTc < 1:387709/148‑1 (MQ=255) ggCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTcc > 5:332616/1‑148 (MQ=255) gCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCca > 2:65608/1‑149 (MQ=255) gAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAg < 1:105736/149‑1 (MQ=255) aaCCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGca > 6:381581/1‑149 (MQ=255) cATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACaa < 7:348853/149‑1 (MQ=255) cATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACaa < 3:288439/149‑1 (MQ=255) aTCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAg < 6:332616/149‑1 (MQ=255) tCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAgg > 6:420289/1‑149 (MQ=255) aCGAAATCCTTTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGAACACATCTCGTGCTTTTCCCACAGCCGCACAAGGt < 1:65608/149‑1 (MQ=255) aCGAAATCCTGTTCGATATTACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGt < 4:252841/148‑1 (MQ=255) gAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAg > 3:93292/1‑144 (MQ=255) gAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAg < 4:93292/144‑1 (MQ=255) gAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCt > 4:44264/1‑148 (MQ=255) aaTCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCt > 4:11203/1‑146 (MQ=255) aaTCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAg < 1:422435/149‑1 (MQ=255) tCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCt < 4:210430/149‑1 (MQ=255) tCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCt < 4:324580/149‑1 (MQ=255) cTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTg < 3:11203/148‑1 (MQ=255) cTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGa < 7:165367/149‑1 (MQ=255) tGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGa > 5:209123/1‑148 (MQ=255) tGTTCGATATGACGCATAGGCTTTTTTAAAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATCTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGa > 1:25540/1‑148 (MQ=255) tGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCtttt < 6:166477/148‑1 (MQ=255) gACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTcc > 7:108450/1‑149 (MQ=255) ggCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCa < 3:274604/149‑1 (MQ=255) gCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg < 3:44264/149‑1 (MQ=255) ttttttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg > 3:327683/1‑147 (MQ=255) ttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTcc > 7:22614/1‑149 (MQ=255) gagGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCggg > 8:64342/1‑149 (MQ=255) gTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAACTCAGGAGTCCgcg > 2:215073/1‑144 (MQ=255) ggAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCAc > 7:123584/1‑149 (MQ=255) agagCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTACGAAAATCAGGAGTCAGGGTAGATGAAGGCACg > 7:283574/1‑148 (MQ=255) gagCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTa > 6:265698/1‑149 (MQ=255) gcCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCa < 1:155698/149‑1 (MQ=255) gcCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAAACG‑AAACATATCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACACTTTTCCGAAAATCAGGAGTCAGGGTAGATGAAGGCACGTAta > 6:264590/1‑146 (MQ=255) ccAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAg > 2:48199/1‑149 (MQ=255) aGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTg < 8:22614/149‑1 (MQ=255) aGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTg > 3:188683/1‑149 (MQ=255) tttGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCg < 5:381581/149‑1 (MQ=255) ggCGCCAGCTTATCAGACAATACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGt < 4:204804/148‑1 (MQ=255) ccAGCTTATCCGACACTACGCGATGTGTCGGTACTAAACCT‑ACACATCTCGTGCTGTTCCCACAGCCGCACAAGGTCTAAGCTTACACGCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGc < 4:286313/149‑1 (MQ=255) cTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑AAACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCTGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATg < 3:128167/149‑1 (MQ=255) aTCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGt < 2:143523/147‑1 (MQ=255) tCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTc < 2:294136/148‑1 (MQ=255) aGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTc < 8:123584/149‑1 (MQ=255) agcaCGAGATGTGTCGGTTTAGTACCG‑AAACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGAt > 2:104896/4‑105 (MQ=25) agcaCGAGATGTGTCGGTTTAGTACCG‑AAACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGAt < 1:104896/102‑1 (MQ=25) tACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCAGAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCAAGTGGGCAGGTGAGGCAATGTTCCTCGGCGaa > 6:305123/1‑149 (MQ=255) tACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGac > 4:273527/1‑148 (MQ=255) tACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGaa > 2:164244/1‑149 (MQ=255) aCGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg < 2:254330/88‑1 (MQ=255) aCGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg > 1:254330/1‑88 (MQ=255) agaTGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCgg < 1:164244/149‑1 (MQ=255) taTGTTTCGGTACTAAAGCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCggg < 5:265698/148‑1 (MQ=255) ttCGGTACTAACCCG‑ACACATCTCGTGATTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGCAGTCCGGGTACATGAAGGCACGTATCCATTGGGCCGATGATGCAATGTTACTCGGCGAATCGGGGatag > 7:312023/1‑146 (MQ=255) ggTACTAAACCT‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCACGAGACCGGGTAGATCAAGGAACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGTCCAATCGGGCAGCGGc > 2:147923/1‑148 (MQ=255) aCTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGGAGATGAAGGCACGGATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATg > 8:274745/1‑149 (MQ=255) cTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATg < 3:215125/148‑1 (MQ=255) tAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTc < 6:305761/122‑1 (MQ=255) tAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTc > 5:305761/1‑122 (MQ=255) aaaCCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATgtcg > 7:172239/1‑149 (MQ=255) aaCCG‑ACACATGTCGTGCTTTTCCCACAGTCGCAGAATGTCTCTGCTGACACCGTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATgtcg < 1:147923/148‑1 (MQ=255) aCCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAAACGGGGAGCGGCCATgtcgtc < 5:420289/149‑1 (MQ=255) cG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATGtcgtcg > 5:211212/1‑148 (MQ=255) cG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGAGCATCGGGGAGCGGCCATGtcgtcg > 8:231599/1‑148 (MQ=255) | TTTATCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCG‑ACACATCTCGTGCTTTTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATGTCGTCG > NC_002947/513322‑513613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |