Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,077,376 T→C 6.2% E108G (GAG→GGG)  PP_5329 ← phosphate ABC transporter substrate‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,077,3760TC 6.2% 185.4 / 2.3 64E108G (GAG→GGG) PP_5329phosphate ABC transporter substrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base T (31/29);  new base C (2/2);  total (33/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01

GCCACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCCTTCTTGTAGGCCTCGG  >  NC_002947/6077234‑6077523
                                                                                                                                              |                                                                                                                                                   
tccACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGaa                                                                                                                                                 <  4:269816/146‑1 (MQ=255)
gCCACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGaa                                                                                                                                                 <  1:418950/147‑1 (MQ=255)
 ccACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGc                                                                                                                                              >  6:345970/1‑149 (MQ=255)
  cACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCt                                                                                                                                             >  3:50117/1‑149 (MQ=255)
  cACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGACCTTGATTGGGTTCTCCTTGTGCACGAAAAAGGCCAGGGCGTAGACGGCGAACGGGAAGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCt                                                                                                                                             >  2:99714/1‑149 (MQ=255)
   aCCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCtt                                                                                                                                            <  5:345970/149‑1 (MQ=255)
   aCCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCtt                                                                                                                                            >  1:193845/1‑149 (MQ=255)
            gCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCCTACTTCTGCTCGAAGGCTTGCAGCTCGa                                                                                                                                   <  1:248381/149‑1 (MQ=255)
               aGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGt                                                                                                                                >  7:219111/1‑149 (MQ=255)
                 tGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTcc                                                                                                                              <  1:301261/149‑1 (MQ=255)
                 tGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTcc                                                                                                                              <  3:211825/149‑1 (MQ=255)
                   gaggagAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGaa                                                                                                                                                 <  4:66260/128‑1 (MQ=255)
                   gaggagAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGaa                                                                                                                                                 >  3:66260/1‑128 (MQ=255)
                   gaggagAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCtt                                                                                                                            >  3:421834/1‑149 (MQ=255)
                        gaagaTGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCCCGAAGGCTTGCAGCTCGACGTCCTTCATCt                                                                                                                       >  4:326748/1‑149 (MQ=255)
                        gaagaTGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGAGGGCGGTCGGCTTGTAGCCGTACTTCTGCCCGAAGGCTTGCAGCTCGACGTCCTTCATCt                                                                                                                       >  4:320934/1‑149 (MQ=255)
                                 gTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCa                                                                                                              >  6:421309/1‑149 (MQ=255)
                                    gACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCg                                                                                                           <  4:421834/149‑1 (MQ=255)
                                     aCCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTg                                                                                                                     <  5:53694/138‑1 (MQ=255)
                                     aCCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTg                                                                                                                     >  6:53694/1‑138 (MQ=255)
                                       cTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGc                                                                                                        <  8:157175/149‑1 (MQ=255)
                                           gCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAAGACGGCCAGGGCGTCGACTGCGACCGTGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGATTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGa                                                                                                     <  7:59144/148‑1 (MQ=255)
                                                 gTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTgg                                                                                               <  4:189525/148‑1 (MQ=255)
                                                    aGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGt                                                                                           >  1:259680/1‑149 (MQ=255)
                                                    aGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGt                                                                                           >  1:394128/1‑149 (MQ=255)
                                                      gCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGTCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGc                                                                                         >  6:339620/1‑149 (MQ=255)
                                                      gCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGc                                                                                         <  1:360874/149‑1 (MQ=255)
                                                        ccTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGGTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCt                                                                                       >  2:398996/1‑149 (MQ=255)
                                                        ccTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCa                                                                                                                          >  4:98026/1‑114 (MQ=255)
                                                        ccTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCa                                                                                                                          <  3:98026/114‑1 (MQ=255)
                                                        ccTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCt                                                                                       >  5:236716/1‑149 (MQ=255)
                                                            gATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCg                                                                                    <  2:193845/148‑1 (MQ=255)
                                                                         ttGTGCACGAACACGGCCAGGGCGTCGACGGCGGCCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTgg                                                                      >  6:117900/1‑149 (MQ=255)
                                                                             gCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGcgcg                                                                  >  2:244227/1‑149 (MQ=255)
                                                                              cACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCgg                                                                 >  5:393507/1‑149 (MQ=255)
                                                                               aCGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGt                                                                <  1:398996/149‑1 (MQ=255)
                                                                               aCGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCCCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGt                                                                <  3:320934/149‑1 (MQ=255)
                                                                               aCGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCCCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGt                                                                <  3:326748/149‑1 (MQ=255)
                                                                                cGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCTGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGATGTTGGCGGTACCTTCGGTCAGCGCAGGTGGCGCGGTa                                                               <  1:99714/149‑1 (MQ=255)
                                                                                  aaCACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTaga                                                             <  4:7159/149‑1 (MQ=255)
                                                                                   acacGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTagag                                                            <  1:262183/149‑1 (MQ=255)
                                                                                     acGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAgagga                                                          <  1:250616/149‑1 (MQ=255)
                                                                                      cGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAgaggag                                                         <  2:259680/149‑1 (MQ=255)
                                                                                      cGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAgaggag                                                         <  2:394128/149‑1 (MQ=255)
                                                                                         ccAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCg                                                      <  6:236716/149‑1 (MQ=255)
                                                                                                   gACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCctgga                                            >  4:345968/1‑149 (MQ=255)
                                                                                                    aCGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCctggat                                           >  1:74362/1‑149 (MQ=255)
                                                                                                        cGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCGGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCctggatctg                                        >  2:141508/1‑148 (MQ=255)
                                                                                                          aCCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCctggatctggat                                     <  6:393507/149‑1 (MQ=255)
                                                                                                            cGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGt                                   >  5:119160/1‑149 (MQ=255)
                                                                                                              ggATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTTCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGttt                                 <  5:421309/149‑1 (MQ=255)
                                                                                                              ggATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGtt                                  >  8:148200/1‑148 (MQ=255)
                                                                                                              ggATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGtt                                  >  7:134101/1‑148 (MQ=255)
                                                                                                                    cGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTc                           >  5:294412/1‑149 (MQ=255)
                                                                                                                       tCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGa                        <  7:148200/149‑1 (MQ=255)
                                                                                                                            ttGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCTGCCTGGATCTGGATGTTTACGTTCGGATATTc                   >  7:189109/1‑149 (MQ=255)
                                                                                                                               tAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCct                 <  3:271337/148‑1 (MQ=255)
                                                                                                                                  ccGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCcttctt             >  5:407339/1‑149 (MQ=255)
                                                                                                                                    gTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCctt                >  7:398644/1‑144 (MQ=255)
                                                                                                                                    gTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCctt                <  8:398644/144‑1 (MQ=255)
                                                                                                                                     tACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCCTTCTTGTa          <  6:119160/149‑1 (MQ=255)
                                                                                                                                      aCTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCCTTCTTGTAg         >  4:382436/1‑149 (MQ=255)
                                                                                                                                            gCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCGTTCTTGTAGGCCTCg   >  4:304867/1‑149 (MQ=255)
                                                                                                                                             cTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCCTTCTTGTAGGCCTCgg  >  5:133038/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
GCCACCGCACAGGCGAGTGGAGGAGAAGATGGCGTCGACCTGAGCCATGGTCAGGCCCTTGATTGGGTTGTCCTTGTGCACGAACACGGCCAGGGCGTCGACGGCGACCGGGATGGCGGTCGGCTTGTAGCCGTACTTCTGCTCGAAGGCTTGCAGCTCGACGTCCTTCATCTTGCGGCTCATCGGGCCGAGGTTGGCGGTGCCTTCGGTCAGCGCAGGTGGCGCGGTAGAGGAGCCGGCAGCCTGGATCTGGATGTTTACGTTCGGATATTCCTTCTTGTAGGCCTCGG  >  NC_002947/6077234‑6077523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: