| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 516,693 | T→G | 5.2% | E100A (GAA→GCA) ‡ | PP_0429 ← | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 516,693 | 0 | T | G | 5.2% | 426.0 / 11.8 | 134 | E100A (GAA→GCA) ‡ | PP_0429 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (56/71); new base G (4/3); total (60/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
ATCCATGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGC > NC_002947/516546‑516840 | catGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATg > 4:429042/1‑149 (MQ=255) catGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATg > 8:120350/1‑149 (MQ=255) catGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCCTCGGCCCATTCATg < 8:102233/149‑1 (MQ=255) atGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATgg < 7:351219/149‑1 (MQ=255) atGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCAATTCATgg < 7:323193/149‑1 (MQ=255) ccAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAg > 4:68246/1‑149 (MQ=255) ccAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAg > 1:131714/1‑149 (MQ=255) cAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAg > 2:119915/1‑148 (MQ=255) gcCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACgg < 3:267020/149‑1 (MQ=255) gcCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCAT‑GGCCAGGAACGGc < 2:50/149‑1 (MQ=255) ccACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGc < 1:305944/149‑1 (MQ=255) cACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGcc < 4:154106/149‑1 (MQ=255) aCCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGcc > 8:379404/1‑148 (MQ=255) ccccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCa < 1:69777/149‑1 (MQ=255) ccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCa > 2:407941/1‑147 (MQ=255) ccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCa > 1:126467/1‑147 (MQ=255) cGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAg < 7:253690/149‑1 (MQ=255) cGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAg < 5:226772/149‑1 (MQ=255) cGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAg < 2:126467/149‑1 (MQ=255) cAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTgc < 5:339117/149‑1 (MQ=255) aGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTgcg > 3:377122/1‑149 (MQ=255) cGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGccc < 2:124381/149‑1 (MQ=255) ttGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCa < 3:48326/149‑1 (MQ=255) tGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAg > 3:132954/1‑149 (MQ=255) gagaATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAg < 4:316234/148‑1 (MQ=255) agaATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGtt < 7:81629/149‑1 (MQ=255) gaATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGtt > 4:12051/1‑148 (MQ=255) aaTCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGa < 3:128473/149‑1 (MQ=255) ctccccccGCCCCCCTCCACCGCCCTCAGCCTCCCGAGGGCATGGCACAGGCGGCGCAGGGCCAGCACCTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc < 8:331096/144‑1 (MQ=255) aTCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGTGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc < 1:401084/149‑1 (MQ=255) aTCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc < 7:120350/149‑1 (MQ=255) aTCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc > 6:140946/1‑149 (MQ=255) tCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCACATTCATCGGCCAGGAACGGCCCATAGGTCCGCAAGCCCGCGCAGTTGAc > 4:388560/1‑148 (MQ=255) gCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAcc > 1:58904/1‑146 (MQ=255) cccGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAcc < 2:95389/145‑1 (MQ=255) cGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCcgcg < 5:384854/134‑1 (MQ=255) cGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCcgcg > 6:384854/1‑134 (MQ=255) gCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCaaa > 8:85713/1‑148 (MQ=255) ccACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATc < 6:367763/149‑1 (MQ=255) ccACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATc > 1:392076/1‑149 (MQ=255) ccACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATc < 7:379404/149‑1 (MQ=255) aCCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGa < 2:17161/149‑1 (MQ=255) ccTGTACAGCCATCAGGTTACAGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATa < 7:135056/149‑1 (MQ=255) gTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATAcgc > 5:338959/1‑149 (MQ=255) cAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATAcgccg > 7:110215/1‑148 (MQ=255) gCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTc < 3:12051/149‑1 (MQ=255) ccATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCg > 2:281111/1‑149 (MQ=255) aTCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGcc < 4:82480/149‑1 (MQ=255) tCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCct > 4:317510/1‑149 (MQ=255) aGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCctt < 3:150217/148‑1 (MQ=255) gTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCcttcta > 5:235877/1‑148 (MQ=255) gTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCcttc < 6:235877/147‑1 (MQ=255) ttACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCttcttc < 6:307432/149‑1 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATTGGTGCGCAAGCCCGCGCAGTTGCCGCGCAAATCTATACGCCGCGCGCCTTCTTCCAGc > 6:237815/1‑149 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGc > 5:44561/1‑149 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTCTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGc > 3:71425/1‑149 (MQ=255) atggcatggcACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCTGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGctc > 1:306279/1‑149 (MQ=255) tggcatggcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGctct < 5:140946/149‑1 (MQ=255) catggcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCATCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAg > 1:115183/1‑148 (MQ=255) atggcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCCCAAGCCCGCGCAGTTGCCCACCAAATCGATACGCCGCTCCCCTTCTTCCAGCTGTAGCa > 8:336439/1‑149 (MQ=255) tggcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCAc < 3:429042/149‑1 (MQ=255) gcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACg > 5:95609/1‑148 (MQ=255) gcggcTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACGAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCt > 8:223257/1‑148 (MQ=255) cTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAg < 6:44561/149‑1 (MQ=255) tCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAgg > 6:149095/1‑149 (MQ=255) aGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCTATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGgc < 3:37696/148‑1 (MQ=255) gCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAg > 2:361393/1‑149 (MQ=255) ccAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGc < 1:127786/149‑1 (MQ=255) cAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCg < 1:379428/149‑1 (MQ=255) cAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCg > 8:217621/1‑149 (MQ=255) gCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCggc < 3:317510/149‑1 (MQ=255) cACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAg < 4:60224/79‑1 (MQ=255) cACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAg > 3:60224/1‑79 (MQ=255) gTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGcc < 5:222847/129‑1 (MQ=255) gTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGcc > 6:222847/1‑129 (MQ=255) gTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCggctggc > 1:374133/1‑149 (MQ=255) ttGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCggctggct > 1:399023/1‑149 (MQ=255) aCTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGa < 2:303795/148‑1 (MQ=255) cTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAg < 2:374133/148‑1 (MQ=255) ttCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGt > 7:262279/1‑149 (MQ=255) ttCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGt > 1:27296/1‑149 (MQ=255) ttCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGGGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGt > 1:113902/1‑149 (MQ=255) ccAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAg > 4:408126/1‑145 (MQ=255) gcagATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAg < 5:149095/149‑1 (MQ=255) tCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACg > 6:78555/1‑108 (MQ=255) tCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACg < 5:78555/108‑1 (MQ=255) cTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCgg > 6:179834/1‑148 (MQ=255) tGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGaa > 1:210420/1‑149 (MQ=255) gTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGaa > 2:430553/1‑148 (MQ=255) ttCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAAc < 7:85713/148‑1 (MQ=255) ttCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACa < 1:10593/149‑1 (MQ=255) gtcgtcgGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGaa < 8:347582/146‑1 (MQ=255) ttcctggCCCATGAATGGGCCGGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAg > 7:58048/6‑149 (MQ=255) ctggCCCATGAATGGGCCGGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCAc < 3:342059/147‑1 (MQ=255) ctggCCCATGAATGGGCCGGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATAGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCAc > 4:342059/3‑149 (MQ=255) tggCCCATGAATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCTGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCAc > 2:379604/2‑148 (MQ=255) cgGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCAcc > 3:259363/1‑149 (MQ=255) cccATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAACACCTCg < 1:312887/149‑1 (MQ=255) ccATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGa > 1:264540/1‑149 (MQ=255) ttCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGc < 1:361393/149‑1 (MQ=255) | ATCCATGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGC > NC_002947/516546‑516840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |